RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
FAM49B-227ENST00000523514 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
FAM49B-227ENST00000523514 CHD1O14646 1710 aa13.29□□□□□ -0.28
FAM49B-227ENST00000523514 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
FAM49B-227ENST00000523514 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
FAM49B-227ENST00000523514 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
FAM49B-227ENST00000523514 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
FAM49B-227ENST00000523514 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
FAM49B-227ENST00000523514 FBLN2P98095 1184 aa13.2□□□□□ -0.3
FAM49B-227ENST00000523514 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
FAM49B-227ENST00000523514 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
FAM49B-227ENST00000523514 CUL7Q14999 1698 aa13.16□□□□□ -0.3
FAM49B-227ENST00000523514 GRIN2AQ12879 1464 aa13.16□□□□□ -0.3
FAM49B-227ENST00000523514 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
FAM49B-227ENST00000523514 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
FAM49B-227ENST00000523514 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
FAM49B-227ENST00000523514 IGF1RP08069 1367 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 NUP160Q12769 1436 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
FAM49B-227ENST00000523514 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
FAM49B-227ENST00000523514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
FAM49B-227ENST00000523514 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
FAM49B-227ENST00000523514 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
FAM49B-227ENST00000523514 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
FAM49B-227ENST00000523514 EEA1Q15075 1411 aa13□□□□□ -0.33
FAM49B-227ENST00000523514 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
FAM49B-227ENST00000523514 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
FAM49B-227ENST00000523514 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
FAM49B-227ENST00000523514 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
FAM49B-227ENST00000523514 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
FAM49B-227ENST00000523514 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
FAM49B-227ENST00000523514 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
FAM49B-227ENST00000523514 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
FAM49B-227ENST00000523514 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
FAM49B-227ENST00000523514 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
FAM49B-227ENST00000523514 CTTNBP2Q8WZ74 1663 aa12.91□□□□□ -0.34
FAM49B-227ENST00000523514 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
FAM49B-227ENST00000523514 CYB5RLQ6IPT4 315 aa12.9□□□□□ -0.34
FAM49B-227ENST00000523514 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
FAM49B-227ENST00000523514 CARMIL2Q6F5E8 1435 aa12.86□□□□□ -0.35
FAM49B-227ENST00000523514 KIF21BO75037 1637 aa12.85□□□□□ -0.35
FAM49B-227ENST00000523514 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
FAM49B-227ENST00000523514 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
FAM49B-227ENST00000523514 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
FAM49B-227ENST00000523514 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
FAM49B-227ENST00000523514 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
FAM49B-227ENST00000523514 DISP1Q96F81 1524 aa12.79□□□□□ -0.36
FAM49B-227ENST00000523514 TNIKQ9UKE5 1360 aa12.79□□□□□ -0.36
FAM49B-227ENST00000523514 PTPRGP23470 1445 aa12.76□□□□□ -0.37
FAM49B-227ENST00000523514 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
FAM49B-227ENST00000523514 SAMD9Q5K651 1589 aa12.73□□□□□ -0.37
FAM49B-227ENST00000523514 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
FAM49B-227ENST00000523514 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.38
FAM49B-227ENST00000523514 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
FAM49B-227ENST00000523514 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
FAM49B-227ENST00000523514 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
FAM49B-227ENST00000523514 ABCC2Q92887 1545 aa12.69□□□□□ -0.38
FAM49B-227ENST00000523514 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
FAM49B-227ENST00000523514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
FAM49B-227ENST00000523514 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
FAM49B-227ENST00000523514 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
FAM49B-227ENST00000523514 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
FAM49B-227ENST00000523514 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
FAM49B-227ENST00000523514 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
FAM49B-227ENST00000523514 ABCA8O94911 1581 aa12.64□□□□□ -0.39
FAM49B-227ENST00000523514 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
FAM49B-227ENST00000523514 PLB1Q6P1J6 1458 aa12.62□□□□□ -0.39
FAM49B-227ENST00000523514 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
FAM49B-227ENST00000523514 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
FAM49B-227ENST00000523514 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
FAM49B-227ENST00000523514 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
FAM49B-227ENST00000523514 FHOD3Q2V2M9 1422 aa12.6□□□□□ -0.39
FAM49B-227ENST00000523514 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
FAM49B-227ENST00000523514 RANGAP1P46060 587 aaPredicted RBP12.59□□□□□ -0.39
FAM49B-227ENST00000523514 P3H3Q8IVL6 736 aa12.59□□□□□ -0.39
FAM49B-227ENST00000523514 DIP2BQ9P265 1576 aa12.59□□□□□ -0.39
FAM49B-227ENST00000523514 ASXL2Q76L83 1435 aa12.57□□□□□ -0.4
FAM49B-227ENST00000523514 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
FAM49B-227ENST00000523514 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
FAM49B-227ENST00000523514 GLI2P10070 1586 aa12.54□□□□□ -0.4
FAM49B-227ENST00000523514 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
FAM49B-227ENST00000523514 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
FAM49B-227ENST00000523514 NUP153P49790 1475 aaKnown RBP12.52□□□□□ -0.41
FAM49B-227ENST00000523514 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
FAM49B-227ENST00000523514 CAPN15O75808 1086 aa12.51□□□□□ -0.41
FAM49B-227ENST00000523514 CLIP1P30622 1438 aa12.51□□□□□ -0.41
FAM49B-227ENST00000523514 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
FAM49B-227ENST00000523514 ATP10BO94823 1461 aa12.5□□□□□ -0.41
FAM49B-227ENST00000523514 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
FAM49B-227ENST00000523514 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
FAM49B-227ENST00000523514 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
FAM49B-227ENST00000523514 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
FAM49B-227ENST00000523514 PCF11O94913 1555 aaKnown RBP12.44□□□□□ -0.42
FAM49B-227ENST00000523514 ARID3CA6NKF2 412 aa12.44□□□□□ -0.42
FAM49B-227ENST00000523514 APLP2Q06481 763 aa12.44□□□□□ -0.42
FAM49B-227ENST00000523514 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
FAM49B-227ENST00000523514 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms