RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 MIER1Q8N108 512 aa24.05■■□□□ 1.44
SMG1P3-206ENST00000522841 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
SMG1P3-206ENST00000522841 TIAM1Q13009 1591 aa24.01■■□□□ 1.43
SMG1P3-206ENST00000522841 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
SMG1P3-206ENST00000522841 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
SMG1P3-206ENST00000522841 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
SMG1P3-206ENST00000522841 FHOD3Q2V2M9 1422 aa23.95■■□□□ 1.43
SMG1P3-206ENST00000522841 PCF11O94913 1555 aaKnown RBP23.93■■□□□ 1.42
SMG1P3-206ENST00000522841 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
SMG1P3-206ENST00000522841 LRRC9Q6ZRR7 1453 aa23.92■■□□□ 1.42
SMG1P3-206ENST00000522841 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
SMG1P3-206ENST00000522841 PHLDB1Q86UU1 1377 aa23.89■■□□□ 1.42
SMG1P3-206ENST00000522841 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
SMG1P3-206ENST00000522841 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
SMG1P3-206ENST00000522841 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
SMG1P3-206ENST00000522841 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
SMG1P3-206ENST00000522841 CUL7Q14999 1698 aa23.85■■□□□ 1.41
SMG1P3-206ENST00000522841 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
SMG1P3-206ENST00000522841 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.4
SMG1P3-206ENST00000522841 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
SMG1P3-206ENST00000522841 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
SMG1P3-206ENST00000522841 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
SMG1P3-206ENST00000522841 EFCAB5A4FU69 1503 aa23.76■■□□□ 1.39
SMG1P3-206ENST00000522841 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
SMG1P3-206ENST00000522841 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
SMG1P3-206ENST00000522841 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
SMG1P3-206ENST00000522841 SETD5Q9C0A6 1442 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 CASKIN1Q8WXD9 1431 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
SMG1P3-206ENST00000522841 SIN3AQ96ST3 1273 aa23.66■■□□□ 1.38
SMG1P3-206ENST00000522841 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
SMG1P3-206ENST00000522841 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.38
SMG1P3-206ENST00000522841 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
SMG1P3-206ENST00000522841 MTUS2Q5JR59 1369 aa23.6■■□□□ 1.37
SMG1P3-206ENST00000522841 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
SMG1P3-206ENST00000522841 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
SMG1P3-206ENST00000522841 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
SMG1P3-206ENST00000522841 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
SMG1P3-206ENST00000522841 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
SMG1P3-206ENST00000522841 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
SMG1P3-206ENST00000522841 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
SMG1P3-206ENST00000522841 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
SMG1P3-206ENST00000522841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.46■■□□□ 1.359e-7■■□□□ 12
SMG1P3-206ENST00000522841 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
SMG1P3-206ENST00000522841 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
SMG1P3-206ENST00000522841 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 MAGI3Q5TCQ9 1506 aa23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.33
SMG1P3-206ENST00000522841 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
SMG1P3-206ENST00000522841 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
SMG1P3-206ENST00000522841 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SMG1P3-206ENST00000522841 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
SMG1P3-206ENST00000522841 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
SMG1P3-206ENST00000522841 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
SMG1P3-206ENST00000522841 PTPN23Q9H3S7 1636 aa23.34■■□□□ 1.33
SMG1P3-206ENST00000522841 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
SMG1P3-206ENST00000522841 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
SMG1P3-206ENST00000522841 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 TIMELESSQ9UNS1 1208 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 RRP7BPQ9NSQ0 103 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 NAIPQ13075 1403 aa23.3■■□□□ 1.32
SMG1P3-206ENST00000522841 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
SMG1P3-206ENST00000522841 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
SMG1P3-206ENST00000522841 UACAQ9BZF9 1416 aa23.26■■□□□ 1.31
SMG1P3-206ENST00000522841 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
SMG1P3-206ENST00000522841 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
SMG1P3-206ENST00000522841 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
SMG1P3-206ENST00000522841 WDR62O43379 1518 aa23.22■■□□□ 1.31
SMG1P3-206ENST00000522841 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
SMG1P3-206ENST00000522841 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
SMG1P3-206ENST00000522841 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
SMG1P3-206ENST00000522841 KDM6BO15054 1643 aa23.14■■□□□ 1.3
SMG1P3-206ENST00000522841 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
SMG1P3-206ENST00000522841 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
SMG1P3-206ENST00000522841 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
SMG1P3-206ENST00000522841 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 FBLN2P98095 1184 aa23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
SMG1P3-206ENST00000522841 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
SMG1P3-206ENST00000522841 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
SMG1P3-206ENST00000522841 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
SMG1P3-206ENST00000522841 FOXD1Q16676 465 aa23.07■■□□□ 1.28
SMG1P3-206ENST00000522841 NUP153P49790 1475 aaKnown RBP23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 DENND4BO75064 1496 aaPredicted RBP23.05■■□□□ 1.28
SMG1P3-206ENST00000522841 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 ANP32CO43423 234 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
SMG1P3-206ENST00000522841 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
SMG1P3-206ENST00000522841 DAPK1P53355 1430 aa22.98■■□□□ 1.27
SMG1P3-206ENST00000522841 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms