RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 GOLGA3Q08378 1498 aa28.56■■■□□ 2.16
TRAM1-203ENST00000520700 JPH4Q96JJ6 628 aa28.56■■■□□ 2.16
TRAM1-203ENST00000520700 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
TRAM1-203ENST00000520700 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
TRAM1-203ENST00000520700 CTTNBP2Q8WZ74 1663 aa28.44■■■□□ 2.14
TRAM1-203ENST00000520700 UBTFP17480 764 aaKnown RBP28.43■■■□□ 2.14
TRAM1-203ENST00000520700 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
TRAM1-203ENST00000520700 UGGT2Q9NYU1 1516 aa28.41■■■□□ 2.14
TRAM1-203ENST00000520700 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
TRAM1-203ENST00000520700 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
TRAM1-203ENST00000520700 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
TRAM1-203ENST00000520700 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
TRAM1-203ENST00000520700 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
TRAM1-203ENST00000520700 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
TRAM1-203ENST00000520700 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
TRAM1-203ENST00000520700 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
TRAM1-203ENST00000520700 ERCC6L2Q5T890 1561 aa28.29■■■□□ 2.12
TRAM1-203ENST00000520700 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
TRAM1-203ENST00000520700 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
TRAM1-203ENST00000520700 KIAA0556O60303 1618 aa28.2■■■□□ 2.1
TRAM1-203ENST00000520700 SAMD9Q5K651 1589 aa28.19■■■□□ 2.1
TRAM1-203ENST00000520700 EFCAB5A4FU69 1503 aa28.17■■■□□ 2.1
TRAM1-203ENST00000520700 PTPRGP23470 1445 aa28.16■■■□□ 2.1
TRAM1-203ENST00000520700 CYB5RLQ6IPT4 315 aa28.15■■■□□ 2.1
TRAM1-203ENST00000520700 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
TRAM1-203ENST00000520700 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
TRAM1-203ENST00000520700 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
TRAM1-203ENST00000520700 CLIP1P30622 1438 aa28.05■■■□□ 2.08
TRAM1-203ENST00000520700 CEP162Q5TB80 1403 aa28.01■■■□□ 2.08
TRAM1-203ENST00000520700 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.07
TRAM1-203ENST00000520700 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
TRAM1-203ENST00000520700 UHRF1BP1LA0JNW5 1464 aa27.97■■■□□ 2.07
TRAM1-203ENST00000520700 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
TRAM1-203ENST00000520700 FMN1Q68DA7 1419 aa27.93■■■□□ 2.06
TRAM1-203ENST00000520700 ABCA8O94911 1581 aa27.91■■■□□ 2.06
TRAM1-203ENST00000520700 PLB1Q6P1J6 1458 aa27.89■■■□□ 2.06
TRAM1-203ENST00000520700 ABCC2Q92887 1545 aa27.89■■■□□ 2.06
TRAM1-203ENST00000520700 ADCY10Q96PN6 1610 aa27.87■■■□□ 2.05
TRAM1-203ENST00000520700 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRAM1-203ENST00000520700 KDM5BQ9UGL1 1544 aa27.81■■■□□ 2.04
TRAM1-203ENST00000520700 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
TRAM1-203ENST00000520700 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
TRAM1-203ENST00000520700 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
TRAM1-203ENST00000520700 ATP10BO94823 1461 aa27.71■■■□□ 2.03
TRAM1-203ENST00000520700 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
TRAM1-203ENST00000520700 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
TRAM1-203ENST00000520700 FYCO1Q9BQS8 1478 aa27.68■■■□□ 2.02
TRAM1-203ENST00000520700 HECW1Q76N89 1606 aa27.66■■■□□ 2.02
TRAM1-203ENST00000520700 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
TRAM1-203ENST00000520700 PCF11O94913 1555 aaKnown RBP27.63■■■□□ 2.01
TRAM1-203ENST00000520700 EPRSP07814 1512 aaKnown RBP27.62■■■□□ 2.01
TRAM1-203ENST00000520700 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
TRAM1-203ENST00000520700 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
TRAM1-203ENST00000520700 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
TRAM1-203ENST00000520700 ARID3CA6NKF2 412 aa27.57■■■□□ 2
TRAM1-203ENST00000520700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
TRAM1-203ENST00000520700 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
TRAM1-203ENST00000520700 CDK11AQ9UQ88 783 aaPredicted RBP27.55■■■□□ 2
TRAM1-203ENST00000520700 PLEKHD1A6NEE1 506 aa27.54■■■□□ 2
TRAM1-203ENST00000520700 CDK13Q14004 1512 aaKnown RBP27.52■■■□□ 2
TRAM1-203ENST00000520700 WDR7Q9Y4E6 1490 aa27.52■■■□□ 2
TRAM1-203ENST00000520700 ABCC10Q5T3U5 1492 aa27.51■■□□□ 1.99
TRAM1-203ENST00000520700 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
TRAM1-203ENST00000520700 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
TRAM1-203ENST00000520700 GLI2P10070 1586 aa27.42■■□□□ 1.98
TRAM1-203ENST00000520700 TROQ12816 1431 aaPredicted RBP27.41■■□□□ 1.98
TRAM1-203ENST00000520700 FAM69CQ0P6D2 419 aa27.41■■□□□ 1.98
TRAM1-203ENST00000520700 DIP2BQ9P265 1576 aa27.4■■□□□ 1.98
TRAM1-203ENST00000520700 KCNH8Q96L42 1107 aa27.4■■□□□ 1.98
TRAM1-203ENST00000520700 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
TRAM1-203ENST00000520700 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
TRAM1-203ENST00000520700 APLP2Q06481 763 aa27.35■■□□□ 1.97
TRAM1-203ENST00000520700 MAGI3Q5TCQ9 1506 aa27.34■■□□□ 1.97
TRAM1-203ENST00000520700 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
TRAM1-203ENST00000520700 CFAP43Q8NDM7 1665 aa27.32■■□□□ 1.96
TRAM1-203ENST00000520700 MTUS2Q5JR59 1369 aa27.31■■□□□ 1.96
TRAM1-203ENST00000520700 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
TRAM1-203ENST00000520700 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
TRAM1-203ENST00000520700 EHBP1L1Q8N3D4 1523 aa27.26■■□□□ 1.96
TRAM1-203ENST00000520700 KANK4Q5T7N3 995 aaPredicted RBP27.25■■□□□ 1.95
TRAM1-203ENST00000520700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.25■■□□□ 1.95
TRAM1-203ENST00000520700 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
TRAM1-203ENST00000520700 MAP3K4Q9Y6R4 1608 aa27.24■■□□□ 1.95
TRAM1-203ENST00000520700 KIF14Q15058 1648 aa27.23■■□□□ 1.95
TRAM1-203ENST00000520700 PLCH2O75038 1416 aa27.16■■□□□ 1.94
TRAM1-203ENST00000520700 TTC37Q6PGP7 1564 aa27.15■■□□□ 1.94
TRAM1-203ENST00000520700 ARAP3Q8WWN8 1544 aa27.14■■□□□ 1.94
TRAM1-203ENST00000520700 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
TRAM1-203ENST00000520700 NCOA2Q15596 1464 aa27.12■■□□□ 1.93
TRAM1-203ENST00000520700 PHLDB1Q86UU1 1377 aa27.11■■□□□ 1.93
TRAM1-203ENST00000520700 SUPT6HQ7KZ85 1726 aaKnown RBP27.11■■□□□ 1.93
TRAM1-203ENST00000520700 PPRC1Q5VV67 1664 aaKnown RBP27.11■■□□□ 1.93
TRAM1-203ENST00000520700 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
TRAM1-203ENST00000520700 GPATCH8Q9UKJ3 1502 aaKnown RBP27.09■■□□□ 1.93
TRAM1-203ENST00000520700 EFCAB2Q5VUJ9 269 aa27.07■■□□□ 1.92
TRAM1-203ENST00000520700 NEO1Q92859 1461 aa27.06■■□□□ 1.92
TRAM1-203ENST00000520700 TSPOAP1O95153 1857 aa27.04■■□□□ 1.92
TRAM1-203ENST00000520700 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
TRAM1-203ENST00000520700 FANCAO15360 1455 aa27.02■■□□□ 1.92
TRAM1-203ENST00000520700 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms