RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 DDX10Q13206 875 aaKnown RBP25.19■■□□□ 1.62
TRAM1-205ENST00000521425 CCNB3Q8WWL7 1395 aa25.18■■□□□ 1.62
TRAM1-205ENST00000521425 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
TRAM1-205ENST00000521425 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.61
TRAM1-205ENST00000521425 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
TRAM1-205ENST00000521425 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
TRAM1-205ENST00000521425 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
TRAM1-205ENST00000521425 RRP7BPQ9NSQ0 103 aa25.13■■□□□ 1.61
TRAM1-205ENST00000521425 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
TRAM1-205ENST00000521425 BCANQ96GW7 911 aa25.09■■□□□ 1.61
TRAM1-205ENST00000521425 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
TRAM1-205ENST00000521425 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
TRAM1-205ENST00000521425 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
TRAM1-205ENST00000521425 MTUS2Q5JR59 1369 aa25■■□□□ 1.59
TRAM1-205ENST00000521425 HMGXB3Q12766 1538 aa25■■□□□ 1.59
TRAM1-205ENST00000521425 FOXD1Q16676 465 aa24.99■■□□□ 1.59
TRAM1-205ENST00000521425 ZNF777Q9ULD5 760 aaPredicted RBP24.98■■□□□ 1.59
TRAM1-205ENST00000521425 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.58
TRAM1-205ENST00000521425 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
TRAM1-205ENST00000521425 ZNF326Q5BKZ1 582 aaKnown RBP24.9■■□□□ 1.58
TRAM1-205ENST00000521425 PRKCSHP14314 528 aaPredicted RBP24.88■■□□□ 1.57
TRAM1-205ENST00000521425 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
TRAM1-205ENST00000521425 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
TRAM1-205ENST00000521425 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
TRAM1-205ENST00000521425 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
TRAM1-205ENST00000521425 SETD5Q9C0A6 1442 aa24.77■■□□□ 1.56
TRAM1-205ENST00000521425 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
TRAM1-205ENST00000521425 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
TRAM1-205ENST00000521425 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
TRAM1-205ENST00000521425 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
TRAM1-205ENST00000521425 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.54
TRAM1-205ENST00000521425 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
TRAM1-205ENST00000521425 ZNF644Q9H582 1327 aaPredicted RBP24.68■■□□□ 1.54
TRAM1-205ENST00000521425 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
TRAM1-205ENST00000521425 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
TRAM1-205ENST00000521425 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
TRAM1-205ENST00000521425 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
TRAM1-205ENST00000521425 ANP32CO43423 234 aa24.59■■□□□ 1.53
TRAM1-205ENST00000521425 PCF11O94913 1555 aaKnown RBP24.57■■□□□ 1.52
TRAM1-205ENST00000521425 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
TRAM1-205ENST00000521425 TIAM1Q13009 1591 aa24.57■■□□□ 1.52
TRAM1-205ENST00000521425 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
TRAM1-205ENST00000521425 FKBP8Q14318 412 aa24.55■■□□□ 1.52
TRAM1-205ENST00000521425 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
TRAM1-205ENST00000521425 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
TRAM1-205ENST00000521425 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
TRAM1-205ENST00000521425 KDM2AQ9Y2K7 1162 aa24.48■■□□□ 1.51
TRAM1-205ENST00000521425 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
TRAM1-205ENST00000521425 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
TRAM1-205ENST00000521425 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
TRAM1-205ENST00000521425 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
TRAM1-205ENST00000521425 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
TRAM1-205ENST00000521425 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.5
TRAM1-205ENST00000521425 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.5
TRAM1-205ENST00000521425 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
TRAM1-205ENST00000521425 HNRNPUQ00839 825 aaKnown RBP eCLIP24.43■■□□□ 1.5
TRAM1-205ENST00000521425 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
TRAM1-205ENST00000521425 CFDP1Q9UEE9 299 aaPredicted RBP24.41■■□□□ 1.5
TRAM1-205ENST00000521425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRAM1-205ENST00000521425 CASKIN1Q8WXD9 1431 aa24.39■■□□□ 1.5
TRAM1-205ENST00000521425 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
TRAM1-205ENST00000521425 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
TRAM1-205ENST00000521425 MPHOSPH9Q99550 1183 aa24.38■■□□□ 1.49
TRAM1-205ENST00000521425 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
TRAM1-205ENST00000521425 NEFLP07196 543 aa24.37■■□□□ 1.49
TRAM1-205ENST00000521425 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
TRAM1-205ENST00000521425 CDK13Q14004 1512 aaKnown RBP24.36■■□□□ 1.49
TRAM1-205ENST00000521425 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
TRAM1-205ENST00000521425 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
TRAM1-205ENST00000521425 CDK11AQ9UQ88 783 aaPredicted RBP24.31■■□□□ 1.48
TRAM1-205ENST00000521425 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
TRAM1-205ENST00000521425 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
TRAM1-205ENST00000521425 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
TRAM1-205ENST00000521425 FYCO1Q9BQS8 1478 aa24.27■■□□□ 1.48
TRAM1-205ENST00000521425 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
TRAM1-205ENST00000521425 MYOM3Q5VTT5 1437 aa24.25■■□□□ 1.47
TRAM1-205ENST00000521425 CCDC184Q52MB2 194 aa24.24■■□□□ 1.47
TRAM1-205ENST00000521425 EIF4G2P78344 907 aaKnown RBP eCLIP24.24■■□□□ 1.47
TRAM1-205ENST00000521425 HNRNPMP52272 730 aaKnown RBP eCLIP24.23■■□□□ 1.47
TRAM1-205ENST00000521425 PLEKHD1A6NEE1 506 aa24.2■■□□□ 1.46
TRAM1-205ENST00000521425 C11orf95C9JLR9 678 aaPredicted RBP24.19■■□□□ 1.46
TRAM1-205ENST00000521425 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
TRAM1-205ENST00000521425 NAIPQ13075 1403 aa24.18■■□□□ 1.46
TRAM1-205ENST00000521425 PKD2Q13563 968 aa24.18■■□□□ 1.46
TRAM1-205ENST00000521425 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
TRAM1-205ENST00000521425 MRS2Q9HD23 443 aa24.16■■□□□ 1.46
TRAM1-205ENST00000521425 NBPF8Q3BBV2 869 aa24.16■■□□□ 1.46
TRAM1-205ENST00000521425 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
TRAM1-205ENST00000521425 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
TRAM1-205ENST00000521425 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
TRAM1-205ENST00000521425 ERICH6Q7L0X2 663 aa24.12■■□□□ 1.45
TRAM1-205ENST00000521425 WASHC2AQ641Q2 1341 aa24.12■■□□□ 1.45
TRAM1-205ENST00000521425 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
TRAM1-205ENST00000521425 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
TRAM1-205ENST00000521425 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
TRAM1-205ENST00000521425 UACAQ9BZF9 1416 aa24.08■■□□□ 1.45
TRAM1-205ENST00000521425 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
TRAM1-205ENST00000521425 EFCAB5A4FU69 1503 aa24.06■■□□□ 1.44
TRAM1-205ENST00000521425 EPRSP07814 1512 aaKnown RBP24.06■■□□□ 1.44
TRAM1-205ENST00000521425 HFM1A2PYH4 1435 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms