RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 FBXO41Q8TF61 875 aa15.44■□□□□ 0.06
SPARC-202ENST00000520687 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
SPARC-202ENST00000520687 MAGI1Q96QZ7 1491 aaPredicted RBP15.42■□□□□ 0.06
SPARC-202ENST00000520687 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
SPARC-202ENST00000520687 CLIP1P30622 1438 aa15.4■□□□□ 0.06
SPARC-202ENST00000520687 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
SPARC-202ENST00000520687 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
SPARC-202ENST00000520687 HECW2Q9P2P5 1572 aa15.37■□□□□ 0.05
SPARC-202ENST00000520687 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
SPARC-202ENST00000520687 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
SPARC-202ENST00000520687 KDM6BO15054 1643 aa15.35■□□□□ 0.05
SPARC-202ENST00000520687 LMTK3Q96Q04 1460 aa15.35■□□□□ 0.05
SPARC-202ENST00000520687 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
SPARC-202ENST00000520687 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.05
SPARC-202ENST00000520687 IGF1RP08069 1367 aa15.31■□□□□ 0.04
SPARC-202ENST00000520687 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
SPARC-202ENST00000520687 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
SPARC-202ENST00000520687 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
SPARC-202ENST00000520687 ABCC10Q5T3U5 1492 aa15.28■□□□□ 0.04
SPARC-202ENST00000520687 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
SPARC-202ENST00000520687 APLP2Q06481 763 aa15.26■□□□□ 0.03
SPARC-202ENST00000520687 ADGRL1O94910 1474 aa15.25■□□□□ 0.03
SPARC-202ENST00000520687 SOCS7O14512 581 aa15.24■□□□□ 0.03
SPARC-202ENST00000520687 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
SPARC-202ENST00000520687 CUL7Q14999 1698 aa15.22■□□□□ 0.03
SPARC-202ENST00000520687 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
SPARC-202ENST00000520687 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
SPARC-202ENST00000520687 DIP2BQ9P265 1576 aa15.2■□□□□ 0.02
SPARC-202ENST00000520687 PPARGC1BQ86YN6 1023 aaKnown RBP15.19■□□□□ 0.02
SPARC-202ENST00000520687 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
SPARC-202ENST00000520687 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
SPARC-202ENST00000520687 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPARC-202ENST00000520687 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
SPARC-202ENST00000520687 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
SPARC-202ENST00000520687 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
SPARC-202ENST00000520687 TSPOAP1O95153 1857 aa15.08■□□□□ 0.01
SPARC-202ENST00000520687 MAP3K1Q13233 1512 aa15.08■□□□□ 0
SPARC-202ENST00000520687 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
SPARC-202ENST00000520687 NUP160Q12769 1436 aa15.07■□□□□ 0
SPARC-202ENST00000520687 FHAD1B1AJZ9 1412 aa15.05■□□□□ 0
SPARC-202ENST00000520687 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
SPARC-202ENST00000520687 ILDR2Q71H61 639 aa15.05■□□□□ -0
SPARC-202ENST00000520687 EFCAB5A4FU69 1503 aa15.04■□□□□ -0
SPARC-202ENST00000520687 DISP3Q9P2K9 1392 aa15.04■□□□□ -0
SPARC-202ENST00000520687 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
SPARC-202ENST00000520687 ADAMTS12P58397 1594 aa14.99□□□□□ -0.01
SPARC-202ENST00000520687 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
SPARC-202ENST00000520687 TTBK1Q5TCY1 1321 aaPredicted RBP14.99□□□□□ -0.01
SPARC-202ENST00000520687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
SPARC-202ENST00000520687 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
SPARC-202ENST00000520687 RRBP1Q9P2E9 1410 aaKnown RBP14.94□□□□□ -0.02
SPARC-202ENST00000520687 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
SPARC-202ENST00000520687 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
SPARC-202ENST00000520687 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
SPARC-202ENST00000520687 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
SPARC-202ENST00000520687 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
SPARC-202ENST00000520687 JPH4Q96JJ6 628 aa14.88□□□□□ -0.03
SPARC-202ENST00000520687 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
SPARC-202ENST00000520687 PPRC1Q5VV67 1664 aaKnown RBP14.88□□□□□ -0.03
SPARC-202ENST00000520687 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
SPARC-202ENST00000520687 SAMD9Q5K651 1589 aa14.87□□□□□ -0.03
SPARC-202ENST00000520687 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
SPARC-202ENST00000520687 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
SPARC-202ENST00000520687 GLI2P10070 1586 aa14.85□□□□□ -0.03
SPARC-202ENST00000520687 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
SPARC-202ENST00000520687 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
SPARC-202ENST00000520687 COL17A1Q9UMD9 1497 aaPredicted RBP14.83□□□□□ -0.04
SPARC-202ENST00000520687 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
SPARC-202ENST00000520687 CFAP43Q8NDM7 1665 aa14.82□□□□□ -0.04
SPARC-202ENST00000520687 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
SPARC-202ENST00000520687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPARC-202ENST00000520687 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
SPARC-202ENST00000520687 PLB1Q6P1J6 1458 aa14.79□□□□□ -0.04
SPARC-202ENST00000520687 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
SPARC-202ENST00000520687 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
SPARC-202ENST00000520687 CERKQ8TCT0 537 aa14.76□□□□□ -0.05
SPARC-202ENST00000520687 KIAA0586Q9BVV6 1533 aa14.75□□□□□ -0.05
SPARC-202ENST00000520687 ASXL2Q76L83 1435 aa14.74□□□□□ -0.05
SPARC-202ENST00000520687 CCDC18Q5T9S5 1454 aa14.73□□□□□ -0.05
SPARC-202ENST00000520687 MAP3K4Q9Y6R4 1608 aa14.72□□□□□ -0.05
SPARC-202ENST00000520687 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
SPARC-202ENST00000520687 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.05
SPARC-202ENST00000520687 PHLDB1Q86UU1 1377 aa14.71□□□□□ -0.06
SPARC-202ENST00000520687 PTPRMP28827 1452 aa14.69□□□□□ -0.06
SPARC-202ENST00000520687 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
SPARC-202ENST00000520687 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
SPARC-202ENST00000520687 DHX57Q6P158 1386 aaKnown RBP14.67□□□□□ -0.06
SPARC-202ENST00000520687 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
SPARC-202ENST00000520687 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
SPARC-202ENST00000520687 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
SPARC-202ENST00000520687 EPRSP07814 1512 aaKnown RBP14.65□□□□□ -0.06
SPARC-202ENST00000520687 LRRIQ1Q96JM4 1722 aa14.64□□□□□ -0.07
SPARC-202ENST00000520687 PTPRGP23470 1445 aa14.64□□□□□ -0.07
SPARC-202ENST00000520687 FGD6Q6ZV73 1430 aa14.63□□□□□ -0.07
SPARC-202ENST00000520687 DISP1Q96F81 1524 aa14.63□□□□□ -0.07
SPARC-202ENST00000520687 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
SPARC-202ENST00000520687 ADAMTSL3P82987 1691 aa14.61□□□□□ -0.07
SPARC-202ENST00000520687 ZNF316A6NFI3 1004 aaPredicted RBP14.6□□□□□ -0.07
SPARC-202ENST00000520687 MYOM3Q5VTT5 1437 aa14.6□□□□□ -0.07
SPARC-202ENST00000520687 SUPT6HQ7KZ85 1726 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms