RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
PTPMT1-204ENST00000527079 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
PTPMT1-204ENST00000527079 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
PTPMT1-204ENST00000527079 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
PTPMT1-204ENST00000527079 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
PTPMT1-204ENST00000527079 CTTNBP2Q8WZ74 1663 aa15.88■□□□□ 0.13
PTPMT1-204ENST00000527079 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
PTPMT1-204ENST00000527079 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.138e-7■■■■□ 24
PTPMT1-204ENST00000527079 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
PTPMT1-204ENST00000527079 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
PTPMT1-204ENST00000527079 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
PTPMT1-204ENST00000527079 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
PTPMT1-204ENST00000527079 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
PTPMT1-204ENST00000527079 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
PTPMT1-204ENST00000527079 FHOD3Q2V2M9 1422 aa15.8■□□□□ 0.12
PTPMT1-204ENST00000527079 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
PTPMT1-204ENST00000527079 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
PTPMT1-204ENST00000527079 MIER1Q8N108 512 aa15.78■□□□□ 0.12
PTPMT1-204ENST00000527079 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
PTPMT1-204ENST00000527079 ITGAEP38570 1179 aa15.77■□□□□ 0.12
PTPMT1-204ENST00000527079 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
PTPMT1-204ENST00000527079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.11
PTPMT1-204ENST00000527079 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
PTPMT1-204ENST00000527079 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
PTPMT1-204ENST00000527079 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
PTPMT1-204ENST00000527079 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
PTPMT1-204ENST00000527079 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
PTPMT1-204ENST00000527079 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
PTPMT1-204ENST00000527079 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
PTPMT1-204ENST00000527079 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
PTPMT1-204ENST00000527079 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
PTPMT1-204ENST00000527079 FAM50AQ14320 339 aaKnown RBP15.7■□□□□ 0.1
PTPMT1-204ENST00000527079 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
PTPMT1-204ENST00000527079 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
PTPMT1-204ENST00000527079 FGD6Q6ZV73 1430 aa15.65■□□□□ 0.1
PTPMT1-204ENST00000527079 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
PTPMT1-204ENST00000527079 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
PTPMT1-204ENST00000527079 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
PTPMT1-204ENST00000527079 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
PTPMT1-204ENST00000527079 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
PTPMT1-204ENST00000527079 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
PTPMT1-204ENST00000527079 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
PTPMT1-204ENST00000527079 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
PTPMT1-204ENST00000527079 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
PTPMT1-204ENST00000527079 CCDC18Q5T9S5 1454 aa15.58■□□□□ 0.08
PTPMT1-204ENST00000527079 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
PTPMT1-204ENST00000527079 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
PTPMT1-204ENST00000527079 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
PTPMT1-204ENST00000527079 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
PTPMT1-204ENST00000527079 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
PTPMT1-204ENST00000527079 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
PTPMT1-204ENST00000527079 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
PTPMT1-204ENST00000527079 HECW1Q76N89 1606 aa15.54■□□□□ 0.08
PTPMT1-204ENST00000527079 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
PTPMT1-204ENST00000527079 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.07
PTPMT1-204ENST00000527079 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
PTPMT1-204ENST00000527079 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
PTPMT1-204ENST00000527079 PTPRKQ15262 1439 aa15.5■□□□□ 0.07
PTPMT1-204ENST00000527079 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
PTPMT1-204ENST00000527079 TCOF1Q13428 1488 aaKnown RBP15.48■□□□□ 0.07
PTPMT1-204ENST00000527079 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
PTPMT1-204ENST00000527079 NAIPQ13075 1403 aa15.47■□□□□ 0.07
PTPMT1-204ENST00000527079 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
PTPMT1-204ENST00000527079 WDR62O43379 1518 aa15.46■□□□□ 0.07
PTPMT1-204ENST00000527079 PPP1R15AO75807 674 aaPredicted RBP15.46■□□□□ 0.07
PTPMT1-204ENST00000527079 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
PTPMT1-204ENST00000527079 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
PTPMT1-204ENST00000527079 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
PTPMT1-204ENST00000527079 GCC2Q8IWJ2 1684 aa15.42■□□□□ 0.06
PTPMT1-204ENST00000527079 KIAA0586Q9BVV6 1533 aa15.41■□□□□ 0.06
PTPMT1-204ENST00000527079 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
PTPMT1-204ENST00000527079 KIAA0556O60303 1618 aa15.38■□□□□ 0.05
PTPMT1-204ENST00000527079 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
PTPMT1-204ENST00000527079 DISP1Q96F81 1524 aa15.35■□□□□ 0.05
PTPMT1-204ENST00000527079 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
PTPMT1-204ENST00000527079 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
PTPMT1-204ENST00000527079 DDX10Q13206 875 aaKnown RBP15.34■□□□□ 0.05
PTPMT1-204ENST00000527079 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
PTPMT1-204ENST00000527079 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
PTPMT1-204ENST00000527079 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
PTPMT1-204ENST00000527079 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
PTPMT1-204ENST00000527079 NUP153P49790 1475 aaKnown RBP15.3■□□□□ 0.04
PTPMT1-204ENST00000527079 KDM5BQ9UGL1 1544 aa15.3■□□□□ 0.04
PTPMT1-204ENST00000527079 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
PTPMT1-204ENST00000527079 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
PTPMT1-204ENST00000527079 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
PTPMT1-204ENST00000527079 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
PTPMT1-204ENST00000527079 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
PTPMT1-204ENST00000527079 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
PTPMT1-204ENST00000527079 DAPK1P53355 1430 aa15.26■□□□□ 0.03
PTPMT1-204ENST00000527079 KDM6BO15054 1643 aa15.26■□□□□ 0.03
PTPMT1-204ENST00000527079 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
PTPMT1-204ENST00000527079 ANP32CO43423 234 aa15.25■□□□□ 0.03
PTPMT1-204ENST00000527079 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
PTPMT1-204ENST00000527079 KCNH8Q96L42 1107 aa15.24■□□□□ 0.03
PTPMT1-204ENST00000527079 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
PTPMT1-204ENST00000527079 AEBP2Q6ZN18 517 aaPredicted RBP15.23■□□□□ 0.03
PTPMT1-204ENST00000527079 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
PTPMT1-204ENST00000527079 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
PTPMT1-204ENST00000527079 ABCC5O15440 1437 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms