RNA–Protein interactions for RNA: ENST00000525413.5

CHRDL2-204, Transcript of chordin like 2, humanhuman

TSL 5

Gene CHRDL2, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-204ENST00000525413 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
CHRDL2-204ENST00000525413 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
CHRDL2-204ENST00000525413 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
CHRDL2-204ENST00000525413 KIAA0586Q9BVV6 1533 aa22.6■■□□□ 1.21
CHRDL2-204ENST00000525413 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
CHRDL2-204ENST00000525413 CTTNBP2Q8WZ74 1663 aa22.57■■□□□ 1.2
CHRDL2-204ENST00000525413 IQGAP2Q13576 1575 aa22.54■■□□□ 1.2
CHRDL2-204ENST00000525413 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
CHRDL2-204ENST00000525413 UBTFP17480 764 aaKnown RBP22.49■■□□□ 1.19
CHRDL2-204ENST00000525413 JPH4Q96JJ6 628 aa22.48■■□□□ 1.19
CHRDL2-204ENST00000525413 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
CHRDL2-204ENST00000525413 UGGT2Q9NYU1 1516 aa22.42■■□□□ 1.18
CHRDL2-204ENST00000525413 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
CHRDL2-204ENST00000525413 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
CHRDL2-204ENST00000525413 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
CHRDL2-204ENST00000525413 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
CHRDL2-204ENST00000525413 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
CHRDL2-204ENST00000525413 LOC105371045A0A1W2PR82 267 aa22.32■■□□□ 1.16
CHRDL2-204ENST00000525413 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
CHRDL2-204ENST00000525413 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
CHRDL2-204ENST00000525413 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
CHRDL2-204ENST00000525413 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
CHRDL2-204ENST00000525413 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
CHRDL2-204ENST00000525413 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
CHRDL2-204ENST00000525413 CLIP1P30622 1438 aa22.2■■□□□ 1.14
CHRDL2-204ENST00000525413 PTPRGP23470 1445 aa22.19■■□□□ 1.14
CHRDL2-204ENST00000525413 ARHGAP35Q9NRY4 1499 aa22.18■■□□□ 1.14
CHRDL2-204ENST00000525413 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
CHRDL2-204ENST00000525413 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
CHRDL2-204ENST00000525413 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
CHRDL2-204ENST00000525413 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
CHRDL2-204ENST00000525413 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
CHRDL2-204ENST00000525413 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
CHRDL2-204ENST00000525413 UHRF1BP1LA0JNW5 1464 aa22.04■■□□□ 1.12
CHRDL2-204ENST00000525413 ABCA8O94911 1581 aa22.03■■□□□ 1.12
CHRDL2-204ENST00000525413 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
CHRDL2-204ENST00000525413 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
CHRDL2-204ENST00000525413 RAPGEF6Q8TEU7 1601 aa22■■□□□ 1.11
CHRDL2-204ENST00000525413 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
CHRDL2-204ENST00000525413 NPM1P06748 294 aaKnown RBP eCLIP21.94■■□□□ 1.1
CHRDL2-204ENST00000525413 HECW1Q76N89 1606 aa21.92■■□□□ 1.1
CHRDL2-204ENST00000525413 CASKIN1Q8WXD9 1431 aa21.92■■□□□ 1.1
CHRDL2-204ENST00000525413 KDM5BQ9UGL1 1544 aa21.91■■□□□ 1.1
CHRDL2-204ENST00000525413 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
CHRDL2-204ENST00000525413 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
CHRDL2-204ENST00000525413 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
CHRDL2-204ENST00000525413 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
CHRDL2-204ENST00000525413 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
CHRDL2-204ENST00000525413 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
CHRDL2-204ENST00000525413 ATP10BO94823 1461 aa21.84■■□□□ 1.09
CHRDL2-204ENST00000525413 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
CHRDL2-204ENST00000525413 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
CHRDL2-204ENST00000525413 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
CHRDL2-204ENST00000525413 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
CHRDL2-204ENST00000525413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
CHRDL2-204ENST00000525413 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
CHRDL2-204ENST00000525413 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
CHRDL2-204ENST00000525413 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
CHRDL2-204ENST00000525413 CDK13Q14004 1512 aaKnown RBP21.76■■□□□ 1.07
CHRDL2-204ENST00000525413 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
CHRDL2-204ENST00000525413 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
CHRDL2-204ENST00000525413 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
CHRDL2-204ENST00000525413 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
CHRDL2-204ENST00000525413 PLEKHD1A6NEE1 506 aa21.72■■□□□ 1.07
CHRDL2-204ENST00000525413 MAP3K1Q13233 1512 aa21.7■■□□□ 1.07
CHRDL2-204ENST00000525413 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
CHRDL2-204ENST00000525413 APLP2Q06481 763 aa21.69■■□□□ 1.06
CHRDL2-204ENST00000525413 CFAP43Q8NDM7 1665 aa21.69■■□□□ 1.06
CHRDL2-204ENST00000525413 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
CHRDL2-204ENST00000525413 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
CHRDL2-204ENST00000525413 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
CHRDL2-204ENST00000525413 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
CHRDL2-204ENST00000525413 GLI2P10070 1586 aa21.61■■□□□ 1.05
CHRDL2-204ENST00000525413 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
CHRDL2-204ENST00000525413 KCNH8Q96L42 1107 aa21.6■■□□□ 1.05
CHRDL2-204ENST00000525413 MAGI3Q5TCQ9 1506 aa21.59■■□□□ 1.05
CHRDL2-204ENST00000525413 KIF14Q15058 1648 aa21.58■■□□□ 1.05
CHRDL2-204ENST00000525413 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
CHRDL2-204ENST00000525413 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
CHRDL2-204ENST00000525413 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
CHRDL2-204ENST00000525413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHRDL2-204ENST00000525413 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
CHRDL2-204ENST00000525413 SUPT6HQ7KZ85 1726 aaKnown RBP21.5■■□□□ 1.03
CHRDL2-204ENST00000525413 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
CHRDL2-204ENST00000525413 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
CHRDL2-204ENST00000525413 CD109Q6YHK3 1445 aa21.48■■□□□ 1.03
CHRDL2-204ENST00000525413 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
CHRDL2-204ENST00000525413 TTC37Q6PGP7 1564 aa21.47■■□□□ 1.03
CHRDL2-204ENST00000525413 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
CHRDL2-204ENST00000525413 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
CHRDL2-204ENST00000525413 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
CHRDL2-204ENST00000525413 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
CHRDL2-204ENST00000525413 PLCH2O75038 1416 aa21.41■■□□□ 1.02
CHRDL2-204ENST00000525413 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
CHRDL2-204ENST00000525413 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
CHRDL2-204ENST00000525413 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
CHRDL2-204ENST00000525413 CDC42BPAQ5VT25 1732 aa21.38■■□□□ 1.01
CHRDL2-204ENST00000525413 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
CHRDL2-204ENST00000525413 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
CHRDL2-204ENST00000525413 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms