RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-206ENST00000528302 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
SF3B2-206ENST00000528302 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
SF3B2-206ENST00000528302 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
SF3B2-206ENST00000528302 NEFLP07196 543 aa14.02□□□□□ -0.16
SF3B2-206ENST00000528302 CFTRP13569 1480 aa14□□□□□ -0.17
SF3B2-206ENST00000528302 NESP48681 1621 aa13.99□□□□□ -0.17
SF3B2-206ENST00000528302 ANP32EQ9BTT0 268 aa13.99□□□□□ -0.17
SF3B2-206ENST00000528302 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
SF3B2-206ENST00000528302 ARID3CA6NKF2 412 aa13.98□□□□□ -0.17
SF3B2-206ENST00000528302 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
SF3B2-206ENST00000528302 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
SF3B2-206ENST00000528302 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
SF3B2-206ENST00000528302 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.18
SF3B2-206ENST00000528302 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SF3B2-206ENST00000528302 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
SF3B2-206ENST00000528302 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
SF3B2-206ENST00000528302 ANP32CO43423 234 aa13.95□□□□□ -0.18
SF3B2-206ENST00000528302 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
SF3B2-206ENST00000528302 IGF1RP08069 1367 aa13.94□□□□□ -0.18
SF3B2-206ENST00000528302 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
SF3B2-206ENST00000528302 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
SF3B2-206ENST00000528302 ARXQ96QS3 562 aa13.91□□□□□ -0.18
SF3B2-206ENST00000528302 ARHGAP35Q9NRY4 1499 aa13.91□□□□□ -0.18
SF3B2-206ENST00000528302 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
SF3B2-206ENST00000528302 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
SF3B2-206ENST00000528302 PHLDB1Q86UU1 1377 aa13.88□□□□□ -0.19
SF3B2-206ENST00000528302 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
SF3B2-206ENST00000528302 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
SF3B2-206ENST00000528302 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
SF3B2-206ENST00000528302 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
SF3B2-206ENST00000528302 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
SF3B2-206ENST00000528302 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
SF3B2-206ENST00000528302 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
SF3B2-206ENST00000528302 PPP1R15AO75807 674 aaPredicted RBP13.84□□□□□ -0.19
SF3B2-206ENST00000528302 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
SF3B2-206ENST00000528302 FHOD3Q2V2M9 1422 aa13.84□□□□□ -0.19
SF3B2-206ENST00000528302 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
SF3B2-206ENST00000528302 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
SF3B2-206ENST00000528302 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
SF3B2-206ENST00000528302 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
SF3B2-206ENST00000528302 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
SF3B2-206ENST00000528302 RRP7BPQ9NSQ0 103 aa13.8□□□□□ -0.2
SF3B2-206ENST00000528302 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
SF3B2-206ENST00000528302 FOXD1Q16676 465 aa13.77□□□□□ -0.2
SF3B2-206ENST00000528302 MSH5O43196 834 aa13.75□□□□□ -0.21
SF3B2-206ENST00000528302 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-206ENST00000528302 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
SF3B2-206ENST00000528302 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
SF3B2-206ENST00000528302 LRRC9Q6ZRR7 1453 aa13.72□□□□□ -0.21
SF3B2-206ENST00000528302 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
SF3B2-206ENST00000528302 CDK11AQ9UQ88 783 aaPredicted RBP13.71□□□□□ -0.21
SF3B2-206ENST00000528302 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
SF3B2-206ENST00000528302 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
SF3B2-206ENST00000528302 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
SF3B2-206ENST00000528302 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
SF3B2-206ENST00000528302 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
SF3B2-206ENST00000528302 FBLN2P98095 1184 aa13.66□□□□□ -0.22
SF3B2-206ENST00000528302 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
SF3B2-206ENST00000528302 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
SF3B2-206ENST00000528302 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
SF3B2-206ENST00000528302 KCNA4P22459 653 aa13.66□□□□□ -0.22
SF3B2-206ENST00000528302 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
SF3B2-206ENST00000528302 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
SF3B2-206ENST00000528302 NBR1Q14596 966 aa13.63□□□□□ -0.23
SF3B2-206ENST00000528302 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
SF3B2-206ENST00000528302 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-206ENST00000528302 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
SF3B2-206ENST00000528302 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.237e-8■■■□□ 18.7
SF3B2-206ENST00000528302 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
SF3B2-206ENST00000528302 C11orf95C9JLR9 678 aaPredicted RBP13.6□□□□□ -0.23
SF3B2-206ENST00000528302 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
SF3B2-206ENST00000528302 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
SF3B2-206ENST00000528302 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
SF3B2-206ENST00000528302 CCDC18Q5T9S5 1454 aa13.59□□□□□ -0.23
SF3B2-206ENST00000528302 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
SF3B2-206ENST00000528302 EIF4G2P78344 907 aaKnown RBP eCLIP13.58□□□□□ -0.245e-14■□□□□ 8.2
SF3B2-206ENST00000528302 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
SF3B2-206ENST00000528302 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
SF3B2-206ENST00000528302 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
SF3B2-206ENST00000528302 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
SF3B2-206ENST00000528302 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
SF3B2-206ENST00000528302 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-206ENST00000528302 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
SF3B2-206ENST00000528302 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
SF3B2-206ENST00000528302 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
SF3B2-206ENST00000528302 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
SF3B2-206ENST00000528302 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-206ENST00000528302 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
SF3B2-206ENST00000528302 FMN1Q68DA7 1419 aa13.48□□□□□ -0.25
SF3B2-206ENST00000528302 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
SF3B2-206ENST00000528302 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-206ENST00000528302 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
SF3B2-206ENST00000528302 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-206ENST00000528302 NAIPQ13075 1403 aa13.47□□□□□ -0.25
SF3B2-206ENST00000528302 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
SF3B2-206ENST00000528302 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-206ENST00000528302 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
SF3B2-206ENST00000528302 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.26
SF3B2-206ENST00000528302 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms