RNA–Protein interactions for RNA: ENST00000520655.5

IKBKB-216, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,777 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-216ENST00000520655 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
IKBKB-216ENST00000520655 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
IKBKB-216ENST00000520655 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
IKBKB-216ENST00000520655 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
IKBKB-216ENST00000520655 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
IKBKB-216ENST00000520655 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
IKBKB-216ENST00000520655 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
IKBKB-216ENST00000520655 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
IKBKB-216ENST00000520655 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
IKBKB-216ENST00000520655 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
IKBKB-216ENST00000520655 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
IKBKB-216ENST00000520655 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
IKBKB-216ENST00000520655 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
IKBKB-216ENST00000520655 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
IKBKB-216ENST00000520655 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
IKBKB-216ENST00000520655 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
IKBKB-216ENST00000520655 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
IKBKB-216ENST00000520655 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
IKBKB-216ENST00000520655 KIF21BO75037 1637 aa16.83■□□□□ 0.28
IKBKB-216ENST00000520655 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
IKBKB-216ENST00000520655 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
IKBKB-216ENST00000520655 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
IKBKB-216ENST00000520655 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
IKBKB-216ENST00000520655 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
IKBKB-216ENST00000520655 WDR62O43379 1518 aa16.76■□□□□ 0.27
IKBKB-216ENST00000520655 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
IKBKB-216ENST00000520655 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-216ENST00000520655 PTPRGP23470 1445 aa16.74■□□□□ 0.27
IKBKB-216ENST00000520655 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-216ENST00000520655 FMN1Q68DA7 1419 aa16.72■□□□□ 0.27
IKBKB-216ENST00000520655 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
IKBKB-216ENST00000520655 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
IKBKB-216ENST00000520655 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
IKBKB-216ENST00000520655 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
IKBKB-216ENST00000520655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■□□□ 12.3
IKBKB-216ENST00000520655 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
IKBKB-216ENST00000520655 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
IKBKB-216ENST00000520655 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
IKBKB-216ENST00000520655 MYT1Q01538 1121 aa16.64■□□□□ 0.25
IKBKB-216ENST00000520655 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
IKBKB-216ENST00000520655 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
IKBKB-216ENST00000520655 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
IKBKB-216ENST00000520655 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
IKBKB-216ENST00000520655 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
IKBKB-216ENST00000520655 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
IKBKB-216ENST00000520655 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
IKBKB-216ENST00000520655 CUL7Q14999 1698 aa16.6■□□□□ 0.25
IKBKB-216ENST00000520655 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
IKBKB-216ENST00000520655 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
IKBKB-216ENST00000520655 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
IKBKB-216ENST00000520655 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
IKBKB-216ENST00000520655 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
IKBKB-216ENST00000520655 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■■■■□ 24.6
IKBKB-216ENST00000520655 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
IKBKB-216ENST00000520655 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
IKBKB-216ENST00000520655 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
IKBKB-216ENST00000520655 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
IKBKB-216ENST00000520655 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
IKBKB-216ENST00000520655 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
IKBKB-216ENST00000520655 FOXD1Q16676 465 aa16.52■□□□□ 0.24
IKBKB-216ENST00000520655 CASKIN1Q8WXD9 1431 aa16.5■□□□□ 0.23
IKBKB-216ENST00000520655 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
IKBKB-216ENST00000520655 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
IKBKB-216ENST00000520655 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
IKBKB-216ENST00000520655 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
IKBKB-216ENST00000520655 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
IKBKB-216ENST00000520655 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
IKBKB-216ENST00000520655 MLECQ14165 292 aa16.42■□□□□ 0.22
IKBKB-216ENST00000520655 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
IKBKB-216ENST00000520655 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
IKBKB-216ENST00000520655 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
IKBKB-216ENST00000520655 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
IKBKB-216ENST00000520655 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
IKBKB-216ENST00000520655 NCOA2Q15596 1464 aa16.4■□□□□ 0.22
IKBKB-216ENST00000520655 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
IKBKB-216ENST00000520655 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
IKBKB-216ENST00000520655 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
IKBKB-216ENST00000520655 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
IKBKB-216ENST00000520655 NUP160Q12769 1436 aa16.38■□□□□ 0.21
IKBKB-216ENST00000520655 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
IKBKB-216ENST00000520655 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
IKBKB-216ENST00000520655 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
IKBKB-216ENST00000520655 KDM2AQ9Y2K7 1162 aa16.37■□□□□ 0.21
IKBKB-216ENST00000520655 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
IKBKB-216ENST00000520655 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
IKBKB-216ENST00000520655 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
IKBKB-216ENST00000520655 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
IKBKB-216ENST00000520655 RGL3Q3MIN7 710 aa16.36■□□□□ 0.21
IKBKB-216ENST00000520655 GGT6Q6P531 493 aa16.34■□□□□ 0.21
IKBKB-216ENST00000520655 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
IKBKB-216ENST00000520655 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.21
IKBKB-216ENST00000520655 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
IKBKB-216ENST00000520655 CHD1O14646 1710 aa16.32■□□□□ 0.2
IKBKB-216ENST00000520655 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
IKBKB-216ENST00000520655 NUP153P49790 1475 aaKnown RBP16.3■□□□□ 0.2
IKBKB-216ENST00000520655 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
IKBKB-216ENST00000520655 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
IKBKB-216ENST00000520655 KIAA0556O60303 1618 aa16.29■□□□□ 0.2
IKBKB-216ENST00000520655 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
IKBKB-216ENST00000520655 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms