RNA–Protein interactions for RNA: ENST00000527944.1

NCAPD3-206, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 2

Gene NCAPD3, Length 773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-206ENST00000527944 IGF1RP08069 1367 aa17.1■□□□□ 0.33
NCAPD3-206ENST00000527944 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-206ENST00000527944 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
NCAPD3-206ENST00000527944 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
NCAPD3-206ENST00000527944 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
NCAPD3-206ENST00000527944 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
NCAPD3-206ENST00000527944 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
NCAPD3-206ENST00000527944 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
NCAPD3-206ENST00000527944 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
NCAPD3-206ENST00000527944 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
NCAPD3-206ENST00000527944 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
NCAPD3-206ENST00000527944 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
NCAPD3-206ENST00000527944 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
NCAPD3-206ENST00000527944 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
NCAPD3-206ENST00000527944 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
NCAPD3-206ENST00000527944 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
NCAPD3-206ENST00000527944 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
NCAPD3-206ENST00000527944 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
NCAPD3-206ENST00000527944 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
NCAPD3-206ENST00000527944 EFCAB5A4FU69 1503 aa16.88■□□□□ 0.29
NCAPD3-206ENST00000527944 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
NCAPD3-206ENST00000527944 APLP2Q06481 763 aa16.87■□□□□ 0.29
NCAPD3-206ENST00000527944 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.296e-7■■■■■ 36.6
NCAPD3-206ENST00000527944 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
NCAPD3-206ENST00000527944 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
NCAPD3-206ENST00000527944 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
NCAPD3-206ENST00000527944 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
NCAPD3-206ENST00000527944 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.28
NCAPD3-206ENST00000527944 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
NCAPD3-206ENST00000527944 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
NCAPD3-206ENST00000527944 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
NCAPD3-206ENST00000527944 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
NCAPD3-206ENST00000527944 PCF11O94913 1555 aaKnown RBP16.71■□□□□ 0.27
NCAPD3-206ENST00000527944 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
NCAPD3-206ENST00000527944 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
NCAPD3-206ENST00000527944 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
NCAPD3-206ENST00000527944 MAP3K1Q13233 1512 aa16.69■□□□□ 0.26
NCAPD3-206ENST00000527944 FHOD3Q2V2M9 1422 aa16.69■□□□□ 0.26
NCAPD3-206ENST00000527944 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
NCAPD3-206ENST00000527944 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
NCAPD3-206ENST00000527944 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
NCAPD3-206ENST00000527944 ZBTB22O15209 634 aa16.65■□□□□ 0.26
NCAPD3-206ENST00000527944 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
NCAPD3-206ENST00000527944 KIAA0586Q9BVV6 1533 aa16.65■□□□□ 0.26
NCAPD3-206ENST00000527944 UGGT2Q9NYU1 1516 aa16.64■□□□□ 0.25
NCAPD3-206ENST00000527944 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
NCAPD3-206ENST00000527944 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
NCAPD3-206ENST00000527944 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
NCAPD3-206ENST00000527944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■■□ 23.4
NCAPD3-206ENST00000527944 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
NCAPD3-206ENST00000527944 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
NCAPD3-206ENST00000527944 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
NCAPD3-206ENST00000527944 HRCP23327 699 aa16.57■□□□□ 0.24
NCAPD3-206ENST00000527944 NUP160Q12769 1436 aa16.56■□□□□ 0.24
NCAPD3-206ENST00000527944 CHD1O14646 1710 aa16.54■□□□□ 0.24
NCAPD3-206ENST00000527944 FBLN2P98095 1184 aa16.54■□□□□ 0.24
NCAPD3-206ENST00000527944 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
NCAPD3-206ENST00000527944 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
NCAPD3-206ENST00000527944 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
NCAPD3-206ENST00000527944 KANK4Q5T7N3 995 aaPredicted RBP16.5■□□□□ 0.23
NCAPD3-206ENST00000527944 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
NCAPD3-206ENST00000527944 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
NCAPD3-206ENST00000527944 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
NCAPD3-206ENST00000527944 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
NCAPD3-206ENST00000527944 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
NCAPD3-206ENST00000527944 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
NCAPD3-206ENST00000527944 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
NCAPD3-206ENST00000527944 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
NCAPD3-206ENST00000527944 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
NCAPD3-206ENST00000527944 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
NCAPD3-206ENST00000527944 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
NCAPD3-206ENST00000527944 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-206ENST00000527944 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
NCAPD3-206ENST00000527944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-206ENST00000527944 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
NCAPD3-206ENST00000527944 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
NCAPD3-206ENST00000527944 CDK13Q14004 1512 aaKnown RBP16.34■□□□□ 0.21
NCAPD3-206ENST00000527944 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
NCAPD3-206ENST00000527944 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
NCAPD3-206ENST00000527944 NUP153P49790 1475 aaKnown RBP16.31■□□□□ 0.2
NCAPD3-206ENST00000527944 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
NCAPD3-206ENST00000527944 ABCA8O94911 1581 aa16.3■□□□□ 0.2
NCAPD3-206ENST00000527944 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
NCAPD3-206ENST00000527944 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-206ENST00000527944 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
NCAPD3-206ENST00000527944 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
NCAPD3-206ENST00000527944 PLB1Q6P1J6 1458 aa16.27■□□□□ 0.19
NCAPD3-206ENST00000527944 ADCY10Q96PN6 1610 aa16.24■□□□□ 0.19
NCAPD3-206ENST00000527944 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
NCAPD3-206ENST00000527944 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
NCAPD3-206ENST00000527944 PTPRGP23470 1445 aa16.23■□□□□ 0.19
NCAPD3-206ENST00000527944 ITSN2Q9NZM3 1697 aa16.23■□□□□ 0.19
NCAPD3-206ENST00000527944 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
NCAPD3-206ENST00000527944 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
NCAPD3-206ENST00000527944 ITGAEP38570 1179 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms