RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 IGF1RP08069 1367 aa17.66■□□□□ 0.42
FAM49B-215ENST00000519824 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
FAM49B-215ENST00000519824 KCNH8Q96L42 1107 aa17.64■□□□□ 0.42
FAM49B-215ENST00000519824 NEFLP07196 543 aa17.63■□□□□ 0.41
FAM49B-215ENST00000519824 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
FAM49B-215ENST00000519824 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
FAM49B-215ENST00000519824 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
FAM49B-215ENST00000519824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
FAM49B-215ENST00000519824 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
FAM49B-215ENST00000519824 ANP32CO43423 234 aa17.59■□□□□ 0.41
FAM49B-215ENST00000519824 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
FAM49B-215ENST00000519824 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
FAM49B-215ENST00000519824 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
FAM49B-215ENST00000519824 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
FAM49B-215ENST00000519824 CUX1P39880 1505 aa17.57■□□□□ 0.4
FAM49B-215ENST00000519824 KIF21BO75037 1637 aa17.57■□□□□ 0.4
FAM49B-215ENST00000519824 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
FAM49B-215ENST00000519824 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
FAM49B-215ENST00000519824 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
FAM49B-215ENST00000519824 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
FAM49B-215ENST00000519824 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
FAM49B-215ENST00000519824 CFTRP13569 1480 aa17.48■□□□□ 0.39
FAM49B-215ENST00000519824 FKBP8Q14318 412 aa17.47■□□□□ 0.39
FAM49B-215ENST00000519824 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
FAM49B-215ENST00000519824 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
FAM49B-215ENST00000519824 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
FAM49B-215ENST00000519824 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
FAM49B-215ENST00000519824 HNRNPUQ00839 825 aaKnown RBP eCLIP17.44■□□□□ 0.38
FAM49B-215ENST00000519824 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
FAM49B-215ENST00000519824 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.389e-8■■■■■ 31.5
FAM49B-215ENST00000519824 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
FAM49B-215ENST00000519824 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
FAM49B-215ENST00000519824 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
FAM49B-215ENST00000519824 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
FAM49B-215ENST00000519824 SETD5Q9C0A6 1442 aa17.39■□□□□ 0.38
FAM49B-215ENST00000519824 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.37
FAM49B-215ENST00000519824 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
FAM49B-215ENST00000519824 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
FAM49B-215ENST00000519824 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.37
FAM49B-215ENST00000519824 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
FAM49B-215ENST00000519824 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
FAM49B-215ENST00000519824 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
FAM49B-215ENST00000519824 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-215ENST00000519824 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
FAM49B-215ENST00000519824 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
FAM49B-215ENST00000519824 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
FAM49B-215ENST00000519824 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
FAM49B-215ENST00000519824 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
FAM49B-215ENST00000519824 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
FAM49B-215ENST00000519824 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
FAM49B-215ENST00000519824 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.35
FAM49B-215ENST00000519824 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
FAM49B-215ENST00000519824 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
FAM49B-215ENST00000519824 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
FAM49B-215ENST00000519824 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
FAM49B-215ENST00000519824 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
FAM49B-215ENST00000519824 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
FAM49B-215ENST00000519824 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
FAM49B-215ENST00000519824 PKD2Q13563 968 aa17.19■□□□□ 0.34
FAM49B-215ENST00000519824 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
FAM49B-215ENST00000519824 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
FAM49B-215ENST00000519824 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
FAM49B-215ENST00000519824 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
FAM49B-215ENST00000519824 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
FAM49B-215ENST00000519824 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
FAM49B-215ENST00000519824 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.33
FAM49B-215ENST00000519824 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.33
FAM49B-215ENST00000519824 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.33
FAM49B-215ENST00000519824 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
FAM49B-215ENST00000519824 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
FAM49B-215ENST00000519824 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
FAM49B-215ENST00000519824 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-215ENST00000519824 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
FAM49B-215ENST00000519824 NUP155O75694 1391 aa17.03■□□□□ 0.32
FAM49B-215ENST00000519824 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
FAM49B-215ENST00000519824 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
FAM49B-215ENST00000519824 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
FAM49B-215ENST00000519824 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
FAM49B-215ENST00000519824 TIAM1Q13009 1591 aa17■□□□□ 0.31
FAM49B-215ENST00000519824 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
FAM49B-215ENST00000519824 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
FAM49B-215ENST00000519824 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
FAM49B-215ENST00000519824 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
FAM49B-215ENST00000519824 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
FAM49B-215ENST00000519824 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
FAM49B-215ENST00000519824 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
FAM49B-215ENST00000519824 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
FAM49B-215ENST00000519824 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
FAM49B-215ENST00000519824 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
FAM49B-215ENST00000519824 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
FAM49B-215ENST00000519824 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
FAM49B-215ENST00000519824 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
FAM49B-215ENST00000519824 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
FAM49B-215ENST00000519824 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
FAM49B-215ENST00000519824 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
FAM49B-215ENST00000519824 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
FAM49B-215ENST00000519824 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
FAM49B-215ENST00000519824 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
FAM49B-215ENST00000519824 C11orf95C9JLR9 678 aaPredicted RBP16.9■□□□□ 0.3
FAM49B-215ENST00000519824 GGT6Q6P531 493 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms