RNA–Protein interactions for RNA: ENST00000521366.1

NECAB1-202, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene NECAB1, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-202ENST00000521366 RUSC2Q8N2Y8 1516 aa7.7□□□□□ -1.18
NECAB1-202ENST00000521366 SOGA1O94964 1423 aa7.69□□□□□ -1.18
NECAB1-202ENST00000521366 ARID3AQ99856 593 aa7.69□□□□□ -1.18
NECAB1-202ENST00000521366 PEG3Q9GZU2 1588 aa7.65□□□□□ -1.18
NECAB1-202ENST00000521366 WRNQ14191 1432 aaPredicted RBP eCLIP7.64□□□□□ -1.19
NECAB1-202ENST00000521366 NBR1Q14596 966 aa7.64□□□□□ -1.19
NECAB1-202ENST00000521366 MAPK8IP2Q13387 824 aaPredicted RBP7.63□□□□□ -1.19
NECAB1-202ENST00000521366 CADPSQ9ULU8 1353 aa7.63□□□□□ -1.19
NECAB1-202ENST00000521366 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
NECAB1-202ENST00000521366 SYNJ1O43426 1573 aa7.59□□□□□ -1.19
NECAB1-202ENST00000521366 HMGXB3Q12766 1538 aa7.59□□□□□ -1.19
NECAB1-202ENST00000521366 DMRT2Q9Y5R5 561 aa7.58□□□□□ -1.2
NECAB1-202ENST00000521366 CFTRP13569 1480 aa7.57□□□□□ -1.2
NECAB1-202ENST00000521366 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
NECAB1-202ENST00000521366 P3H3Q8IVL6 736 aa7.56□□□□□ -1.2
NECAB1-202ENST00000521366 FANCD2Q9BXW9 1451 aa7.56□□□□□ -1.2
NECAB1-202ENST00000521366 RAD54L2Q9Y4B4 1467 aa7.55□□□□□ -1.2
NECAB1-202ENST00000521366 SLC4A2P04920 1241 aa7.55□□□□□ -1.2
NECAB1-202ENST00000521366 TDRD9Q8NDG6 1382 aaKnown RBP7.55□□□□□ -1.2
NECAB1-202ENST00000521366 CUX1P39880 1505 aa7.54□□□□□ -1.2
NECAB1-202ENST00000521366 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.53□□□□□ -1.2
NECAB1-202ENST00000521366 ATF5Q9Y2D1 282 aaPredicted RBP7.53□□□□□ -1.2
NECAB1-202ENST00000521366 IGSF3O75054 1194 aa7.52□□□□□ -1.21
NECAB1-202ENST00000521366 RNF39Q9H2S5 420 aa7.52□□□□□ -1.21
NECAB1-202ENST00000521366 ATP1B4Q9UN42 357 aaPredicted RBP7.51□□□□□ -1.21
NECAB1-202ENST00000521366 CUX2O14529 1486 aa7.49□□□□□ -1.21
NECAB1-202ENST00000521366 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
NECAB1-202ENST00000521366 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
NECAB1-202ENST00000521366 FGD5Q6ZNL6 1462 aa7.48□□□□□ -1.21
NECAB1-202ENST00000521366 CNKSR2Q8WXI2 1034 aa7.48□□□□□ -1.21
NECAB1-202ENST00000521366 RAPGEF2Q9Y4G8 1499 aa7.47□□□□□ -1.21
NECAB1-202ENST00000521366 VASPP50552 380 aaPredicted RBP7.47□□□□□ -1.21
NECAB1-202ENST00000521366 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
NECAB1-202ENST00000521366 URB2Q14146 1524 aaKnown RBP7.47□□□□□ -1.21
NECAB1-202ENST00000521366 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
NECAB1-202ENST00000521366 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.21
NECAB1-202ENST00000521366 RGL2O15211 777 aa7.46□□□□□ -1.21
NECAB1-202ENST00000521366 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.21
NECAB1-202ENST00000521366 PDS5BQ9NTI5 1447 aa7.46□□□□□ -1.22
NECAB1-202ENST00000521366 BRPF1P55201 1214 aaPredicted RBP7.46□□□□□ -1.22
NECAB1-202ENST00000521366 NECTIN2Q92692 538 aa7.46□□□□□ -1.22
NECAB1-202ENST00000521366 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.22
NECAB1-202ENST00000521366 DCAF8L1A6NGE4 600 aa7.45□□□□□ -1.22
NECAB1-202ENST00000521366 FBXO3Q9UK99 471 aa7.45□□□□□ -1.22
NECAB1-202ENST00000521366 SPRYD3Q8NCJ5 442 aa7.45□□□□□ -1.22
NECAB1-202ENST00000521366 TOPBP1Q92547 1522 aa7.44□□□□□ -1.22
NECAB1-202ENST00000521366 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
NECAB1-202ENST00000521366 KIF21AQ7Z4S6 1674 aa7.43□□□□□ -1.22
NECAB1-202ENST00000521366 IGF1RP08069 1367 aa7.43□□□□□ -1.22
NECAB1-202ENST00000521366 TOP2BQ02880 1626 aa7.43□□□□□ -1.22
NECAB1-202ENST00000521366 KIF27Q86VH2 1401 aa7.41□□□□□ -1.22
NECAB1-202ENST00000521366 ZNF608Q9ULD9 1512 aaPredicted RBP7.41□□□□□ -1.22
NECAB1-202ENST00000521366 CEP162Q5TB80 1403 aa7.41□□□□□ -1.22
NECAB1-202ENST00000521366 CARMIL1Q5VZK9 1371 aa7.4□□□□□ -1.23
NECAB1-202ENST00000521366 LAMC3Q9Y6N6 1575 aa7.39□□□□□ -1.23
NECAB1-202ENST00000521366 ECM2O94769 699 aaPredicted RBP7.38□□□□□ -1.23
NECAB1-202ENST00000521366 CHGAP10645 457 aaKnown RBP7.37□□□□□ -1.23
NECAB1-202ENST00000521366 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
NECAB1-202ENST00000521366 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
NECAB1-202ENST00000521366 ITGAEP38570 1179 aa7.36□□□□□ -1.23
NECAB1-202ENST00000521366 CLIP1P30622 1438 aa7.36□□□□□ -1.23
NECAB1-202ENST00000521366 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
NECAB1-202ENST00000521366 TNIKQ9UKE5 1360 aa7.35□□□□□ -1.23
NECAB1-202ENST00000521366 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
NECAB1-202ENST00000521366 DNMBPQ6XZF7 1577 aa7.35□□□□□ -1.23
NECAB1-202ENST00000521366 BIVM-ERCC5R4GMW8 1640 aa7.35□□□□□ -1.23
NECAB1-202ENST00000521366 HNRNPUL2Q1KMD3 747 aaKnown RBP7.34□□□□□ -1.23
NECAB1-202ENST00000521366 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
NECAB1-202ENST00000521366 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
NECAB1-202ENST00000521366 GAPVD1Q14C86 1478 aa7.33□□□□□ -1.24
NECAB1-202ENST00000521366 NEUROD2Q15784 382 aa7.33□□□□□ -1.24
NECAB1-202ENST00000521366 C1QBPQ07021 282 aaKnown RBP7.32□□□□□ -1.24
NECAB1-202ENST00000521366 PRXQ9BXM0 1461 aa7.32□□□□□ -1.24
NECAB1-202ENST00000521366 EEA1Q15075 1411 aa7.32□□□□□ -1.24
NECAB1-202ENST00000521366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
NECAB1-202ENST00000521366 FHOD3Q2V2M9 1422 aa7.29□□□□□ -1.24
NECAB1-202ENST00000521366 ABCA10Q8WWZ4 1543 aa7.29□□□□□ -1.24
NECAB1-202ENST00000521366 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
NECAB1-202ENST00000521366 PRDM2Q13029 1718 aa7.27□□□□□ -1.24
NECAB1-202ENST00000521366 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.25
NECAB1-202ENST00000521366 DNAJC5Q9H3Z4 198 aa7.27□□□□□ -1.25
NECAB1-202ENST00000521366 FOXD4L5Q5VV16 416 aaPredicted RBP7.26□□□□□ -1.25
NECAB1-202ENST00000521366 FOXD4L4Q8WXT5 416 aaPredicted RBP7.26□□□□□ -1.25
NECAB1-202ENST00000521366 SNAPC4Q5SXM2 1469 aa7.26□□□□□ -1.25
NECAB1-202ENST00000521366 CCDC9Q9Y3X0 531 aaKnown RBP7.26□□□□□ -1.25
NECAB1-202ENST00000521366 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
NECAB1-202ENST00000521366 MYCNP04198 464 aaPredicted RBP7.24□□□□□ -1.25
NECAB1-202ENST00000521366 KIF21BO75037 1637 aa7.24□□□□□ -1.25
NECAB1-202ENST00000521366 ARHGAP35Q9NRY4 1499 aa7.24□□□□□ -1.25
NECAB1-202ENST00000521366 SPDYE4A6NLX3 237 aa7.23□□□□□ -1.25
NECAB1-202ENST00000521366 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
NECAB1-202ENST00000521366 JPH4Q96JJ6 628 aa7.23□□□□□ -1.25
NECAB1-202ENST00000521366 WDR62O43379 1518 aa7.23□□□□□ -1.25
NECAB1-202ENST00000521366 THOC2Q8NI27 1593 aaKnown RBP7.22□□□□□ -1.25
NECAB1-202ENST00000521366 IFT140Q96RY7 1462 aa7.22□□□□□ -1.25
NECAB1-202ENST00000521366 APBB1O00213 710 aa7.22□□□□□ -1.25
NECAB1-202ENST00000521366 LMOD2Q6P5Q4 547 aa7.22□□□□□ -1.25
NECAB1-202ENST00000521366 FAM50AQ14320 339 aaKnown RBP7.22□□□□□ -1.25
NECAB1-202ENST00000521366 GRIN2BQ13224 1484 aa7.22□□□□□ -1.25
NECAB1-202ENST00000521366 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms