RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 CHD1O14646 1710 aa24.15■■□□□ 1.46
NDRG1-223ENST00000522665 CLIP1P30622 1438 aa24.14■■□□□ 1.45
NDRG1-223ENST00000522665 NUP160Q12769 1436 aa24.13■■□□□ 1.45
NDRG1-223ENST00000522665 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
NDRG1-223ENST00000522665 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
NDRG1-223ENST00000522665 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
NDRG1-223ENST00000522665 EFCAB5A4FU69 1503 aa24.05■■□□□ 1.44
NDRG1-223ENST00000522665 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
NDRG1-223ENST00000522665 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
NDRG1-223ENST00000522665 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
NDRG1-223ENST00000522665 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
NDRG1-223ENST00000522665 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
NDRG1-223ENST00000522665 CLASP1Q7Z460 1538 aa23.92■■□□□ 1.42
NDRG1-223ENST00000522665 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
NDRG1-223ENST00000522665 DNAJC5Q9H3Z4 198 aa23.88■■□□□ 1.41
NDRG1-223ENST00000522665 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
NDRG1-223ENST00000522665 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
NDRG1-223ENST00000522665 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
NDRG1-223ENST00000522665 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
NDRG1-223ENST00000522665 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
NDRG1-223ENST00000522665 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
NDRG1-223ENST00000522665 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
NDRG1-223ENST00000522665 FMN1Q68DA7 1419 aa23.8■■□□□ 1.4
NDRG1-223ENST00000522665 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
NDRG1-223ENST00000522665 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
NDRG1-223ENST00000522665 FYCO1Q9BQS8 1478 aa23.7■■□□□ 1.38
NDRG1-223ENST00000522665 PCF11O94913 1555 aaKnown RBP23.69■■□□□ 1.38
NDRG1-223ENST00000522665 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
NDRG1-223ENST00000522665 APLP2Q06481 763 aa23.62■■□□□ 1.37
NDRG1-223ENST00000522665 HECW1Q76N89 1606 aa23.62■■□□□ 1.37
NDRG1-223ENST00000522665 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
NDRG1-223ENST00000522665 PTPRGP23470 1445 aa23.59■■□□□ 1.37
NDRG1-223ENST00000522665 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
NDRG1-223ENST00000522665 MAP3K1Q13233 1512 aa23.58■■□□□ 1.36
NDRG1-223ENST00000522665 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
NDRG1-223ENST00000522665 CCDC18Q5T9S5 1454 aa23.54■■□□□ 1.36
NDRG1-223ENST00000522665 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
NDRG1-223ENST00000522665 ABCA8O94911 1581 aa23.53■■□□□ 1.36
NDRG1-223ENST00000522665 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
NDRG1-223ENST00000522665 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
NDRG1-223ENST00000522665 ATP1B4Q9UN42 357 aaPredicted RBP23.52■■□□□ 1.36
NDRG1-223ENST00000522665 NUP153P49790 1475 aaKnown RBP23.48■■□□□ 1.35
NDRG1-223ENST00000522665 UACAQ9BZF9 1416 aa23.47■■□□□ 1.35
NDRG1-223ENST00000522665 EPRSP07814 1512 aaKnown RBP23.47■■□□□ 1.35
NDRG1-223ENST00000522665 LRRIQ1Q96JM4 1722 aa23.45■■□□□ 1.34
NDRG1-223ENST00000522665 ARHGEF11O15085 1522 aa23.45■■□□□ 1.34
NDRG1-223ENST00000522665 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
NDRG1-223ENST00000522665 UHRF1BP1LA0JNW5 1464 aa23.42■■□□□ 1.34
NDRG1-223ENST00000522665 CDK13Q14004 1512 aaKnown RBP23.4■■□□□ 1.34
NDRG1-223ENST00000522665 LRRC9Q6ZRR7 1453 aa23.4■■□□□ 1.34
NDRG1-223ENST00000522665 EHBP1L1Q8N3D4 1523 aa23.36■■□□□ 1.33
NDRG1-223ENST00000522665 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
NDRG1-223ENST00000522665 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
NDRG1-223ENST00000522665 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
NDRG1-223ENST00000522665 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
NDRG1-223ENST00000522665 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
NDRG1-223ENST00000522665 KANK4Q5T7N3 995 aaPredicted RBP23.34■■□□□ 1.33
NDRG1-223ENST00000522665 CDK11AQ9UQ88 783 aaPredicted RBP23.32■■□□□ 1.32
NDRG1-223ENST00000522665 ATP10BO94823 1461 aa23.31■■□□□ 1.32
NDRG1-223ENST00000522665 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
NDRG1-223ENST00000522665 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
NDRG1-223ENST00000522665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
NDRG1-223ENST00000522665 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
NDRG1-223ENST00000522665 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
NDRG1-223ENST00000522665 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
NDRG1-223ENST00000522665 SUPT6HQ7KZ85 1726 aaKnown RBP23.26■■□□□ 1.31
NDRG1-223ENST00000522665 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
NDRG1-223ENST00000522665 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
NDRG1-223ENST00000522665 PLEKHD1A6NEE1 506 aa23.2■■□□□ 1.3
NDRG1-223ENST00000522665 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
NDRG1-223ENST00000522665 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
NDRG1-223ENST00000522665 KIF14Q15058 1648 aa23.17■■□□□ 1.3
NDRG1-223ENST00000522665 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
NDRG1-223ENST00000522665 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
NDRG1-223ENST00000522665 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
NDRG1-223ENST00000522665 WDR7Q9Y4E6 1490 aa23.1■■□□□ 1.29
NDRG1-223ENST00000522665 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
NDRG1-223ENST00000522665 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
NDRG1-223ENST00000522665 CCNB3Q8WWL7 1395 aa23.06■■□□□ 1.28
NDRG1-223ENST00000522665 ASXL2Q76L83 1435 aa23.06■■□□□ 1.28
NDRG1-223ENST00000522665 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
NDRG1-223ENST00000522665 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
NDRG1-223ENST00000522665 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
NDRG1-223ENST00000522665 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
NDRG1-223ENST00000522665 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
NDRG1-223ENST00000522665 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
NDRG1-223ENST00000522665 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
NDRG1-223ENST00000522665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.27
NDRG1-223ENST00000522665 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
NDRG1-223ENST00000522665 GPATCH8Q9UKJ3 1502 aaKnown RBP22.97■■□□□ 1.27
NDRG1-223ENST00000522665 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
NDRG1-223ENST00000522665 CDC42BPAQ5VT25 1732 aa22.95■■□□□ 1.26
NDRG1-223ENST00000522665 PREX2Q70Z35 1606 aa22.95■■□□□ 1.26
NDRG1-223ENST00000522665 TCOF1Q13428 1488 aaKnown RBP22.94■■□□□ 1.26
NDRG1-223ENST00000522665 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
NDRG1-223ENST00000522665 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
NDRG1-223ENST00000522665 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
NDRG1-223ENST00000522665 CFDP1Q9UEE9 299 aaPredicted RBP22.9■■□□□ 1.26
NDRG1-223ENST00000522665 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.25
NDRG1-223ENST00000522665 ARAP3Q8WWN8 1544 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms