RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
PABPC4-220ENST00000525669 CHD1O14646 1710 aa13.85□□□□□ -0.19
PABPC4-220ENST00000525669 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
PABPC4-220ENST00000525669 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
PABPC4-220ENST00000525669 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
PABPC4-220ENST00000525669 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
PABPC4-220ENST00000525669 FBLN2P98095 1184 aa13.81□□□□□ -0.2
PABPC4-220ENST00000525669 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
PABPC4-220ENST00000525669 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
PABPC4-220ENST00000525669 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
PABPC4-220ENST00000525669 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
PABPC4-220ENST00000525669 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
PABPC4-220ENST00000525669 VPS8Q8N3P4 1428 aa13.78□□□□□ -0.2
PABPC4-220ENST00000525669 SAMD9Q5K651 1589 aa13.77□□□□□ -0.21
PABPC4-220ENST00000525669 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
PABPC4-220ENST00000525669 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
PABPC4-220ENST00000525669 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
PABPC4-220ENST00000525669 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
PABPC4-220ENST00000525669 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
PABPC4-220ENST00000525669 NUP160Q12769 1436 aa13.7□□□□□ -0.22
PABPC4-220ENST00000525669 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
PABPC4-220ENST00000525669 KIAA0556O60303 1618 aa13.68□□□□□ -0.22
PABPC4-220ENST00000525669 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
PABPC4-220ENST00000525669 DISP1Q96F81 1524 aa13.64□□□□□ -0.23
PABPC4-220ENST00000525669 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
PABPC4-220ENST00000525669 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
PABPC4-220ENST00000525669 APLP2Q06481 763 aa13.63□□□□□ -0.23
PABPC4-220ENST00000525669 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
PABPC4-220ENST00000525669 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
PABPC4-220ENST00000525669 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
PABPC4-220ENST00000525669 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
PABPC4-220ENST00000525669 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
PABPC4-220ENST00000525669 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
PABPC4-220ENST00000525669 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
PABPC4-220ENST00000525669 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
PABPC4-220ENST00000525669 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
PABPC4-220ENST00000525669 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
PABPC4-220ENST00000525669 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
PABPC4-220ENST00000525669 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
PABPC4-220ENST00000525669 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
PABPC4-220ENST00000525669 RAPGEF6Q8TEU7 1601 aa13.54□□□□□ -0.24
PABPC4-220ENST00000525669 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
PABPC4-220ENST00000525669 MAP3K1Q13233 1512 aa13.53□□□□□ -0.24
PABPC4-220ENST00000525669 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
PABPC4-220ENST00000525669 LRRC9Q6ZRR7 1453 aa13.5□□□□□ -0.25
PABPC4-220ENST00000525669 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
PABPC4-220ENST00000525669 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
PABPC4-220ENST00000525669 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
PABPC4-220ENST00000525669 ABCA8O94911 1581 aa13.46□□□□□ -0.25
PABPC4-220ENST00000525669 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
PABPC4-220ENST00000525669 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
PABPC4-220ENST00000525669 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
PABPC4-220ENST00000525669 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
PABPC4-220ENST00000525669 PTPRGP23470 1445 aa13.42□□□□□ -0.26
PABPC4-220ENST00000525669 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
PABPC4-220ENST00000525669 EHBP1L1Q8N3D4 1523 aa13.42□□□□□ -0.26
PABPC4-220ENST00000525669 MTUS2Q5JR59 1369 aa13.41□□□□□ -0.26
PABPC4-220ENST00000525669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
PABPC4-220ENST00000525669 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
PABPC4-220ENST00000525669 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
PABPC4-220ENST00000525669 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
PABPC4-220ENST00000525669 UACAQ9BZF9 1416 aa13.35□□□□□ -0.27
PABPC4-220ENST00000525669 ATP10BO94823 1461 aa13.35□□□□□ -0.27
PABPC4-220ENST00000525669 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
PABPC4-220ENST00000525669 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
PABPC4-220ENST00000525669 KIF14Q15058 1648 aa13.34□□□□□ -0.27
PABPC4-220ENST00000525669 ZCCHC11Q5TAX3 1644 aaKnown RBP13.33□□□□□ -0.28
PABPC4-220ENST00000525669 ARHGEF11O15085 1522 aa13.33□□□□□ -0.28
PABPC4-220ENST00000525669 ADCY10Q96PN6 1610 aa13.32□□□□□ -0.28
PABPC4-220ENST00000525669 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
PABPC4-220ENST00000525669 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
PABPC4-220ENST00000525669 PTPN23Q9H3S7 1636 aa13.28□□□□□ -0.28
PABPC4-220ENST00000525669 ITGAEP38570 1179 aa13.28□□□□□ -0.28
PABPC4-220ENST00000525669 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
PABPC4-220ENST00000525669 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
PABPC4-220ENST00000525669 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
PABPC4-220ENST00000525669 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
PABPC4-220ENST00000525669 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
PABPC4-220ENST00000525669 ITSN2Q9NZM3 1697 aa13.27□□□□□ -0.29
PABPC4-220ENST00000525669 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
PABPC4-220ENST00000525669 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
PABPC4-220ENST00000525669 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
PABPC4-220ENST00000525669 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
PABPC4-220ENST00000525669 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
PABPC4-220ENST00000525669 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
PABPC4-220ENST00000525669 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
PABPC4-220ENST00000525669 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.3
PABPC4-220ENST00000525669 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.3
PABPC4-220ENST00000525669 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
PABPC4-220ENST00000525669 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
PABPC4-220ENST00000525669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
PABPC4-220ENST00000525669 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
PABPC4-220ENST00000525669 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
PABPC4-220ENST00000525669 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
PABPC4-220ENST00000525669 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
PABPC4-220ENST00000525669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPC4-220ENST00000525669 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
PABPC4-220ENST00000525669 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-220ENST00000525669 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
PABPC4-220ENST00000525669 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms