RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
ARFGEF1-208ENST00000522878 IFT140Q96RY7 1462 aa11.21□□□□□ -0.61
ARFGEF1-208ENST00000522878 TSPOAP1O95153 1857 aa11.16□□□□□ -0.62
ARFGEF1-208ENST00000522878 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
ARFGEF1-208ENST00000522878 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
ARFGEF1-208ENST00000522878 DIP2BQ9P265 1576 aa11.09□□□□□ -0.63
ARFGEF1-208ENST00000522878 FBLN2P98095 1184 aa11.07□□□□□ -0.64
ARFGEF1-208ENST00000522878 ABCC10Q5T3U5 1492 aa11.06□□□□□ -0.64
ARFGEF1-208ENST00000522878 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
ARFGEF1-208ENST00000522878 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
ARFGEF1-208ENST00000522878 ABCB7O75027 752 aa11.05□□□□□ -0.64
ARFGEF1-208ENST00000522878 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
ARFGEF1-208ENST00000522878 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
ARFGEF1-208ENST00000522878 CFTRP13569 1480 aa11.01□□□□□ -0.65
ARFGEF1-208ENST00000522878 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
ARFGEF1-208ENST00000522878 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
ARFGEF1-208ENST00000522878 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
ARFGEF1-208ENST00000522878 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
ARFGEF1-208ENST00000522878 PPRC1Q5VV67 1664 aaKnown RBP10.95□□□□□ -0.66
ARFGEF1-208ENST00000522878 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
ARFGEF1-208ENST00000522878 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
ARFGEF1-208ENST00000522878 APLP2Q06481 763 aa10.95□□□□□ -0.66
ARFGEF1-208ENST00000522878 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
ARFGEF1-208ENST00000522878 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
ARFGEF1-208ENST00000522878 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
ARFGEF1-208ENST00000522878 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
ARFGEF1-208ENST00000522878 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
ARFGEF1-208ENST00000522878 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
ARFGEF1-208ENST00000522878 CEP170Q5SW79 1584 aa10.86□□□□□ -0.67
ARFGEF1-208ENST00000522878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
ARFGEF1-208ENST00000522878 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
ARFGEF1-208ENST00000522878 MAGI1Q96QZ7 1491 aaPredicted RBP10.85□□□□□ -0.67
ARFGEF1-208ENST00000522878 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
ARFGEF1-208ENST00000522878 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
ARFGEF1-208ENST00000522878 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
ARFGEF1-208ENST00000522878 DNMBPQ6XZF7 1577 aa10.81□□□□□ -0.68
ARFGEF1-208ENST00000522878 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
ARFGEF1-208ENST00000522878 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
ARFGEF1-208ENST00000522878 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
ARFGEF1-208ENST00000522878 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
ARFGEF1-208ENST00000522878 POLA1P09884 1462 aaPredicted RBP10.75□□□□□ -0.69
ARFGEF1-208ENST00000522878 ABCC8Q09428 1581 aa10.75□□□□□ -0.69
ARFGEF1-208ENST00000522878 ADAMTSL3P82987 1691 aa10.75□□□□□ -0.69
ARFGEF1-208ENST00000522878 MED1Q15648 1581 aaPredicted RBP10.74□□□□□ -0.69
ARFGEF1-208ENST00000522878 KIF21BO75037 1637 aa10.74□□□□□ -0.69
ARFGEF1-208ENST00000522878 CHRDL2Q6WN34 429 aa10.74□□□□□ -0.69
ARFGEF1-208ENST00000522878 PTPRMP28827 1452 aa10.74□□□□□ -0.69
ARFGEF1-208ENST00000522878 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
ARFGEF1-208ENST00000522878 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
ARFGEF1-208ENST00000522878 WIZO95785 1651 aa10.73□□□□□ -0.69
ARFGEF1-208ENST00000522878 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
ARFGEF1-208ENST00000522878 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
ARFGEF1-208ENST00000522878 GLI2P10070 1586 aa10.65□□□□□ -0.7
ARFGEF1-208ENST00000522878 NUP160Q12769 1436 aa10.62□□□□□ -0.71
ARFGEF1-208ENST00000522878 HSPA2P54652 639 aa10.62□□□□□ -0.71
ARFGEF1-208ENST00000522878 POLA2Q14181 598 aa10.62□□□□□ -0.71
ARFGEF1-208ENST00000522878 STRCQ7RTU9 1775 aa10.62□□□□□ -0.71
ARFGEF1-208ENST00000522878 MAP3K4Q9Y6R4 1608 aa10.62□□□□□ -0.71
ARFGEF1-208ENST00000522878 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
ARFGEF1-208ENST00000522878 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
ARFGEF1-208ENST00000522878 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
ARFGEF1-208ENST00000522878 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
ARFGEF1-208ENST00000522878 RTN4Q9NQC3 1192 aaKnown RBP10.57□□□□□ -0.72
ARFGEF1-208ENST00000522878 BCORL1Q5H9F3 1711 aa10.57□□□□□ -0.72
ARFGEF1-208ENST00000522878 SOGA1O94964 1423 aa10.57□□□□□ -0.72
ARFGEF1-208ENST00000522878 IQSEC2Q5JU85 1478 aa10.56□□□□□ -0.72
ARFGEF1-208ENST00000522878 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
ARFGEF1-208ENST00000522878 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
ARFGEF1-208ENST00000522878 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
ARFGEF1-208ENST00000522878 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
ARFGEF1-208ENST00000522878 RIMS1Q86UR5 1692 aaKnown RBP10.53□□□□□ -0.72
ARFGEF1-208ENST00000522878 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
ARFGEF1-208ENST00000522878 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
ARFGEF1-208ENST00000522878 ZBTB22O15209 634 aa10.49□□□□□ -0.73
ARFGEF1-208ENST00000522878 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
ARFGEF1-208ENST00000522878 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
ARFGEF1-208ENST00000522878 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
ARFGEF1-208ENST00000522878 AKT1S1Q96B36 256 aa10.46□□□□□ -0.73
ARFGEF1-208ENST00000522878 CUL7Q14999 1698 aa10.46□□□□□ -0.74
ARFGEF1-208ENST00000522878 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
ARFGEF1-208ENST00000522878 TOP2AP11388 1531 aaKnown RBP10.44□□□□□ -0.74
ARFGEF1-208ENST00000522878 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
ARFGEF1-208ENST00000522878 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
ARFGEF1-208ENST00000522878 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
ARFGEF1-208ENST00000522878 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
ARFGEF1-208ENST00000522878 YEATS2Q9ULM3 1422 aa10.41□□□□□ -0.74
ARFGEF1-208ENST00000522878 EPRSP07814 1512 aaKnown RBP10.4□□□□□ -0.74
ARFGEF1-208ENST00000522878 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
ARFGEF1-208ENST00000522878 PIP4P2Q8N4L2 257 aa10.4□□□□□ -0.74
ARFGEF1-208ENST00000522878 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
ARFGEF1-208ENST00000522878 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
ARFGEF1-208ENST00000522878 PTPRTO14522 1441 aa10.37□□□□□ -0.75
ARFGEF1-208ENST00000522878 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
ARFGEF1-208ENST00000522878 ABCC2Q92887 1545 aa10.37□□□□□ -0.75
ARFGEF1-208ENST00000522878 ATF5Q9Y2D1 282 aaPredicted RBP10.36□□□□□ -0.75
ARFGEF1-208ENST00000522878 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
ARFGEF1-208ENST00000522878 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
ARFGEF1-208ENST00000522878 HSPA1LP34931 641 aa10.33□□□□□ -0.76
ARFGEF1-208ENST00000522878 SETD1BQ9UPS6 1966 aaKnown RBP10.33□□□□□ -0.76
ARFGEF1-208ENST00000522878 HAX1O00165 279 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms