RNA–Protein interactions for RNA: ENST00000528248.1

PKD2L1-203, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 1 (best)

Gene PKD2L1, Length 2,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-203ENST00000528248 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
PKD2L1-203ENST00000528248 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
PKD2L1-203ENST00000528248 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
PKD2L1-203ENST00000528248 CUL7Q14999 1698 aa22.09■■□□□ 1.13
PKD2L1-203ENST00000528248 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
PKD2L1-203ENST00000528248 ITGAEP38570 1179 aa22.07■■□□□ 1.12
PKD2L1-203ENST00000528248 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
PKD2L1-203ENST00000528248 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
PKD2L1-203ENST00000528248 NESP48681 1621 aa22.06■■□□□ 1.12
PKD2L1-203ENST00000528248 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
PKD2L1-203ENST00000528248 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
PKD2L1-203ENST00000528248 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
PKD2L1-203ENST00000528248 FYCO1Q9BQS8 1478 aa22.02■■□□□ 1.12
PKD2L1-203ENST00000528248 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
PKD2L1-203ENST00000528248 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
PKD2L1-203ENST00000528248 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
PKD2L1-203ENST00000528248 P3H3Q8IVL6 736 aa22■■□□□ 1.11
PKD2L1-203ENST00000528248 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
PKD2L1-203ENST00000528248 CASKIN1Q8WXD9 1431 aa21.99■■□□□ 1.11
PKD2L1-203ENST00000528248 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
PKD2L1-203ENST00000528248 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
PKD2L1-203ENST00000528248 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
PKD2L1-203ENST00000528248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
PKD2L1-203ENST00000528248 FAM50AQ14320 339 aaKnown RBP21.93■■□□□ 1.1
PKD2L1-203ENST00000528248 ATP1B4Q9UN42 357 aaPredicted RBP21.93■■□□□ 1.1
PKD2L1-203ENST00000528248 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
PKD2L1-203ENST00000528248 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
PKD2L1-203ENST00000528248 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
PKD2L1-203ENST00000528248 SNAPC4Q5SXM2 1469 aa21.85■■□□□ 1.09
PKD2L1-203ENST00000528248 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
PKD2L1-203ENST00000528248 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
PKD2L1-203ENST00000528248 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.08
PKD2L1-203ENST00000528248 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
PKD2L1-203ENST00000528248 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
PKD2L1-203ENST00000528248 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
PKD2L1-203ENST00000528248 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
PKD2L1-203ENST00000528248 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
PKD2L1-203ENST00000528248 SIN3AQ96ST3 1273 aa21.74■■□□□ 1.07
PKD2L1-203ENST00000528248 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
PKD2L1-203ENST00000528248 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
PKD2L1-203ENST00000528248 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
PKD2L1-203ENST00000528248 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
PKD2L1-203ENST00000528248 SUPT6HQ7KZ85 1726 aaKnown RBP21.67■■□□□ 1.06
PKD2L1-203ENST00000528248 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
PKD2L1-203ENST00000528248 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
PKD2L1-203ENST00000528248 EHBP1L1Q8N3D4 1523 aa21.66■■□□□ 1.06
PKD2L1-203ENST00000528248 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
PKD2L1-203ENST00000528248 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
PKD2L1-203ENST00000528248 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
PKD2L1-203ENST00000528248 PTPRKQ15262 1439 aa21.63■■□□□ 1.05
PKD2L1-203ENST00000528248 PTPN23Q9H3S7 1636 aa21.62■■□□□ 1.05
PKD2L1-203ENST00000528248 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
PKD2L1-203ENST00000528248 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
PKD2L1-203ENST00000528248 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
PKD2L1-203ENST00000528248 UGGT2Q9NYU1 1516 aa21.59■■□□□ 1.05
PKD2L1-203ENST00000528248 NAIPQ13075 1403 aa21.57■■□□□ 1.04
PKD2L1-203ENST00000528248 HECW1Q76N89 1606 aa21.56■■□□□ 1.04
PKD2L1-203ENST00000528248 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
PKD2L1-203ENST00000528248 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
PKD2L1-203ENST00000528248 MAGI3Q5TCQ9 1506 aa21.54■■□□□ 1.04
PKD2L1-203ENST00000528248 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
PKD2L1-203ENST00000528248 TONSLQ96HA7 1378 aa21.53■■□□□ 1.04
PKD2L1-203ENST00000528248 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.04
PKD2L1-203ENST00000528248 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
PKD2L1-203ENST00000528248 EPRSP07814 1512 aaKnown RBP21.48■■□□□ 1.03
PKD2L1-203ENST00000528248 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
PKD2L1-203ENST00000528248 SUPT16HQ9Y5B9 1047 aaKnown RBP21.46■■□□□ 1.03
PKD2L1-203ENST00000528248 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
PKD2L1-203ENST00000528248 AKNAQ7Z591 1439 aa21.44■■□□□ 1.02
PKD2L1-203ENST00000528248 MIA2Q96PC5 1412 aa21.44■■□□□ 1.02
PKD2L1-203ENST00000528248 WDR62O43379 1518 aa21.44■■□□□ 1.02
PKD2L1-203ENST00000528248 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
PKD2L1-203ENST00000528248 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
PKD2L1-203ENST00000528248 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
PKD2L1-203ENST00000528248 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
PKD2L1-203ENST00000528248 RRP7BPQ9NSQ0 103 aa21.38■■□□□ 1.01
PKD2L1-203ENST00000528248 ANP32CO43423 234 aa21.37■■□□□ 1.01
PKD2L1-203ENST00000528248 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
PKD2L1-203ENST00000528248 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
PKD2L1-203ENST00000528248 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
PKD2L1-203ENST00000528248 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
PKD2L1-203ENST00000528248 KIAA0556O60303 1618 aa21.32■■□□□ 1
PKD2L1-203ENST00000528248 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
PKD2L1-203ENST00000528248 DISP1Q96F81 1524 aa21.31■■□□□ 1
PKD2L1-203ENST00000528248 TRIM52Q96A61 297 aa21.3■■□□□ 1
PKD2L1-203ENST00000528248 KDM6BO15054 1643 aa21.3■■□□□ 1
PKD2L1-203ENST00000528248 ROCK1Q13464 1354 aa21.28■■□□□ 1
PKD2L1-203ENST00000528248 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
PKD2L1-203ENST00000528248 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
PKD2L1-203ENST00000528248 NUP153P49790 1475 aaKnown RBP21.25■□□□□ 0.99
PKD2L1-203ENST00000528248 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
PKD2L1-203ENST00000528248 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
PKD2L1-203ENST00000528248 DAPK1P53355 1430 aa21.25■□□□□ 0.99
PKD2L1-203ENST00000528248 DNMT1P26358 1616 aaKnown RBP21.23■□□□□ 0.99
PKD2L1-203ENST00000528248 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
PKD2L1-203ENST00000528248 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
PKD2L1-203ENST00000528248 ABCC5O15440 1437 aa21.2■□□□□ 0.98
PKD2L1-203ENST00000528248 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
PKD2L1-203ENST00000528248 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
PKD2L1-203ENST00000528248 EIF4G2P78344 907 aaKnown RBP eCLIP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms