RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
CDK16-221ENST00000523543 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
CDK16-221ENST00000523543 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
CDK16-221ENST00000523543 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
CDK16-221ENST00000523543 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
CDK16-221ENST00000523543 CTTNBP2Q8WZ74 1663 aa18.19■□□□□ 0.5
CDK16-221ENST00000523543 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
CDK16-221ENST00000523543 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
CDK16-221ENST00000523543 JPH4Q96JJ6 628 aa18.14■□□□□ 0.49
CDK16-221ENST00000523543 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
CDK16-221ENST00000523543 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
CDK16-221ENST00000523543 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
CDK16-221ENST00000523543 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
CDK16-221ENST00000523543 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
CDK16-221ENST00000523543 EFCAB5A4FU69 1503 aa18.06■□□□□ 0.48
CDK16-221ENST00000523543 CLIP1P30622 1438 aa18.06■□□□□ 0.48
CDK16-221ENST00000523543 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
CDK16-221ENST00000523543 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
CDK16-221ENST00000523543 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
CDK16-221ENST00000523543 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
CDK16-221ENST00000523543 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
CDK16-221ENST00000523543 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
CDK16-221ENST00000523543 FHOD3Q2V2M9 1422 aa17.97■□□□□ 0.47
CDK16-221ENST00000523543 ARAP1Q96P48 1450 aa17.96■□□□□ 0.47
CDK16-221ENST00000523543 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
CDK16-221ENST00000523543 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
CDK16-221ENST00000523543 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
CDK16-221ENST00000523543 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
CDK16-221ENST00000523543 PTPRGP23470 1445 aa17.91■□□□□ 0.46
CDK16-221ENST00000523543 FMN1Q68DA7 1419 aa17.89■□□□□ 0.45
CDK16-221ENST00000523543 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
CDK16-221ENST00000523543 ABCA8O94911 1581 aa17.83■□□□□ 0.44
CDK16-221ENST00000523543 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
CDK16-221ENST00000523543 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
CDK16-221ENST00000523543 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
CDK16-221ENST00000523543 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
CDK16-221ENST00000523543 UHRF1BP1LA0JNW5 1464 aa17.8■□□□□ 0.44
CDK16-221ENST00000523543 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
CDK16-221ENST00000523543 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
CDK16-221ENST00000523543 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
CDK16-221ENST00000523543 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
CDK16-221ENST00000523543 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
CDK16-221ENST00000523543 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
CDK16-221ENST00000523543 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
CDK16-221ENST00000523543 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
CDK16-221ENST00000523543 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
CDK16-221ENST00000523543 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
CDK16-221ENST00000523543 ATP10BO94823 1461 aa17.68■□□□□ 0.42
CDK16-221ENST00000523543 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
CDK16-221ENST00000523543 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
CDK16-221ENST00000523543 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
CDK16-221ENST00000523543 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
CDK16-221ENST00000523543 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
CDK16-221ENST00000523543 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
CDK16-221ENST00000523543 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
CDK16-221ENST00000523543 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
CDK16-221ENST00000523543 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK16-221ENST00000523543 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.41
CDK16-221ENST00000523543 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
CDK16-221ENST00000523543 APLP2Q06481 763 aa17.56■□□□□ 0.4
CDK16-221ENST00000523543 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
CDK16-221ENST00000523543 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
CDK16-221ENST00000523543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
CDK16-221ENST00000523543 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
CDK16-221ENST00000523543 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
CDK16-221ENST00000523543 LRRC9Q6ZRR7 1453 aa17.54■□□□□ 0.4
CDK16-221ENST00000523543 WDR7Q9Y4E6 1490 aa17.54■□□□□ 0.4
CDK16-221ENST00000523543 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
CDK16-221ENST00000523543 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
CDK16-221ENST00000523543 MTUS2Q5JR59 1369 aa17.52■□□□□ 0.39
CDK16-221ENST00000523543 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.39
CDK16-221ENST00000523543 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
CDK16-221ENST00000523543 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
CDK16-221ENST00000523543 KIF14Q15058 1648 aa17.43■□□□□ 0.38
CDK16-221ENST00000523543 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
CDK16-221ENST00000523543 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
CDK16-221ENST00000523543 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
CDK16-221ENST00000523543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDK16-221ENST00000523543 GLI2P10070 1586 aa17.4■□□□□ 0.38
CDK16-221ENST00000523543 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
CDK16-221ENST00000523543 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
CDK16-221ENST00000523543 ABCA9Q8IUA7 1624 aa17.37■□□□□ 0.37
CDK16-221ENST00000523543 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
CDK16-221ENST00000523543 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
CDK16-221ENST00000523543 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
CDK16-221ENST00000523543 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
CDK16-221ENST00000523543 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.36
CDK16-221ENST00000523543 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
CDK16-221ENST00000523543 PLCH2O75038 1416 aa17.31■□□□□ 0.36
CDK16-221ENST00000523543 MYOM3Q5VTT5 1437 aa17.31■□□□□ 0.36
CDK16-221ENST00000523543 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
CDK16-221ENST00000523543 MAP3K4Q9Y6R4 1608 aa17.3■□□□□ 0.36
CDK16-221ENST00000523543 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
CDK16-221ENST00000523543 MIA2Q96PC5 1412 aa17.28■□□□□ 0.36
CDK16-221ENST00000523543 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
CDK16-221ENST00000523543 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.35
CDK16-221ENST00000523543 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.35
CDK16-221ENST00000523543 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
CDK16-221ENST00000523543 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
CDK16-221ENST00000523543 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms