RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CYB5RLQ6IPT4 315 aa9.51□□□□□ -0.89
SDCBP-207ENST00000520168 ARAP1Q96P48 1450 aa9.51□□□□□ -0.89
SDCBP-207ENST00000520168 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
SDCBP-207ENST00000520168 TOPBP1Q92547 1522 aa9.47□□□□□ -0.89
SDCBP-207ENST00000520168 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.9
SDCBP-207ENST00000520168 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
SDCBP-207ENST00000520168 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
SDCBP-207ENST00000520168 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
SDCBP-207ENST00000520168 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
SDCBP-207ENST00000520168 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
SDCBP-207ENST00000520168 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
SDCBP-207ENST00000520168 ATF5Q9Y2D1 282 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-207ENST00000520168 AQRO60306 1485 aaKnown RBP eCLIP9.38□□□□□ -0.91
SDCBP-207ENST00000520168 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
SDCBP-207ENST00000520168 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-207ENST00000520168 FBLN2P98095 1184 aa9.35□□□□□ -0.91
SDCBP-207ENST00000520168 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-207ENST00000520168 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
SDCBP-207ENST00000520168 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
SDCBP-207ENST00000520168 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
SDCBP-207ENST00000520168 SYNJ2O15056 1496 aa9.29□□□□□ -0.92
SDCBP-207ENST00000520168 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
SDCBP-207ENST00000520168 SOGA1O94964 1423 aa9.28□□□□□ -0.92
SDCBP-207ENST00000520168 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
SDCBP-207ENST00000520168 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
SDCBP-207ENST00000520168 RAD54L2Q9Y4B4 1467 aa9.27□□□□□ -0.93
SDCBP-207ENST00000520168 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
SDCBP-207ENST00000520168 ZBTB22O15209 634 aa9.25□□□□□ -0.93
SDCBP-207ENST00000520168 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
SDCBP-207ENST00000520168 FGD5Q6ZNL6 1462 aa9.24□□□□□ -0.93
SDCBP-207ENST00000520168 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
SDCBP-207ENST00000520168 REM2Q8IYK8 340 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-207ENST00000520168 ABCA5Q8WWZ7 1642 aa9.2□□□□□ -0.94
SDCBP-207ENST00000520168 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
SDCBP-207ENST00000520168 CEP170Q5SW79 1584 aa9.17□□□□□ -0.94
SDCBP-207ENST00000520168 CUX1P39880 1505 aa9.17□□□□□ -0.94
SDCBP-207ENST00000520168 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
SDCBP-207ENST00000520168 GRIN2AQ12879 1464 aa9.15□□□□□ -0.94
SDCBP-207ENST00000520168 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.94
SDCBP-207ENST00000520168 ERCC6L2Q5T890 1561 aa9.15□□□□□ -0.95
SDCBP-207ENST00000520168 ADAMTS12P58397 1594 aa9.14□□□□□ -0.95
SDCBP-207ENST00000520168 NUP160Q12769 1436 aa9.14□□□□□ -0.95
SDCBP-207ENST00000520168 KDM6BO15054 1643 aa9.13□□□□□ -0.95
SDCBP-207ENST00000520168 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
SDCBP-207ENST00000520168 PITPNM1O00562 1244 aa9.12□□□□□ -0.95
SDCBP-207ENST00000520168 SP7Q8TDD2 431 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-207ENST00000520168 ABCC10Q5T3U5 1492 aa9.1□□□□□ -0.95
SDCBP-207ENST00000520168 DIP2BQ9P265 1576 aa9.1□□□□□ -0.95
SDCBP-207ENST00000520168 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
SDCBP-207ENST00000520168 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
SDCBP-207ENST00000520168 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
SDCBP-207ENST00000520168 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
SDCBP-207ENST00000520168 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
SDCBP-207ENST00000520168 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
SDCBP-207ENST00000520168 FHAD1B1AJZ9 1412 aa9.06□□□□□ -0.96
SDCBP-207ENST00000520168 TSPOAP1O95153 1857 aa9.06□□□□□ -0.96
SDCBP-207ENST00000520168 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
SDCBP-207ENST00000520168 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
SDCBP-207ENST00000520168 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
SDCBP-207ENST00000520168 PRG4Q92954 1404 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-207ENST00000520168 ADCY10Q96PN6 1610 aa9.03□□□□□ -0.96
SDCBP-207ENST00000520168 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
SDCBP-207ENST00000520168 RUSC2Q8N2Y8 1516 aa9.03□□□□□ -0.96
SDCBP-207ENST00000520168 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
SDCBP-207ENST00000520168 HAX1O00165 279 aa9.02□□□□□ -0.97
SDCBP-207ENST00000520168 TOP2BQ02880 1626 aa9.01□□□□□ -0.97
SDCBP-207ENST00000520168 HECW2Q9P2P5 1572 aa8.98□□□□□ -0.97
SDCBP-207ENST00000520168 MKRN4PQ13434 485 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-207ENST00000520168 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
SDCBP-207ENST00000520168 ADGRL1O94910 1474 aa8.96□□□□□ -0.97
SDCBP-207ENST00000520168 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-207ENST00000520168 GLI2P10070 1586 aa8.95□□□□□ -0.98
SDCBP-207ENST00000520168 PPRC1Q5VV67 1664 aaKnown RBP8.95□□□□□ -0.98
SDCBP-207ENST00000520168 ZNF692Q9BU19 519 aaPredicted RBP8.94□□□□□ -0.98
SDCBP-207ENST00000520168 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
SDCBP-207ENST00000520168 CLEC11AQ9Y240 323 aa8.92□□□□□ -0.98
SDCBP-207ENST00000520168 CUL7Q14999 1698 aa8.91□□□□□ -0.98
SDCBP-207ENST00000520168 KIAA0586Q9BVV6 1533 aa8.91□□□□□ -0.98
SDCBP-207ENST00000520168 PLB1Q6P1J6 1458 aa8.91□□□□□ -0.98
SDCBP-207ENST00000520168 TEX14Q8IWB6 1497 aa8.9□□□□□ -0.98
SDCBP-207ENST00000520168 MAP3K4Q9Y6R4 1608 aa8.9□□□□□ -0.99
SDCBP-207ENST00000520168 ABCC2Q92887 1545 aa8.9□□□□□ -0.99
SDCBP-207ENST00000520168 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
SDCBP-207ENST00000520168 EVX2Q03828 476 aa8.86□□□□□ -0.99
SDCBP-207ENST00000520168 FBXO41Q8TF61 875 aa8.86□□□□□ -0.99
SDCBP-207ENST00000520168 ASXL2Q76L83 1435 aa8.86□□□□□ -0.99
SDCBP-207ENST00000520168 UHRF1BP1LA0JNW5 1464 aa8.85□□□□□ -0.99
SDCBP-207ENST00000520168 PTPRGP23470 1445 aa8.85□□□□□ -0.99
SDCBP-207ENST00000520168 CARMIL2Q6F5E8 1435 aa8.85□□□□□ -0.99
SDCBP-207ENST00000520168 EPRSP07814 1512 aaKnown RBP8.83□□□□□ -1
SDCBP-207ENST00000520168 TNIKQ9UKE5 1360 aa8.83□□□□□ -1
SDCBP-207ENST00000520168 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
SDCBP-207ENST00000520168 IQGAP2Q13576 1575 aa8.82□□□□□ -1
SDCBP-207ENST00000520168 ZCCHC11Q5TAX3 1644 aaKnown RBP8.81□□□□□ -1
SDCBP-207ENST00000520168 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
SDCBP-207ENST00000520168 C19orf67A6NJJ6 358 aa8.8□□□□□ -1
SDCBP-207ENST00000520168 COL17A1Q9UMD9 1497 aaPredicted RBP8.8□□□□□ -1
SDCBP-207ENST00000520168 UACAQ9BZF9 1416 aa8.8□□□□□ -1
SDCBP-207ENST00000520168 PRR29P0C7W0 189 aa8.78□□□□□ -1
SDCBP-207ENST00000520168 KIF21BO75037 1637 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms