RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
PABPC1-223ENST00000523636 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
PABPC1-223ENST00000523636 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
PABPC1-223ENST00000523636 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
PABPC1-223ENST00000523636 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
PABPC1-223ENST00000523636 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-223ENST00000523636 ZNF608Q9ULD9 1512 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-223ENST00000523636 CHD1O14646 1710 aa10.55□□□□□ -0.72
PABPC1-223ENST00000523636 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-223ENST00000523636 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
PABPC1-223ENST00000523636 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
PABPC1-223ENST00000523636 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
PABPC1-223ENST00000523636 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.72
PABPC1-223ENST00000523636 LMTK3Q96Q04 1460 aa10.49□□□□□ -0.73
PABPC1-223ENST00000523636 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
PABPC1-223ENST00000523636 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-223ENST00000523636 FANCD2Q9BXW9 1451 aa10.48□□□□□ -0.73
PABPC1-223ENST00000523636 SOCS7O14512 581 aa10.46□□□□□ -0.73
PABPC1-223ENST00000523636 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
PABPC1-223ENST00000523636 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
PABPC1-223ENST00000523636 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.74
PABPC1-223ENST00000523636 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
PABPC1-223ENST00000523636 HECW2Q9P2P5 1572 aa10.44□□□□□ -0.74
PABPC1-223ENST00000523636 STAG3Q9UJ98 1225 aa10.44□□□□□ -0.74
PABPC1-223ENST00000523636 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
PABPC1-223ENST00000523636 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
PABPC1-223ENST00000523636 CLASP1Q7Z460 1538 aa10.41□□□□□ -0.74
PABPC1-223ENST00000523636 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
PABPC1-223ENST00000523636 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
PABPC1-223ENST00000523636 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-223ENST00000523636 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
PABPC1-223ENST00000523636 CFTRP13569 1480 aa10.3□□□□□ -0.76
PABPC1-223ENST00000523636 AQRO60306 1485 aaKnown RBP eCLIP10.3□□□□□ -0.761e-6■■■■■ 32.8
PABPC1-223ENST00000523636 GAPVD1Q14C86 1478 aa10.3□□□□□ -0.76
PABPC1-223ENST00000523636 SPDYE1Q8NFV5 336 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-223ENST00000523636 SYNJ2O15056 1496 aa10.27□□□□□ -0.77
PABPC1-223ENST00000523636 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
PABPC1-223ENST00000523636 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-223ENST00000523636 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
PABPC1-223ENST00000523636 ADGRL1O94910 1474 aa10.24□□□□□ -0.77
PABPC1-223ENST00000523636 MIER1Q8N108 512 aa10.24□□□□□ -0.77
PABPC1-223ENST00000523636 POTEHQ6S545 545 aa10.23□□□□□ -0.77
PABPC1-223ENST00000523636 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
PABPC1-223ENST00000523636 KDM6BO15054 1643 aa10.22□□□□□ -0.77
PABPC1-223ENST00000523636 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
PABPC1-223ENST00000523636 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
PABPC1-223ENST00000523636 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
PABPC1-223ENST00000523636 SPOCK2Q92563 424 aa10.2□□□□□ -0.78
PABPC1-223ENST00000523636 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
PABPC1-223ENST00000523636 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-223ENST00000523636 SYNJ1O43426 1573 aa10.19□□□□□ -0.78
PABPC1-223ENST00000523636 CLEC11AQ9Y240 323 aa10.16□□□□□ -0.78
PABPC1-223ENST00000523636 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
PABPC1-223ENST00000523636 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.78
PABPC1-223ENST00000523636 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
PABPC1-223ENST00000523636 WIZO95785 1651 aa10.14□□□□□ -0.79
PABPC1-223ENST00000523636 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
PABPC1-223ENST00000523636 DIP2BQ9P265 1576 aa10.12□□□□□ -0.79
PABPC1-223ENST00000523636 PITPNM1O00562 1244 aa10.11□□□□□ -0.79
PABPC1-223ENST00000523636 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
PABPC1-223ENST00000523636 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
PABPC1-223ENST00000523636 PKD2Q13563 968 aa10.09□□□□□ -0.79
PABPC1-223ENST00000523636 SPATA31D1Q6ZQQ2 1576 aa10.09□□□□□ -0.79
PABPC1-223ENST00000523636 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
PABPC1-223ENST00000523636 DNMBPQ6XZF7 1577 aa10.05□□□□□ -0.8
PABPC1-223ENST00000523636 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
PABPC1-223ENST00000523636 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-223ENST00000523636 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
PABPC1-223ENST00000523636 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
PABPC1-223ENST00000523636 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-223ENST00000523636 CEP170Q5SW79 1584 aa10.03□□□□□ -0.8
PABPC1-223ENST00000523636 MAGI1Q96QZ7 1491 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-223ENST00000523636 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
PABPC1-223ENST00000523636 PPRC1Q5VV67 1664 aaKnown RBP10.01□□□□□ -0.81
PABPC1-223ENST00000523636 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
PABPC1-223ENST00000523636 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
PABPC1-223ENST00000523636 COL17A1Q9UMD9 1497 aaPredicted RBP9.99□□□□□ -0.81
PABPC1-223ENST00000523636 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
PABPC1-223ENST00000523636 SHROOM2Q13796 1616 aa9.98□□□□□ -0.81
PABPC1-223ENST00000523636 NUBP1P53384 320 aa9.98□□□□□ -0.81
PABPC1-223ENST00000523636 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
PABPC1-223ENST00000523636 GSE1Q14687 1217 aa9.97□□□□□ -0.81
PABPC1-223ENST00000523636 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
PABPC1-223ENST00000523636 CIZ1Q9ULV3 898 aaPredicted RBP9.95□□□□□ -0.82
PABPC1-223ENST00000523636 WDR97A6NE52 1622 aa9.95□□□□□ -0.82
PABPC1-223ENST00000523636 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
PABPC1-223ENST00000523636 PBRM1Q86U86 1689 aa9.92□□□□□ -0.82
PABPC1-223ENST00000523636 ADCY10Q96PN6 1610 aa9.92□□□□□ -0.82
PABPC1-223ENST00000523636 SOGA1O94964 1423 aa9.9□□□□□ -0.82
PABPC1-223ENST00000523636 CERKQ8TCT0 537 aa9.9□□□□□ -0.82
PABPC1-223ENST00000523636 FAM212AQ96EL1 285 aa9.9□□□□□ -0.82
PABPC1-223ENST00000523636 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
PABPC1-223ENST00000523636 NUP160Q12769 1436 aa9.88□□□□□ -0.83
PABPC1-223ENST00000523636 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
PABPC1-223ENST00000523636 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
PABPC1-223ENST00000523636 SRCAPQ6ZRS2 3230 aa9.87□□□□□ -0.83
PABPC1-223ENST00000523636 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
PABPC1-223ENST00000523636 RGL2O15211 777 aa9.86□□□□□ -0.83
PABPC1-223ENST00000523636 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
PABPC1-223ENST00000523636 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms