RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
CHMP7-210ENST00000523091 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
CHMP7-210ENST00000523091 FHOD3Q2V2M9 1422 aa21.98■■□□□ 1.11
CHMP7-210ENST00000523091 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
CHMP7-210ENST00000523091 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
CHMP7-210ENST00000523091 CUL7Q14999 1698 aa21.95■■□□□ 1.1
CHMP7-210ENST00000523091 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
CHMP7-210ENST00000523091 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
CHMP7-210ENST00000523091 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
CHMP7-210ENST00000523091 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
CHMP7-210ENST00000523091 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
CHMP7-210ENST00000523091 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
CHMP7-210ENST00000523091 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
CHMP7-210ENST00000523091 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
CHMP7-210ENST00000523091 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
CHMP7-210ENST00000523091 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
CHMP7-210ENST00000523091 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
CHMP7-210ENST00000523091 CFAP43Q8NDM7 1665 aa21.81■■□□□ 1.08
CHMP7-210ENST00000523091 FAM50AQ14320 339 aaKnown RBP21.8■■□□□ 1.08
CHMP7-210ENST00000523091 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
CHMP7-210ENST00000523091 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
CHMP7-210ENST00000523091 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
CHMP7-210ENST00000523091 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
CHMP7-210ENST00000523091 RAB3GAP2Q9H2M9 1393 aa21.76■■□□□ 1.07
CHMP7-210ENST00000523091 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.072e-6■■■■■ 32.4
CHMP7-210ENST00000523091 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
CHMP7-210ENST00000523091 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CHMP7-210ENST00000523091 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
CHMP7-210ENST00000523091 SAMD9Q5K651 1589 aa21.69■■□□□ 1.06
CHMP7-210ENST00000523091 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
CHMP7-210ENST00000523091 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
CHMP7-210ENST00000523091 MIER1Q8N108 512 aa21.67■■□□□ 1.06
CHMP7-210ENST00000523091 PBRM1Q86U86 1689 aa21.64■■□□□ 1.06
CHMP7-210ENST00000523091 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
CHMP7-210ENST00000523091 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
CHMP7-210ENST00000523091 MAPKBP1O60336 1514 aa21.6■■□□□ 1.05
CHMP7-210ENST00000523091 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
CHMP7-210ENST00000523091 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
CHMP7-210ENST00000523091 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
CHMP7-210ENST00000523091 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
CHMP7-210ENST00000523091 FGD6Q6ZV73 1430 aa21.57■■□□□ 1.04
CHMP7-210ENST00000523091 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
CHMP7-210ENST00000523091 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
CHMP7-210ENST00000523091 SIN3AQ96ST3 1273 aa21.53■■□□□ 1.04
CHMP7-210ENST00000523091 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
CHMP7-210ENST00000523091 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
CHMP7-210ENST00000523091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHMP7-210ENST00000523091 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
CHMP7-210ENST00000523091 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
CHMP7-210ENST00000523091 WDR62O43379 1518 aa21.49■■□□□ 1.03
CHMP7-210ENST00000523091 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
CHMP7-210ENST00000523091 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
CHMP7-210ENST00000523091 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
CHMP7-210ENST00000523091 MYOM3Q5VTT5 1437 aa21.45■■□□□ 1.02
CHMP7-210ENST00000523091 SUPT6HQ7KZ85 1726 aaKnown RBP21.43■■□□□ 1.02
CHMP7-210ENST00000523091 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
CHMP7-210ENST00000523091 EHBP1L1Q8N3D4 1523 aa21.43■■□□□ 1.02
CHMP7-210ENST00000523091 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
CHMP7-210ENST00000523091 CCDC18Q5T9S5 1454 aa21.4■■□□□ 1.02
CHMP7-210ENST00000523091 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
CHMP7-210ENST00000523091 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
CHMP7-210ENST00000523091 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
CHMP7-210ENST00000523091 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
CHMP7-210ENST00000523091 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
CHMP7-210ENST00000523091 PTPN23Q9H3S7 1636 aa21.35■■□□□ 1.01
CHMP7-210ENST00000523091 HFM1A2PYH4 1435 aa21.35■■□□□ 1.01
CHMP7-210ENST00000523091 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
CHMP7-210ENST00000523091 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
CHMP7-210ENST00000523091 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
CHMP7-210ENST00000523091 DISP1Q96F81 1524 aa21.33■■□□□ 1
CHMP7-210ENST00000523091 NAIPQ13075 1403 aa21.33■■□□□ 1
CHMP7-210ENST00000523091 FBLN2P98095 1184 aa21.32■■□□□ 1
CHMP7-210ENST00000523091 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
CHMP7-210ENST00000523091 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
CHMP7-210ENST00000523091 KIAA0556O60303 1618 aa21.29■■□□□ 1
CHMP7-210ENST00000523091 UACAQ9BZF9 1416 aa21.27■■□□□ 1
CHMP7-210ENST00000523091 PPP1R15AO75807 674 aaPredicted RBP21.25■□□□□ 0.99
CHMP7-210ENST00000523091 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
CHMP7-210ENST00000523091 TCOF1Q13428 1488 aaKnown RBP21.24■□□□□ 0.99
CHMP7-210ENST00000523091 TIMELESSQ9UNS1 1208 aa21.23■□□□□ 0.99
CHMP7-210ENST00000523091 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
CHMP7-210ENST00000523091 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
CHMP7-210ENST00000523091 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
CHMP7-210ENST00000523091 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
CHMP7-210ENST00000523091 TONSLQ96HA7 1378 aa21.18■□□□□ 0.98
CHMP7-210ENST00000523091 RAPGEF6Q8TEU7 1601 aa21.18■□□□□ 0.98
CHMP7-210ENST00000523091 MIA2Q96PC5 1412 aa21.18■□□□□ 0.98
CHMP7-210ENST00000523091 ZNF644Q9H582 1327 aaPredicted RBP21.18■□□□□ 0.98
CHMP7-210ENST00000523091 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
CHMP7-210ENST00000523091 KDM6BO15054 1643 aa21.17■□□□□ 0.98
CHMP7-210ENST00000523091 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
CHMP7-210ENST00000523091 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
CHMP7-210ENST00000523091 JPH4Q96JJ6 628 aa21.14■□□□□ 0.98
CHMP7-210ENST00000523091 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
CHMP7-210ENST00000523091 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
CHMP7-210ENST00000523091 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
CHMP7-210ENST00000523091 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
CHMP7-210ENST00000523091 DENND4BO75064 1496 aaPredicted RBP21.1■□□□□ 0.97
CHMP7-210ENST00000523091 NUP160Q12769 1436 aa21.08■□□□□ 0.97
CHMP7-210ENST00000523091 FOXD1Q16676 465 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms