RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
CASP4-204ENST00000524843 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
CASP4-204ENST00000524843 WDR62O43379 1518 aa11.55□□□□□ -0.56
CASP4-204ENST00000524843 PBRM1Q86U86 1689 aa11.52□□□□□ -0.57
CASP4-204ENST00000524843 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
CASP4-204ENST00000524843 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
CASP4-204ENST00000524843 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
CASP4-204ENST00000524843 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
CASP4-204ENST00000524843 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
CASP4-204ENST00000524843 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
CASP4-204ENST00000524843 NPM3O75607 178 aaKnown RBP11.48□□□□□ -0.57
CASP4-204ENST00000524843 APLP2Q06481 763 aa11.48□□□□□ -0.57
CASP4-204ENST00000524843 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
CASP4-204ENST00000524843 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
CASP4-204ENST00000524843 ADAMTS12P58397 1594 aa11.46□□□□□ -0.57
CASP4-204ENST00000524843 THOC2Q8NI27 1593 aaKnown RBP11.46□□□□□ -0.57
CASP4-204ENST00000524843 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
CASP4-204ENST00000524843 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
CASP4-204ENST00000524843 SAMD9Q5K651 1589 aa11.43□□□□□ -0.58
CASP4-204ENST00000524843 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
CASP4-204ENST00000524843 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
CASP4-204ENST00000524843 DNAJC5BQ9UF47 199 aa11.42□□□□□ -0.58
CASP4-204ENST00000524843 FYCO1Q9BQS8 1478 aa11.42□□□□□ -0.58
CASP4-204ENST00000524843 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
CASP4-204ENST00000524843 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
CASP4-204ENST00000524843 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
CASP4-204ENST00000524843 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
CASP4-204ENST00000524843 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
CASP4-204ENST00000524843 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
CASP4-204ENST00000524843 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
CASP4-204ENST00000524843 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
CASP4-204ENST00000524843 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
CASP4-204ENST00000524843 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
CASP4-204ENST00000524843 PPARGC1BQ86YN6 1023 aaKnown RBP11.34□□□□□ -0.59
CASP4-204ENST00000524843 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
CASP4-204ENST00000524843 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
CASP4-204ENST00000524843 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
CASP4-204ENST00000524843 UGGT2Q9NYU1 1516 aa11.31□□□□□ -0.6
CASP4-204ENST00000524843 FHOD3Q2V2M9 1422 aa11.31□□□□□ -0.6
CASP4-204ENST00000524843 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
CASP4-204ENST00000524843 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
CASP4-204ENST00000524843 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
CASP4-204ENST00000524843 CCDC18Q5T9S5 1454 aa11.29□□□□□ -0.6
CASP4-204ENST00000524843 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
CASP4-204ENST00000524843 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
CASP4-204ENST00000524843 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
CASP4-204ENST00000524843 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
CASP4-204ENST00000524843 SYNJ2O15056 1496 aa11.26□□□□□ -0.61
CASP4-204ENST00000524843 TTBK1Q5TCY1 1321 aaPredicted RBP11.26□□□□□ -0.61
CASP4-204ENST00000524843 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
CASP4-204ENST00000524843 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
CASP4-204ENST00000524843 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
CASP4-204ENST00000524843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
CASP4-204ENST00000524843 KANK4Q5T7N3 995 aaPredicted RBP11.22□□□□□ -0.61
CASP4-204ENST00000524843 SUPT6HQ7KZ85 1726 aaKnown RBP11.22□□□□□ -0.61
CASP4-204ENST00000524843 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
CASP4-204ENST00000524843 LRRIQ1Q96JM4 1722 aa11.21□□□□□ -0.62
CASP4-204ENST00000524843 NUP160Q12769 1436 aa11.2□□□□□ -0.62
CASP4-204ENST00000524843 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
CASP4-204ENST00000524843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
CASP4-204ENST00000524843 ARHGEF11O15085 1522 aa11.17□□□□□ -0.62
CASP4-204ENST00000524843 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
CASP4-204ENST00000524843 DISP1Q96F81 1524 aa11.16□□□□□ -0.62
CASP4-204ENST00000524843 RAPGEF6Q8TEU7 1601 aa11.16□□□□□ -0.62
CASP4-204ENST00000524843 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
CASP4-204ENST00000524843 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
CASP4-204ENST00000524843 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
CASP4-204ENST00000524843 CARMIL2Q6F5E8 1435 aa11.14□□□□□ -0.63
CASP4-204ENST00000524843 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
CASP4-204ENST00000524843 NCOA2Q15596 1464 aa11.13□□□□□ -0.63
CASP4-204ENST00000524843 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
CASP4-204ENST00000524843 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
CASP4-204ENST00000524843 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
CASP4-204ENST00000524843 CHMP7Q8WUX9 453 aaPredicted RBP11.09□□□□□ -0.63
CASP4-204ENST00000524843 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
CASP4-204ENST00000524843 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
CASP4-204ENST00000524843 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
CASP4-204ENST00000524843 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
CASP4-204ENST00000524843 CHD1O14646 1710 aa11.08□□□□□ -0.64
CASP4-204ENST00000524843 MAGI3Q5TCQ9 1506 aa11.08□□□□□ -0.64
CASP4-204ENST00000524843 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
CASP4-204ENST00000524843 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
CASP4-204ENST00000524843 SHROOM2Q13796 1616 aa11.07□□□□□ -0.64
CASP4-204ENST00000524843 AKNAQ7Z591 1439 aa11.07□□□□□ -0.64
CASP4-204ENST00000524843 SETD5Q9C0A6 1442 aa11.07□□□□□ -0.64
CASP4-204ENST00000524843 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
CASP4-204ENST00000524843 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
CASP4-204ENST00000524843 ABCA8O94911 1581 aa11.05□□□□□ -0.64
CASP4-204ENST00000524843 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
CASP4-204ENST00000524843 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
CASP4-204ENST00000524843 HFM1A2PYH4 1435 aa11.02□□□□□ -0.64
CASP4-204ENST00000524843 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.64
CASP4-204ENST00000524843 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
CASP4-204ENST00000524843 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
CASP4-204ENST00000524843 KIF14Q15058 1648 aa11□□□□□ -0.65
CASP4-204ENST00000524843 FAM50AQ14320 339 aaKnown RBP11□□□□□ -0.65
CASP4-204ENST00000524843 DNMT1P26358 1616 aaKnown RBP10.98□□□□□ -0.65
CASP4-204ENST00000524843 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
CASP4-204ENST00000524843 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
CASP4-204ENST00000524843 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms