RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-208ENST00000525599 SHROOM2Q13796 1616 aa36.39■■■■□ 3.42
CCDC17-208ENST00000525599 CTTNBP2Q8WZ74 1663 aa36.34■■■■□ 3.41
CCDC17-208ENST00000525599 IQGAP2Q13576 1575 aa36.33■■■■□ 3.41
CCDC17-208ENST00000525599 GOLGA3Q08378 1498 aa36.3■■■■□ 3.4
CCDC17-208ENST00000525599 ARHGEF11O15085 1522 aa36.3■■■■□ 3.4
CCDC17-208ENST00000525599 JPH4Q96JJ6 628 aa36.28■■■■□ 3.4
CCDC17-208ENST00000525599 RIMBP3CA6NJZ7 1639 aa36.23■■■■□ 3.39
CCDC17-208ENST00000525599 RIMBP3BA6NNM3 1639 aa36.23■■■■□ 3.39
CCDC17-208ENST00000525599 RIMBP3Q9UFD9 1639 aa36.23■■■■□ 3.39
CCDC17-208ENST00000525599 PRG4Q92954 1404 aaPredicted RBP36.18■■■■□ 3.38
CCDC17-208ENST00000525599 UGGT2Q9NYU1 1516 aa36.17■■■■□ 3.38
CCDC17-208ENST00000525599 ERCC6L2Q5T890 1561 aa36.09■■■■□ 3.37
CCDC17-208ENST00000525599 UBTFP17480 764 aaKnown RBP36.08■■■■□ 3.37
CCDC17-208ENST00000525599 CARMIL2Q6F5E8 1435 aa36.07■■■■□ 3.37
CCDC17-208ENST00000525599 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
CCDC17-208ENST00000525599 DISP1Q96F81 1524 aa36.02■■■■□ 3.36
CCDC17-208ENST00000525599 EHMT2Q96KQ7 1210 aa35.99■■■■□ 3.35
CCDC17-208ENST00000525599 KIAA0556O60303 1618 aa35.97■■■■□ 3.35
CCDC17-208ENST00000525599 TNIKQ9UKE5 1360 aa35.92■■■■□ 3.34
CCDC17-208ENST00000525599 SAMD9Q5K651 1589 aa35.91■■■■□ 3.34
CCDC17-208ENST00000525599 EFCAB5A4FU69 1503 aa35.88■■■■□ 3.33
CCDC17-208ENST00000525599 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
CCDC17-208ENST00000525599 PTPRGP23470 1445 aa35.82■■■■□ 3.33
CCDC17-208ENST00000525599 RANGAP1P46060 587 aaPredicted RBP35.73■■■■□ 3.31
CCDC17-208ENST00000525599 LOC105371045A0A1W2PR82 267 aa35.71■■■■□ 3.31
CCDC17-208ENST00000525599 ARHGAP35Q9NRY4 1499 aa35.69■■■■□ 3.3
CCDC17-208ENST00000525599 P3H3Q8IVL6 736 aa35.65■■■■□ 3.3
CCDC17-208ENST00000525599 CLIP1P30622 1438 aa35.63■■■■□ 3.29
CCDC17-208ENST00000525599 FHOD3Q2V2M9 1422 aa35.63■■■■□ 3.29
CCDC17-208ENST00000525599 UACAQ9BZF9 1416 aa35.62■■■■□ 3.29
CCDC17-208ENST00000525599 UHRF1BP1LA0JNW5 1464 aa35.61■■■■□ 3.29
CCDC17-208ENST00000525599 TTBK1Q5TCY1 1321 aaPredicted RBP35.6■■■■□ 3.29
CCDC17-208ENST00000525599 ADCY10Q96PN6 1610 aa35.58■■■■□ 3.29
CCDC17-208ENST00000525599 CEP162Q5TB80 1403 aa35.58■■■■□ 3.29
CCDC17-208ENST00000525599 ABCC2Q92887 1545 aa35.56■■■■□ 3.28
CCDC17-208ENST00000525599 ABCA8O94911 1581 aa35.55■■■■□ 3.28
CCDC17-208ENST00000525599 FMN1Q68DA7 1419 aa35.52■■■■□ 3.28
CCDC17-208ENST00000525599 PLB1Q6P1J6 1458 aa35.52■■■■□ 3.28
CCDC17-208ENST00000525599 RAPGEF6Q8TEU7 1601 aa35.45■■■■□ 3.26
CCDC17-208ENST00000525599 NPM1P06748 294 aaKnown RBP eCLIP35.41■■■■□ 3.26
CCDC17-208ENST00000525599 KDM5BQ9UGL1 1544 aa35.41■■■■□ 3.26
CCDC17-208ENST00000525599 MAPKBP1O60336 1514 aa35.33■■■■□ 3.25
CCDC17-208ENST00000525599 NUP153P49790 1475 aaKnown RBP35.31■■■■□ 3.24
CCDC17-208ENST00000525599 ZCCHC11Q5TAX3 1644 aaKnown RBP35.3■■■■□ 3.24
CCDC17-208ENST00000525599 HECW1Q76N89 1606 aa35.28■■■■□ 3.24
CCDC17-208ENST00000525599 CASKIN1Q8WXD9 1431 aa35.27■■■■□ 3.24
CCDC17-208ENST00000525599 ATP10BO94823 1461 aa35.23■■■■□ 3.23
CCDC17-208ENST00000525599 FYCO1Q9BQS8 1478 aa35.23■■■■□ 3.23
CCDC17-208ENST00000525599 PCF11O94913 1555 aaKnown RBP35.22■■■■□ 3.23
CCDC17-208ENST00000525599 ASXL2Q76L83 1435 aa35.16■■■■□ 3.22
CCDC17-208ENST00000525599 VPS8Q8N3P4 1428 aa35.15■■■■□ 3.22
CCDC17-208ENST00000525599 EPRSP07814 1512 aaKnown RBP35.14■■■■□ 3.22
CCDC17-208ENST00000525599 CCDC18Q5T9S5 1454 aa35.11■■■■□ 3.21
CCDC17-208ENST00000525599 WDR7Q9Y4E6 1490 aa35.1■■■■□ 3.21
CCDC17-208ENST00000525599 ATP1B4Q9UN42 357 aaPredicted RBP35.09■■■■□ 3.21
CCDC17-208ENST00000525599 ARID3CA6NKF2 412 aa35.08■■■■□ 3.21
CCDC17-208ENST00000525599 ABCC10Q5T3U5 1492 aa35.07■■■■□ 3.2
CCDC17-208ENST00000525599 CDK13Q14004 1512 aaKnown RBP35.06■■■■□ 3.2
CCDC17-208ENST00000525599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.06■■■■□ 3.2
CCDC17-208ENST00000525599 HNRNPUL2Q1KMD3 747 aaKnown RBP35.06■■■■□ 3.2
CCDC17-208ENST00000525599 LRRIQ1Q96JM4 1722 aa35.05■■■■□ 3.2
CCDC17-208ENST00000525599 DIP2BQ9P265 1576 aa35.02■■■■□ 3.2
CCDC17-208ENST00000525599 CDK11AQ9UQ88 783 aaPredicted RBP34.99■■■■□ 3.19
CCDC17-208ENST00000525599 PLEKHD1A6NEE1 506 aa34.98■■■■□ 3.19
CCDC17-208ENST00000525599 GLI2P10070 1586 aa34.97■■■■□ 3.19
CCDC17-208ENST00000525599 KIF13AQ9H1H9 1805 aa34.96■■■■□ 3.19
CCDC17-208ENST00000525599 TRHP20396 242 aaPredicted RBP34.96■■■■□ 3.19
CCDC17-208ENST00000525599 FAM69CQ0P6D2 419 aa34.9■■■■□ 3.18
CCDC17-208ENST00000525599 TROQ12816 1431 aaPredicted RBP34.86■■■■□ 3.17
CCDC17-208ENST00000525599 MAP3K1Q13233 1512 aa34.86■■■■□ 3.17
CCDC17-208ENST00000525599 CFAP43Q8NDM7 1665 aa34.85■■■■□ 3.17
CCDC17-208ENST00000525599 KCNH8Q96L42 1107 aa34.83■■■■□ 3.17
CCDC17-208ENST00000525599 TIAM1Q13009 1591 aa34.82■■■■□ 3.16
CCDC17-208ENST00000525599 ABCA9Q8IUA7 1624 aa34.79■■■■□ 3.16
CCDC17-208ENST00000525599 MAP3K4Q9Y6R4 1608 aa34.79■■■■□ 3.16
CCDC17-208ENST00000525599 MAGI3Q5TCQ9 1506 aa34.78■■■■□ 3.16
CCDC17-208ENST00000525599 KIF14Q15058 1648 aa34.76■■■■□ 3.15
CCDC17-208ENST00000525599 EHBP1L1Q8N3D4 1523 aa34.73■■■■□ 3.15
CCDC17-208ENST00000525599 MTUS2Q5JR59 1369 aa34.73■■■■□ 3.15
CCDC17-208ENST00000525599 APLP2Q06481 763 aa34.72■■■■□ 3.15
CCDC17-208ENST00000525599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.7■■■■□ 3.15
CCDC17-208ENST00000525599 CD109Q6YHK3 1445 aa34.7■■■■□ 3.14
CCDC17-208ENST00000525599 LRRC9Q6ZRR7 1453 aa34.66■■■■□ 3.14
CCDC17-208ENST00000525599 TTC37Q6PGP7 1564 aa34.65■■■■□ 3.14
CCDC17-208ENST00000525599 TEX14Q8IWB6 1497 aa34.63■■■■□ 3.13
CCDC17-208ENST00000525599 PPRC1Q5VV67 1664 aaKnown RBP34.63■■■■□ 3.13
CCDC17-208ENST00000525599 TSPOAP1O95153 1857 aa34.63■■■■□ 3.13
CCDC17-208ENST00000525599 SUPT6HQ7KZ85 1726 aaKnown RBP34.56■■■■□ 3.12
CCDC17-208ENST00000525599 ARAP3Q8WWN8 1544 aa34.56■■■■□ 3.12
CCDC17-208ENST00000525599 MYO5CQ9NQX4 1742 aa34.55■■■■□ 3.12
CCDC17-208ENST00000525599 PLCH2O75038 1416 aa34.54■■■■□ 3.12
CCDC17-208ENST00000525599 KANK4Q5T7N3 995 aaPredicted RBP34.52■■■■□ 3.12
CCDC17-208ENST00000525599 PHLDB1Q86UU1 1377 aa34.49■■■■□ 3.11
CCDC17-208ENST00000525599 NCOA2Q15596 1464 aa34.48■■■■□ 3.11
CCDC17-208ENST00000525599 NEO1Q92859 1461 aa34.48■■■■□ 3.11
CCDC17-208ENST00000525599 CFAP74Q9C0B2 1584 aa34.48■■■■□ 3.11
CCDC17-208ENST00000525599 PREX2Q70Z35 1606 aa34.47■■■■□ 3.11
CCDC17-208ENST00000525599 CDC42BPAQ5VT25 1732 aa34.45■■■■□ 3.11
CCDC17-208ENST00000525599 CCNB3Q8WWL7 1395 aa34.44■■■■□ 3.1
CCDC17-208ENST00000525599 GPATCH8Q9UKJ3 1502 aaKnown RBP34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms