RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 CUX2O14529 1486 aa18.57■□□□□ 0.56
TRIM3-203ENST00000525074 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
TRIM3-203ENST00000525074 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
TRIM3-203ENST00000525074 WDR97A6NE52 1622 aa18.54■□□□□ 0.56
TRIM3-203ENST00000525074 ANP32CO43423 234 aa18.53■□□□□ 0.56
TRIM3-203ENST00000525074 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
TRIM3-203ENST00000525074 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
TRIM3-203ENST00000525074 IGF1RP08069 1367 aa18.5■□□□□ 0.55
TRIM3-203ENST00000525074 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
TRIM3-203ENST00000525074 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
TRIM3-203ENST00000525074 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
TRIM3-203ENST00000525074 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
TRIM3-203ENST00000525074 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
TRIM3-203ENST00000525074 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
TRIM3-203ENST00000525074 CFTRP13569 1480 aa18.44■□□□□ 0.54
TRIM3-203ENST00000525074 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRIM3-203ENST00000525074 PHLDB1Q86UU1 1377 aa18.44■□□□□ 0.54
TRIM3-203ENST00000525074 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
TRIM3-203ENST00000525074 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
TRIM3-203ENST00000525074 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-203ENST00000525074 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
TRIM3-203ENST00000525074 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
TRIM3-203ENST00000525074 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
TRIM3-203ENST00000525074 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
TRIM3-203ENST00000525074 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
TRIM3-203ENST00000525074 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
TRIM3-203ENST00000525074 NESP48681 1621 aa18.3■□□□□ 0.52
TRIM3-203ENST00000525074 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
TRIM3-203ENST00000525074 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
TRIM3-203ENST00000525074 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.51
TRIM3-203ENST00000525074 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
TRIM3-203ENST00000525074 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
TRIM3-203ENST00000525074 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
TRIM3-203ENST00000525074 TIAM1Q13009 1591 aa18.24■□□□□ 0.51
TRIM3-203ENST00000525074 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
TRIM3-203ENST00000525074 NBR1Q14596 966 aa18.24■□□□□ 0.51
TRIM3-203ENST00000525074 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
TRIM3-203ENST00000525074 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
TRIM3-203ENST00000525074 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
TRIM3-203ENST00000525074 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
TRIM3-203ENST00000525074 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
TRIM3-203ENST00000525074 DEKP35659 375 aaKnown RBP18.2■□□□□ 0.5
TRIM3-203ENST00000525074 PCF11O94913 1555 aaKnown RBP18.18■□□□□ 0.5
TRIM3-203ENST00000525074 FOXD1Q16676 465 aa18.16■□□□□ 0.5
TRIM3-203ENST00000525074 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
TRIM3-203ENST00000525074 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
TRIM3-203ENST00000525074 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
TRIM3-203ENST00000525074 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
TRIM3-203ENST00000525074 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
TRIM3-203ENST00000525074 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
TRIM3-203ENST00000525074 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-203ENST00000525074 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
TRIM3-203ENST00000525074 POLA1P09884 1462 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-203ENST00000525074 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
TRIM3-203ENST00000525074 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
TRIM3-203ENST00000525074 CCDC18Q5T9S5 1454 aa18.04■□□□□ 0.48
TRIM3-203ENST00000525074 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
TRIM3-203ENST00000525074 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
TRIM3-203ENST00000525074 C11orf95C9JLR9 678 aaPredicted RBP18.02■□□□□ 0.48
TRIM3-203ENST00000525074 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.476e-6■■■■□ 25.1
TRIM3-203ENST00000525074 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
TRIM3-203ENST00000525074 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
TRIM3-203ENST00000525074 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
TRIM3-203ENST00000525074 EIF4G2P78344 907 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRIM3-203ENST00000525074 CASKIN1Q8WXD9 1431 aa17.97■□□□□ 0.47
TRIM3-203ENST00000525074 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
TRIM3-203ENST00000525074 UACAQ9BZF9 1416 aa17.94■□□□□ 0.46
TRIM3-203ENST00000525074 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
TRIM3-203ENST00000525074 FYCO1Q9BQS8 1478 aa17.93■□□□□ 0.46
TRIM3-203ENST00000525074 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
TRIM3-203ENST00000525074 ANO8Q9HCE9 1232 aaPredicted RBP17.92■□□□□ 0.46
TRIM3-203ENST00000525074 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
TRIM3-203ENST00000525074 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
TRIM3-203ENST00000525074 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
TRIM3-203ENST00000525074 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
TRIM3-203ENST00000525074 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
TRIM3-203ENST00000525074 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
TRIM3-203ENST00000525074 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
TRIM3-203ENST00000525074 CCDC136Q96JN2 1154 aa17.91■□□□□ 0.46
TRIM3-203ENST00000525074 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
TRIM3-203ENST00000525074 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
TRIM3-203ENST00000525074 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
TRIM3-203ENST00000525074 FMN1Q68DA7 1419 aa17.9■□□□□ 0.46
TRIM3-203ENST00000525074 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
TRIM3-203ENST00000525074 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
TRIM3-203ENST00000525074 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.45
TRIM3-203ENST00000525074 NAIPQ13075 1403 aa17.89■□□□□ 0.45
TRIM3-203ENST00000525074 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
TRIM3-203ENST00000525074 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
TRIM3-203ENST00000525074 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
TRIM3-203ENST00000525074 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
TRIM3-203ENST00000525074 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
TRIM3-203ENST00000525074 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-203ENST00000525074 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
TRIM3-203ENST00000525074 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
TRIM3-203ENST00000525074 ZNF777Q9ULD5 760 aaPredicted RBP17.85■□□□□ 0.45
TRIM3-203ENST00000525074 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
TRIM3-203ENST00000525074 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
TRIM3-203ENST00000525074 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
TRIM3-203ENST00000525074 IL27Q8NEV9 243 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms