RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
CTNNA1-220ENST00000520260 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-220ENST00000520260 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
CTNNA1-220ENST00000520260 AQRO60306 1485 aaKnown RBP eCLIP9.35□□□□□ -0.918e-7■■■■■ 28.7
CTNNA1-220ENST00000520260 ABCA5Q8WWZ7 1642 aa9.35□□□□□ -0.91
CTNNA1-220ENST00000520260 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
CTNNA1-220ENST00000520260 EEA1Q15075 1411 aa9.34□□□□□ -0.91
CTNNA1-220ENST00000520260 FBLN2P98095 1184 aa9.34□□□□□ -0.91
CTNNA1-220ENST00000520260 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
CTNNA1-220ENST00000520260 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
CTNNA1-220ENST00000520260 CUL7Q14999 1698 aa9.32□□□□□ -0.92
CTNNA1-220ENST00000520260 FHAD1B1AJZ9 1412 aa9.32□□□□□ -0.92
CTNNA1-220ENST00000520260 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
CTNNA1-220ENST00000520260 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-220ENST00000520260 ADAMTS12P58397 1594 aa9.28□□□□□ -0.92
CTNNA1-220ENST00000520260 DNAJC5Q9H3Z4 198 aa9.27□□□□□ -0.93
CTNNA1-220ENST00000520260 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
CTNNA1-220ENST00000520260 CHD1O14646 1710 aa9.25□□□□□ -0.93
CTNNA1-220ENST00000520260 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
CTNNA1-220ENST00000520260 IGF1RP08069 1367 aa9.22□□□□□ -0.93
CTNNA1-220ENST00000520260 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
CTNNA1-220ENST00000520260 ABCB7O75027 752 aa9.2□□□□□ -0.94
CTNNA1-220ENST00000520260 CSRNP3Q8WYN3 585 aa9.19□□□□□ -0.94
CTNNA1-220ENST00000520260 NUP160Q12769 1436 aa9.19□□□□□ -0.94
CTNNA1-220ENST00000520260 CARMIL2Q6F5E8 1435 aa9.18□□□□□ -0.94
CTNNA1-220ENST00000520260 CLASP1Q7Z460 1538 aa9.17□□□□□ -0.94
CTNNA1-220ENST00000520260 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
CTNNA1-220ENST00000520260 GOLGA3Q08378 1498 aa9.15□□□□□ -0.94
CTNNA1-220ENST00000520260 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-220ENST00000520260 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
CTNNA1-220ENST00000520260 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
CTNNA1-220ENST00000520260 IQGAP2Q13576 1575 aa9.13□□□□□ -0.95
CTNNA1-220ENST00000520260 CEP170Q5SW79 1584 aa9.13□□□□□ -0.95
CTNNA1-220ENST00000520260 TRHP20396 242 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-220ENST00000520260 PRXQ9BXM0 1461 aa9.13□□□□□ -0.95
CTNNA1-220ENST00000520260 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
CTNNA1-220ENST00000520260 KIF21BO75037 1637 aa9.12□□□□□ -0.95
CTNNA1-220ENST00000520260 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
CTNNA1-220ENST00000520260 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-220ENST00000520260 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 NPM1P06748 294 aaKnown RBP eCLIP9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-220ENST00000520260 TNIKQ9UKE5 1360 aa9.06□□□□□ -0.96
CTNNA1-220ENST00000520260 EFCAB5A4FU69 1503 aa9.05□□□□□ -0.96
CTNNA1-220ENST00000520260 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
CTNNA1-220ENST00000520260 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-220ENST00000520260 CYB5RLQ6IPT4 315 aa9.04□□□□□ -0.96
CTNNA1-220ENST00000520260 PTPRGP23470 1445 aa9.04□□□□□ -0.96
CTNNA1-220ENST00000520260 ARAP1Q96P48 1450 aa9.02□□□□□ -0.96
CTNNA1-220ENST00000520260 NCBP3Q53F19 620 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-220ENST00000520260 KIAA0556O60303 1618 aa9.01□□□□□ -0.97
CTNNA1-220ENST00000520260 FMN1Q68DA7 1419 aa8.98□□□□□ -0.97
CTNNA1-220ENST00000520260 HAX1O00165 279 aa8.97□□□□□ -0.97
CTNNA1-220ENST00000520260 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
CTNNA1-220ENST00000520260 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.97
CTNNA1-220ENST00000520260 DISP1Q96F81 1524 aa8.96□□□□□ -0.97
CTNNA1-220ENST00000520260 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-220ENST00000520260 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
CTNNA1-220ENST00000520260 SAMD9Q5K651 1589 aa8.95□□□□□ -0.98
CTNNA1-220ENST00000520260 TTBK1Q5TCY1 1321 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-220ENST00000520260 ABCC2Q92887 1545 aa8.95□□□□□ -0.98
CTNNA1-220ENST00000520260 CDK11AQ9UQ88 783 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-220ENST00000520260 RANGAP1P46060 587 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-220ENST00000520260 PIP4P2Q8N4L2 257 aa8.93□□□□□ -0.98
CTNNA1-220ENST00000520260 PLB1Q6P1J6 1458 aa8.93□□□□□ -0.98
CTNNA1-220ENST00000520260 ERCC6L2Q5T890 1561 aa8.92□□□□□ -0.98
CTNNA1-220ENST00000520260 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
CTNNA1-220ENST00000520260 CLIP1P30622 1438 aa8.92□□□□□ -0.98
CTNNA1-220ENST00000520260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-220ENST00000520260 APLP2Q06481 763 aa8.91□□□□□ -0.98
CTNNA1-220ENST00000520260 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-220ENST00000520260 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
CTNNA1-220ENST00000520260 HECW1Q76N89 1606 aa8.9□□□□□ -0.99
CTNNA1-220ENST00000520260 RAPGEF6Q8TEU7 1601 aa8.89□□□□□ -0.99
CTNNA1-220ENST00000520260 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
CTNNA1-220ENST00000520260 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
CTNNA1-220ENST00000520260 ADCY10Q96PN6 1610 aa8.88□□□□□ -0.99
CTNNA1-220ENST00000520260 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
CTNNA1-220ENST00000520260 KDM5BQ9UGL1 1544 aa8.88□□□□□ -0.99
CTNNA1-220ENST00000520260 ABCA8O94911 1581 aa8.87□□□□□ -0.99
CTNNA1-220ENST00000520260 PLEKHD1A6NEE1 506 aa8.87□□□□□ -0.99
CTNNA1-220ENST00000520260 EVX2Q03828 476 aa8.87□□□□□ -0.99
CTNNA1-220ENST00000520260 ATP1B4Q9UN42 357 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-220ENST00000520260 CEP162Q5TB80 1403 aa8.87□□□□□ -0.99
CTNNA1-220ENST00000520260 FYCO1Q9BQS8 1478 aa8.86□□□□□ -0.99
CTNNA1-220ENST00000520260 TEX14Q8IWB6 1497 aa8.85□□□□□ -0.99
CTNNA1-220ENST00000520260 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
CTNNA1-220ENST00000520260 WDR7Q9Y4E6 1490 aa8.85□□□□□ -0.99
CTNNA1-220ENST00000520260 ASXL2Q76L83 1435 aa8.85□□□□□ -0.99
CTNNA1-220ENST00000520260 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
CTNNA1-220ENST00000520260 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
CTNNA1-220ENST00000520260 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
CTNNA1-220ENST00000520260 LHX8Q68G74 356 aa8.83□□□□□ -1
CTNNA1-220ENST00000520260 FAM69CQ0P6D2 419 aa8.82□□□□□ -1
CTNNA1-220ENST00000520260 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
CTNNA1-220ENST00000520260 GLI2P10070 1586 aa8.81□□□□□ -1
CTNNA1-220ENST00000520260 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms