RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
CTNNA1-227ENST00000521387 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
CTNNA1-227ENST00000521387 SOGA1O94964 1423 aa14.38□□□□□ -0.11
CTNNA1-227ENST00000521387 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
CTNNA1-227ENST00000521387 KDM6BO15054 1643 aa14.37□□□□□ -0.11
CTNNA1-227ENST00000521387 GRIN2BQ13224 1484 aa14.33□□□□□ -0.12
CTNNA1-227ENST00000521387 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
CTNNA1-227ENST00000521387 CEP170Q5SW79 1584 aa14.3□□□□□ -0.12
CTNNA1-227ENST00000521387 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
CTNNA1-227ENST00000521387 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
CTNNA1-227ENST00000521387 MAPKBP1O60336 1514 aa14.22□□□□□ -0.13
CTNNA1-227ENST00000521387 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
CTNNA1-227ENST00000521387 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
CTNNA1-227ENST00000521387 SHROOM2Q13796 1616 aa14.2□□□□□ -0.14
CTNNA1-227ENST00000521387 NUP160Q12769 1436 aa14.2□□□□□ -0.14
CTNNA1-227ENST00000521387 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
CTNNA1-227ENST00000521387 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
CTNNA1-227ENST00000521387 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
CTNNA1-227ENST00000521387 COL17A1Q9UMD9 1497 aaPredicted RBP14.15□□□□□ -0.14
CTNNA1-227ENST00000521387 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CTNNA1-227ENST00000521387 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
CTNNA1-227ENST00000521387 PRG4Q92954 1404 aaPredicted RBP14.12□□□□□ -0.15
CTNNA1-227ENST00000521387 CUX1P39880 1505 aa14.09□□□□□ -0.15
CTNNA1-227ENST00000521387 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.15
CTNNA1-227ENST00000521387 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
CTNNA1-227ENST00000521387 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
CTNNA1-227ENST00000521387 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
CTNNA1-227ENST00000521387 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
CTNNA1-227ENST00000521387 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
CTNNA1-227ENST00000521387 ADAMTS12P58397 1594 aa14□□□□□ -0.17
CTNNA1-227ENST00000521387 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
CTNNA1-227ENST00000521387 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
CTNNA1-227ENST00000521387 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
CTNNA1-227ENST00000521387 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
CTNNA1-227ENST00000521387 GLI2P10070 1586 aa13.92□□□□□ -0.18
CTNNA1-227ENST00000521387 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-227ENST00000521387 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
CTNNA1-227ENST00000521387 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
CTNNA1-227ENST00000521387 PTPRMP28827 1452 aa13.85□□□□□ -0.19
CTNNA1-227ENST00000521387 PLB1Q6P1J6 1458 aa13.83□□□□□ -0.2
CTNNA1-227ENST00000521387 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
CTNNA1-227ENST00000521387 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
CTNNA1-227ENST00000521387 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-227ENST00000521387 ABCC2Q92887 1545 aa13.8□□□□□ -0.2
CTNNA1-227ENST00000521387 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
CTNNA1-227ENST00000521387 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
CTNNA1-227ENST00000521387 EPRSP07814 1512 aaKnown RBP13.8□□□□□ -0.2
CTNNA1-227ENST00000521387 HSPA2P54652 639 aa13.79□□□□□ -0.2
CTNNA1-227ENST00000521387 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
CTNNA1-227ENST00000521387 KIF21BO75037 1637 aa13.77□□□□□ -0.21
CTNNA1-227ENST00000521387 ADAMTSL3P82987 1691 aa13.76□□□□□ -0.21
CTNNA1-227ENST00000521387 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
CTNNA1-227ENST00000521387 PTPRGP23470 1445 aa13.76□□□□□ -0.21
CTNNA1-227ENST00000521387 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
CTNNA1-227ENST00000521387 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-227ENST00000521387 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
CTNNA1-227ENST00000521387 CUL7Q14999 1698 aa13.69□□□□□ -0.22
CTNNA1-227ENST00000521387 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
CTNNA1-227ENST00000521387 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
CTNNA1-227ENST00000521387 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
CTNNA1-227ENST00000521387 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
CTNNA1-227ENST00000521387 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
CTNNA1-227ENST00000521387 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
CTNNA1-227ENST00000521387 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
CTNNA1-227ENST00000521387 BCORL1Q5H9F3 1711 aa13.59□□□□□ -0.23
CTNNA1-227ENST00000521387 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
CTNNA1-227ENST00000521387 ZCCHC11Q5TAX3 1644 aaKnown RBP13.54□□□□□ -0.24
CTNNA1-227ENST00000521387 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
CTNNA1-227ENST00000521387 RIMS1Q86UR5 1692 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-227ENST00000521387 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
CTNNA1-227ENST00000521387 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
CTNNA1-227ENST00000521387 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-227ENST00000521387 RAPGEF3O95398 923 aa13.5□□□□□ -0.25
CTNNA1-227ENST00000521387 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
CTNNA1-227ENST00000521387 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
CTNNA1-227ENST00000521387 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
CTNNA1-227ENST00000521387 IGF1RP08069 1367 aa13.47□□□□□ -0.25
CTNNA1-227ENST00000521387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.251e-7■■■□□ 16
CTNNA1-227ENST00000521387 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
CTNNA1-227ENST00000521387 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
CTNNA1-227ENST00000521387 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.25
CTNNA1-227ENST00000521387 POTEHQ6S545 545 aa13.41□□□□□ -0.26
CTNNA1-227ENST00000521387 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
CTNNA1-227ENST00000521387 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-227ENST00000521387 FRMPD1Q5SYB0 1578 aa13.39□□□□□ -0.27
CTNNA1-227ENST00000521387 PTPRTO14522 1441 aa13.38□□□□□ -0.27
CTNNA1-227ENST00000521387 PHLDB1Q86UU1 1377 aa13.36□□□□□ -0.27
CTNNA1-227ENST00000521387 IQGAP2Q13576 1575 aa13.35□□□□□ -0.27
CTNNA1-227ENST00000521387 SIGLEC1Q9BZZ2 1709 aa13.35□□□□□ -0.27
CTNNA1-227ENST00000521387 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
CTNNA1-227ENST00000521387 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-227ENST00000521387 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
CTNNA1-227ENST00000521387 HSPA1LP34931 641 aa13.31□□□□□ -0.28
CTNNA1-227ENST00000521387 TTC37Q6PGP7 1564 aa13.31□□□□□ -0.28
CTNNA1-227ENST00000521387 MLECQ14165 292 aa13.3□□□□□ -0.28
CTNNA1-227ENST00000521387 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
CTNNA1-227ENST00000521387 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
CTNNA1-227ENST00000521387 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
CTNNA1-227ENST00000521387 NEO1Q92859 1461 aa13.28□□□□□ -0.28
CTNNA1-227ENST00000521387 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms