RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 EFCAB5A4FU69 1503 aa24.01■■□□□ 1.43
CCNC-209ENST00000520371 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
CCNC-209ENST00000520371 YTHDC1Q96MU7 727 aaKnown RBP23.99■■□□□ 1.43
CCNC-209ENST00000520371 CUL7Q14999 1698 aa23.98■■□□□ 1.43
CCNC-209ENST00000520371 CFAP43Q8NDM7 1665 aa23.98■■□□□ 1.43
CCNC-209ENST00000520371 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
CCNC-209ENST00000520371 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.43
CCNC-209ENST00000520371 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.43
CCNC-209ENST00000520371 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
CCNC-209ENST00000520371 ITGAEP38570 1179 aa23.95■■□□□ 1.42
CCNC-209ENST00000520371 FYCO1Q9BQS8 1478 aa23.95■■□□□ 1.42
CCNC-209ENST00000520371 PCF11O94913 1555 aaKnown RBP23.93■■□□□ 1.42
CCNC-209ENST00000520371 PHLDB1Q86UU1 1377 aa23.92■■□□□ 1.42
CCNC-209ENST00000520371 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
CCNC-209ENST00000520371 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
CCNC-209ENST00000520371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.89■■□□□ 1.41
CCNC-209ENST00000520371 FHOD3Q2V2M9 1422 aa23.86■■□□□ 1.41
CCNC-209ENST00000520371 FMN1Q68DA7 1419 aa23.86■■□□□ 1.41
CCNC-209ENST00000520371 NESP48681 1621 aa23.85■■□□□ 1.41
CCNC-209ENST00000520371 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
CCNC-209ENST00000520371 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
CCNC-209ENST00000520371 CTTNBP2Q8WZ74 1663 aa23.84■■□□□ 1.41
CCNC-209ENST00000520371 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.41
CCNC-209ENST00000520371 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
CCNC-209ENST00000520371 TIMELESSQ9UNS1 1208 aa23.81■■□□□ 1.4
CCNC-209ENST00000520371 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
CCNC-209ENST00000520371 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
CCNC-209ENST00000520371 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
CCNC-209ENST00000520371 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
CCNC-209ENST00000520371 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
CCNC-209ENST00000520371 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
CCNC-209ENST00000520371 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
CCNC-209ENST00000520371 FGD6Q6ZV73 1430 aa23.68■■□□□ 1.38
CCNC-209ENST00000520371 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
CCNC-209ENST00000520371 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
CCNC-209ENST00000520371 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
CCNC-209ENST00000520371 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
CCNC-209ENST00000520371 SIN3AQ96ST3 1273 aa23.58■■□□□ 1.36
CCNC-209ENST00000520371 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
CCNC-209ENST00000520371 KIF21AQ7Z4S6 1674 aa23.56■■□□□ 1.36
CCNC-209ENST00000520371 MYOM3Q5VTT5 1437 aa23.55■■□□□ 1.36
CCNC-209ENST00000520371 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
CCNC-209ENST00000520371 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
CCNC-209ENST00000520371 CCDC18Q5T9S5 1454 aa23.53■■□□□ 1.36
CCNC-209ENST00000520371 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
CCNC-209ENST00000520371 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
CCNC-209ENST00000520371 UACAQ9BZF9 1416 aa23.51■■□□□ 1.35
CCNC-209ENST00000520371 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
CCNC-209ENST00000520371 PTPN23Q9H3S7 1636 aa23.47■■□□□ 1.35
CCNC-209ENST00000520371 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
CCNC-209ENST00000520371 LRRIQ1Q96JM4 1722 aa23.45■■□□□ 1.34
CCNC-209ENST00000520371 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
CCNC-209ENST00000520371 UGGT2Q9NYU1 1516 aa23.44■■□□□ 1.34
CCNC-209ENST00000520371 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
CCNC-209ENST00000520371 NAIPQ13075 1403 aa23.43■■□□□ 1.34
CCNC-209ENST00000520371 HECW1Q76N89 1606 aa23.42■■□□□ 1.34
CCNC-209ENST00000520371 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
CCNC-209ENST00000520371 IQGAP2Q13576 1575 aa23.39■■□□□ 1.33
CCNC-209ENST00000520371 TCOF1Q13428 1488 aaKnown RBP23.39■■□□□ 1.33
CCNC-209ENST00000520371 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
CCNC-209ENST00000520371 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
CCNC-209ENST00000520371 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
CCNC-209ENST00000520371 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
CCNC-209ENST00000520371 SUPT16HQ9Y5B9 1047 aaKnown RBP23.35■■□□□ 1.33
CCNC-209ENST00000520371 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
CCNC-209ENST00000520371 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
CCNC-209ENST00000520371 EPRSP07814 1512 aaKnown RBP23.32■■□□□ 1.32
CCNC-209ENST00000520371 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
CCNC-209ENST00000520371 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
CCNC-209ENST00000520371 ANP32CO43423 234 aa23.3■■□□□ 1.32
CCNC-209ENST00000520371 MYT1Q01538 1121 aa23.27■■□□□ 1.32
CCNC-209ENST00000520371 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
CCNC-209ENST00000520371 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
CCNC-209ENST00000520371 WDR62O43379 1518 aa23.26■■□□□ 1.31
CCNC-209ENST00000520371 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
CCNC-209ENST00000520371 RRP7BPQ9NSQ0 103 aa23.2■■□□□ 1.3
CCNC-209ENST00000520371 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
CCNC-209ENST00000520371 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
CCNC-209ENST00000520371 CDK13Q14004 1512 aaKnown RBP23.18■■□□□ 1.3
CCNC-209ENST00000520371 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
CCNC-209ENST00000520371 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
CCNC-209ENST00000520371 ROCK1Q13464 1354 aa23.16■■□□□ 1.3
CCNC-209ENST00000520371 TRIM52Q96A61 297 aa23.16■■□□□ 1.3
CCNC-209ENST00000520371 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
CCNC-209ENST00000520371 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
CCNC-209ENST00000520371 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
CCNC-209ENST00000520371 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
CCNC-209ENST00000520371 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
CCNC-209ENST00000520371 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
CCNC-209ENST00000520371 DAPK1P53355 1430 aa23.08■■□□□ 1.28
CCNC-209ENST00000520371 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
CCNC-209ENST00000520371 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
CCNC-209ENST00000520371 RAPGEF6Q8TEU7 1601 aa23.04■■□□□ 1.28
CCNC-209ENST00000520371 KDM6BO15054 1643 aa23.04■■□□□ 1.28
CCNC-209ENST00000520371 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
CCNC-209ENST00000520371 EIF4G2P78344 907 aaKnown RBP eCLIP23.04■■□□□ 1.28
CCNC-209ENST00000520371 NEFLP07196 543 aa23.03■■□□□ 1.28
CCNC-209ENST00000520371 ABCC5O15440 1437 aa23.02■■□□□ 1.28
CCNC-209ENST00000520371 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
CCNC-209ENST00000520371 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms