RNA–Protein interactions for RNA: ENST00000521727.5

STAU2-215, Transcript of staufen double-stranded RNA binding protein 2, human

TSL 5 BASIC

Gene STAU2, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAU2-215	ENST00000521727	CUX1	P39880	1505 aa		14.09	□□□□□ -0.15
STAU2-215	ENST00000521727	CCNB3	Q8WWL7	1395 aa		14.09	□□□□□ -0.15
STAU2-215	ENST00000521727	TOP2B	Q02880	1626 aa		14.08	□□□□□ -0.16
STAU2-215	ENST00000521727	RRP7BP	Q9NSQ0	103 aa		14.07	□□□□□ -0.16
STAU2-215	ENST00000521727	FHOD3	Q2V2M9	1422 aa		14.07	□□□□□ -0.16
STAU2-215	ENST00000521727	TONSL	Q96HA7	1378 aa		14.03	□□□□□ -0.16
STAU2-215	ENST00000521727	KIF21B	O75037	1637 aa		14.03	□□□□□ -0.16
STAU2-215	ENST00000521727	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.98	□□□□□ -0.17
STAU2-215	ENST00000521727	NEFL	P07196	543 aa		13.98	□□□□□ -0.17
STAU2-215	ENST00000521727	PRX	Q9BXM0	1461 aa		13.97	□□□□□ -0.17
STAU2-215	ENST00000521727	GAPVD1	Q14C86	1478 aa		13.96	□□□□□ -0.17
STAU2-215	ENST00000521727	FMN1	Q68DA7	1419 aa		13.96	□□□□□ -0.18
STAU2-215	ENST00000521727	PLEKHD1	A6NEE1	506 aa		13.96	□□□□□ -0.18
STAU2-215	ENST00000521727	SIN3A	Q96ST3	1273 aa		13.96	□□□□□ -0.18
STAU2-215	ENST00000521727	TOPBP1	Q92547	1522 aa		13.94	□□□□□ -0.18
STAU2-215	ENST00000521727	ARAP1	Q96P48	1450 aa		13.94	□□□□□ -0.18
STAU2-215	ENST00000521727	DDX10	Q13206	875 aa	Known RBP	13.94	□□□□□ -0.18
STAU2-215	ENST00000521727	KCNH8	Q96L42	1107 aa		13.94	□□□□□ -0.18
STAU2-215	ENST00000521727	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.93	□□□□□ -0.18
STAU2-215	ENST00000521727	POLA1	P09884	1462 aa	Predicted RBP	13.93	□□□□□ -0.18
STAU2-215	ENST00000521727	ARHGAP35	Q9NRY4	1499 aa		13.93	□□□□□ -0.18
STAU2-215	ENST00000521727	ERICH3	Q5RHP9	1530 aa		13.93	□□□□□ -0.18
STAU2-215	ENST00000521727	GTF3C3	Q9Y5Q9	886 aa		13.93	□□□□□ -0.18
STAU2-215	ENST00000521727	ANP32C	O43423	234 aa		13.92	□□□□□ -0.18
STAU2-215	ENST00000521727	TSPY4	P0CV99	314 aa		13.92	□□□□□ -0.18
STAU2-215	ENST00000521727	TSPY10	P0CW01	314 aa		13.92	□□□□□ -0.18
STAU2-215	ENST00000521727	MIER1	Q8N108	512 aa		13.92	□□□□□ -0.18
STAU2-215	ENST00000521727	AQR	O60306	1485 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
STAU2-215	ENST00000521727	ACIN1	Q9UKV3	1341 aa	Known RBP	13.89	□□□□□ -0.19
STAU2-215	ENST00000521727	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	5e-6	■■■□□ 16.1
STAU2-215	ENST00000521727	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.88	□□□□□ -0.19
STAU2-215	ENST00000521727	RAB3GAP2	Q9H2M9	1393 aa		13.88	□□□□□ -0.19
STAU2-215	ENST00000521727	SETD5	Q9C0A6	1442 aa		13.86	□□□□□ -0.19
STAU2-215	ENST00000521727	DNMBP	Q6XZF7	1577 aa		13.85	□□□□□ -0.19
STAU2-215	ENST00000521727	CLSPN	Q9HAW4	1339 aa		13.85	□□□□□ -0.19
STAU2-215	ENST00000521727	NPM1	P06748	294 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
STAU2-215	ENST00000521727	BIVM-ERCC5	R4GMW8	1640 aa		13.83	□□□□□ -0.2
STAU2-215	ENST00000521727	JPH4	Q96JJ6	628 aa		13.82	□□□□□ -0.2
STAU2-215	ENST00000521727	CARMIL2	Q6F5E8	1435 aa		13.81	□□□□□ -0.2
STAU2-215	ENST00000521727	KDM2A	Q9Y2K7	1162 aa		13.79	□□□□□ -0.2
STAU2-215	ENST00000521727	LAMC3	Q9Y6N6	1575 aa		13.79	□□□□□ -0.2
STAU2-215	ENST00000521727	PHLDB1	Q86UU1	1377 aa		13.78	□□□□□ -0.2
STAU2-215	ENST00000521727	DHX57	Q6P158	1386 aa	Known RBP	13.77	□□□□□ -0.2
STAU2-215	ENST00000521727	MRC2	Q9UBG0	1479 aa		13.77	□□□□□ -0.2
STAU2-215	ENST00000521727	ABCA10	Q8WWZ4	1543 aa		13.77	□□□□□ -0.21
STAU2-215	ENST00000521727	URB2	Q14146	1524 aa	Known RBP	13.76	□□□□□ -0.21
STAU2-215	ENST00000521727	FOXD1	Q16676	465 aa		13.76	□□□□□ -0.21
STAU2-215	ENST00000521727	LRRC9	Q6ZRR7	1453 aa		13.75	□□□□□ -0.21
STAU2-215	ENST00000521727	GRIN2B	Q13224	1484 aa		13.74	□□□□□ -0.21
STAU2-215	ENST00000521727	BCAN	Q96GW7	911 aa		13.74	□□□□□ -0.21
STAU2-215	ENST00000521727	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
STAU2-215	ENST00000521727	CHGA	P10645	457 aa	Known RBP	13.71	□□□□□ -0.22
STAU2-215	ENST00000521727	CASKIN1	Q8WXD9	1431 aa		13.7	□□□□□ -0.22
STAU2-215	ENST00000521727	RGL3	Q3MIN7	710 aa		13.7	□□□□□ -0.22
STAU2-215	ENST00000521727	SCAF1	Q9H7N4	1312 aa	Known RBP	13.69	□□□□□ -0.22
STAU2-215	ENST00000521727	CCDC18	Q5T9S5	1454 aa		13.69	□□□□□ -0.22
STAU2-215	ENST00000521727	IFT140	Q96RY7	1462 aa		13.67	□□□□□ -0.22
STAU2-215	ENST00000521727	FGD6	Q6ZV73	1430 aa		13.66	□□□□□ -0.22
STAU2-215	ENST00000521727	FYCO1	Q9BQS8	1478 aa		13.66	□□□□□ -0.22
STAU2-215	ENST00000521727	RRBP1	Q9P2E9	1410 aa	Known RBP	13.65	□□□□□ -0.22
STAU2-215	ENST00000521727	MPHOSPH9	Q99550	1183 aa		13.65	□□□□□ -0.22
STAU2-215	ENST00000521727	TIAM1	Q13009	1591 aa		13.65	□□□□□ -0.23
STAU2-215	ENST00000521727	EFCAB5	A4FU69	1503 aa		13.64	□□□□□ -0.23
STAU2-215	ENST00000521727	SNAPC4	Q5SXM2	1469 aa		13.64	□□□□□ -0.23
STAU2-215	ENST00000521727	ZNF644	Q9H582	1327 aa	Predicted RBP	13.64	□□□□□ -0.23
STAU2-215	ENST00000521727	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
STAU2-215	ENST00000521727	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.63	□□□□□ -0.23	5e-6	■□□□□ 10.2
STAU2-215	ENST00000521727	FAM9B	Q8IZU0	186 aa		13.63	□□□□□ -0.23
STAU2-215	ENST00000521727	PRDM2	Q13029	1718 aa		13.63	□□□□□ -0.23
STAU2-215	ENST00000521727	MYOM3	Q5VTT5	1437 aa		13.62	□□□□□ -0.23
STAU2-215	ENST00000521727	NCOA2	Q15596	1464 aa		13.62	□□□□□ -0.23
STAU2-215	ENST00000521727	PTPRG	P23470	1445 aa		13.62	□□□□□ -0.23
STAU2-215	ENST00000521727	PKD2	Q13563	968 aa		13.61	□□□□□ -0.23
STAU2-215	ENST00000521727	TIMELESS	Q9UNS1	1208 aa		13.61	□□□□□ -0.23
STAU2-215	ENST00000521727	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.61	□□□□□ -0.23
STAU2-215	ENST00000521727	PCF11	O94913	1555 aa	Known RBP	13.6	□□□□□ -0.23
STAU2-215	ENST00000521727	PPP1R15A	O75807	674 aa	Predicted RBP	13.6	□□□□□ -0.23
STAU2-215	ENST00000521727	CUL7	Q14999	1698 aa		13.6	□□□□□ -0.23
STAU2-215	ENST00000521727	SENP3	Q9H4L4	574 aa	Predicted RBP	13.58	□□□□□ -0.24
STAU2-215	ENST00000521727	MRS2	Q9HD23	443 aa		13.56	□□□□□ -0.24
STAU2-215	ENST00000521727	NUP155	O75694	1391 aa		13.56	□□□□□ -0.24
STAU2-215	ENST00000521727	ANKRD30A	Q9BXX3	1397 aa		13.56	□□□□□ -0.24
STAU2-215	ENST00000521727	CARD11	Q9BXL7	1154 aa		13.56	□□□□□ -0.24
STAU2-215	ENST00000521727	DCAF11	Q8TEB1	546 aa		13.55	□□□□□ -0.24
STAU2-215	ENST00000521727	L3MBTL2	Q969R5	705 aa		13.55	□□□□□ -0.24
STAU2-215	ENST00000521727	HSPA5	P11021	654 aa	Known RBP	13.54	□□□□□ -0.24
STAU2-215	ENST00000521727	IQGAP2	Q13576	1575 aa		13.53	□□□□□ -0.24
STAU2-215	ENST00000521727	FKBP8	Q14318	412 aa		13.53	□□□□□ -0.24
STAU2-215	ENST00000521727	ERICH6	Q7L0X2	663 aa		13.53	□□□□□ -0.24
STAU2-215	ENST00000521727	CDK13	Q14004	1512 aa	Known RBP	13.52	□□□□□ -0.24
STAU2-215	ENST00000521727	EFCAB2	Q5VUJ9	269 aa		13.52	□□□□□ -0.24
STAU2-215	ENST00000521727	SENP3-EIF4A1	A0A087X0R7	540 aa		13.52	□□□□□ -0.25
STAU2-215	ENST00000521727	SALL2	Q9Y467	1007 aa	Predicted RBP	13.51	□□□□□ -0.25
STAU2-215	ENST00000521727	PLPPR3	Q6T4P5	718 aa		13.51	□□□□□ -0.25
STAU2-215	ENST00000521727	KIAA0586	Q9BVV6	1533 aa		13.51	□□□□□ -0.25
STAU2-215	ENST00000521727	STAG3	Q9UJ98	1225 aa		13.51	□□□□□ -0.25
STAU2-215	ENST00000521727	KIF21A	Q7Z4S6	1674 aa		13.5	□□□□□ -0.25
STAU2-215	ENST00000521727	TMC1	Q8TDI8	760 aa		13.5	□□□□□ -0.25
STAU2-215	ENST00000521727	PRG4	Q92954	1404 aa	Predicted RBP	13.5	□□□□□ -0.25
STAU2-215	ENST00000521727	ESF1	Q9H501	851 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms