RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 SYNJ1O43426 1573 aa12.36□□□□□ -0.43
SH2D4A-205ENST00000522328 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
SH2D4A-205ENST00000522328 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
SH2D4A-205ENST00000522328 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
SH2D4A-205ENST00000522328 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
SH2D4A-205ENST00000522328 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
SH2D4A-205ENST00000522328 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
SH2D4A-205ENST00000522328 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
SH2D4A-205ENST00000522328 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
SH2D4A-205ENST00000522328 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
SH2D4A-205ENST00000522328 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
SH2D4A-205ENST00000522328 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
SH2D4A-205ENST00000522328 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
SH2D4A-205ENST00000522328 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
SH2D4A-205ENST00000522328 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
SH2D4A-205ENST00000522328 FHAD1B1AJZ9 1412 aa12.19□□□□□ -0.46
SH2D4A-205ENST00000522328 NUP160Q12769 1436 aa12.19□□□□□ -0.46
SH2D4A-205ENST00000522328 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
SH2D4A-205ENST00000522328 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
SH2D4A-205ENST00000522328 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
SH2D4A-205ENST00000522328 SHROOM2Q13796 1616 aa12.12□□□□□ -0.47
SH2D4A-205ENST00000522328 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
SH2D4A-205ENST00000522328 PRG4Q92954 1404 aaPredicted RBP12.04□□□□□ -0.48
SH2D4A-205ENST00000522328 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
SH2D4A-205ENST00000522328 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
SH2D4A-205ENST00000522328 KIF27Q86VH2 1401 aa12□□□□□ -0.49
SH2D4A-205ENST00000522328 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
SH2D4A-205ENST00000522328 CUL7Q14999 1698 aa11.98□□□□□ -0.49
SH2D4A-205ENST00000522328 KIAA0586Q9BVV6 1533 aa11.98□□□□□ -0.49
SH2D4A-205ENST00000522328 IGF1RP08069 1367 aa11.97□□□□□ -0.49
SH2D4A-205ENST00000522328 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
SH2D4A-205ENST00000522328 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
SH2D4A-205ENST00000522328 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
SH2D4A-205ENST00000522328 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
SH2D4A-205ENST00000522328 ABCC10Q5T3U5 1492 aa11.94□□□□□ -0.5
SH2D4A-205ENST00000522328 ADCY10Q96PN6 1610 aa11.91□□□□□ -0.5
SH2D4A-205ENST00000522328 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
SH2D4A-205ENST00000522328 FAM69CQ0P6D2 419 aa11.89□□□□□ -0.51
SH2D4A-205ENST00000522328 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
SH2D4A-205ENST00000522328 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
SH2D4A-205ENST00000522328 PTPRGP23470 1445 aa11.86□□□□□ -0.51
SH2D4A-205ENST00000522328 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
SH2D4A-205ENST00000522328 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
SH2D4A-205ENST00000522328 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
SH2D4A-205ENST00000522328 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
SH2D4A-205ENST00000522328 KDM6BO15054 1643 aa11.8□□□□□ -0.52
SH2D4A-205ENST00000522328 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
SH2D4A-205ENST00000522328 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
SH2D4A-205ENST00000522328 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
SH2D4A-205ENST00000522328 UACAQ9BZF9 1416 aa11.77□□□□□ -0.52
SH2D4A-205ENST00000522328 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
SH2D4A-205ENST00000522328 UGGT2Q9NYU1 1516 aa11.77□□□□□ -0.52
SH2D4A-205ENST00000522328 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
SH2D4A-205ENST00000522328 GLI2P10070 1586 aa11.76□□□□□ -0.53
SH2D4A-205ENST00000522328 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
SH2D4A-205ENST00000522328 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
SH2D4A-205ENST00000522328 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
SH2D4A-205ENST00000522328 KIAA0556O60303 1618 aa11.73□□□□□ -0.53
SH2D4A-205ENST00000522328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
SH2D4A-205ENST00000522328 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
SH2D4A-205ENST00000522328 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
SH2D4A-205ENST00000522328 PPRC1Q5VV67 1664 aaKnown RBP11.69□□□□□ -0.54
SH2D4A-205ENST00000522328 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
SH2D4A-205ENST00000522328 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
SH2D4A-205ENST00000522328 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
SH2D4A-205ENST00000522328 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
SH2D4A-205ENST00000522328 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
SH2D4A-205ENST00000522328 PRXQ9BXM0 1461 aa11.66□□□□□ -0.54
SH2D4A-205ENST00000522328 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
SH2D4A-205ENST00000522328 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
SH2D4A-205ENST00000522328 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
SH2D4A-205ENST00000522328 ABCA8O94911 1581 aa11.62□□□□□ -0.55
SH2D4A-205ENST00000522328 FAM9AQ8IZU1 332 aaPredicted RBP11.62□□□□□ -0.55
SH2D4A-205ENST00000522328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-205ENST00000522328 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
SH2D4A-205ENST00000522328 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-205ENST00000522328 COL17A1Q9UMD9 1497 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-205ENST00000522328 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
SH2D4A-205ENST00000522328 FKBP8Q14318 412 aa11.6□□□□□ -0.55
SH2D4A-205ENST00000522328 CFAP43Q8NDM7 1665 aa11.59□□□□□ -0.55
SH2D4A-205ENST00000522328 ADGRL1O94910 1474 aa11.59□□□□□ -0.55
SH2D4A-205ENST00000522328 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
SH2D4A-205ENST00000522328 EEA1Q15075 1411 aa11.54□□□□□ -0.56
SH2D4A-205ENST00000522328 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
SH2D4A-205ENST00000522328 SAMD9Q5K651 1589 aa11.53□□□□□ -0.56
SH2D4A-205ENST00000522328 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
SH2D4A-205ENST00000522328 ATP10BO94823 1461 aa11.51□□□□□ -0.57
SH2D4A-205ENST00000522328 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
SH2D4A-205ENST00000522328 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
SH2D4A-205ENST00000522328 ABCA9Q8IUA7 1624 aa11.49□□□□□ -0.57
SH2D4A-205ENST00000522328 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
SH2D4A-205ENST00000522328 NEO1Q92859 1461 aa11.46□□□□□ -0.57
SH2D4A-205ENST00000522328 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
SH2D4A-205ENST00000522328 ARID3CA6NKF2 412 aa11.45□□□□□ -0.58
SH2D4A-205ENST00000522328 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
SH2D4A-205ENST00000522328 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
SH2D4A-205ENST00000522328 HECW2Q9P2P5 1572 aa11.44□□□□□ -0.58
SH2D4A-205ENST00000522328 EFCAB5A4FU69 1503 aa11.43□□□□□ -0.58
SH2D4A-205ENST00000522328 KIF21BO75037 1637 aa11.42□□□□□ -0.58
SH2D4A-205ENST00000522328 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms