RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 CSRNP3Q8WYN3 585 aa23.92■■□□□ 1.42
BRD9-215ENST00000518250 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
BRD9-215ENST00000518250 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
BRD9-215ENST00000518250 KIAA0586Q9BVV6 1533 aa23.84■■□□□ 1.41
BRD9-215ENST00000518250 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
BRD9-215ENST00000518250 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
BRD9-215ENST00000518250 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
BRD9-215ENST00000518250 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
BRD9-215ENST00000518250 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
BRD9-215ENST00000518250 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
BRD9-215ENST00000518250 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
BRD9-215ENST00000518250 KIF21BO75037 1637 aa23.73■■□□□ 1.39
BRD9-215ENST00000518250 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
BRD9-215ENST00000518250 UGGT2Q9NYU1 1516 aa23.62■■□□□ 1.37
BRD9-215ENST00000518250 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
BRD9-215ENST00000518250 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
BRD9-215ENST00000518250 DISP1Q96F81 1524 aa23.57■■□□□ 1.36
BRD9-215ENST00000518250 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
BRD9-215ENST00000518250 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
BRD9-215ENST00000518250 UBTFP17480 764 aaKnown RBP23.55■■□□□ 1.36
BRD9-215ENST00000518250 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
BRD9-215ENST00000518250 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
BRD9-215ENST00000518250 PTPRGP23470 1445 aa23.49■■□□□ 1.35
BRD9-215ENST00000518250 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
BRD9-215ENST00000518250 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
BRD9-215ENST00000518250 ADCY10Q96PN6 1610 aa23.41■■□□□ 1.34
BRD9-215ENST00000518250 EFCAB5A4FU69 1503 aa23.35■■□□□ 1.33
BRD9-215ENST00000518250 UACAQ9BZF9 1416 aa23.33■■□□□ 1.33
BRD9-215ENST00000518250 FHOD3Q2V2M9 1422 aa23.32■■□□□ 1.32
BRD9-215ENST00000518250 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
BRD9-215ENST00000518250 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
BRD9-215ENST00000518250 UHRF1BP1LA0JNW5 1464 aa23.29■■□□□ 1.32
BRD9-215ENST00000518250 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
BRD9-215ENST00000518250 ABCA8O94911 1581 aa23.27■■□□□ 1.32
BRD9-215ENST00000518250 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
BRD9-215ENST00000518250 LOC105371045A0A1W2PR82 267 aa23.24■■□□□ 1.31
BRD9-215ENST00000518250 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
BRD9-215ENST00000518250 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
BRD9-215ENST00000518250 ZCCHC11Q5TAX3 1644 aaKnown RBP23.2■■□□□ 1.3
BRD9-215ENST00000518250 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
BRD9-215ENST00000518250 KDM5BQ9UGL1 1544 aa23.18■■□□□ 1.3
BRD9-215ENST00000518250 CLIP1P30622 1438 aa23.17■■□□□ 1.3
BRD9-215ENST00000518250 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
BRD9-215ENST00000518250 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
BRD9-215ENST00000518250 FMN1Q68DA7 1419 aa23.12■■□□□ 1.29
BRD9-215ENST00000518250 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
BRD9-215ENST00000518250 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
BRD9-215ENST00000518250 NUP153P49790 1475 aaKnown RBP23.08■■□□□ 1.29
BRD9-215ENST00000518250 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
BRD9-215ENST00000518250 ATP10BO94823 1461 aa23.06■■□□□ 1.28
BRD9-215ENST00000518250 ABCC10Q5T3U5 1492 aa23.06■■□□□ 1.28
BRD9-215ENST00000518250 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
BRD9-215ENST00000518250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
BRD9-215ENST00000518250 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
BRD9-215ENST00000518250 FAM69CQ0P6D2 419 aa23.04■■□□□ 1.28
BRD9-215ENST00000518250 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
BRD9-215ENST00000518250 WDR7Q9Y4E6 1490 aa23.01■■□□□ 1.27
BRD9-215ENST00000518250 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
BRD9-215ENST00000518250 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
BRD9-215ENST00000518250 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
BRD9-215ENST00000518250 LRRIQ1Q96JM4 1722 aa22.97■■□□□ 1.27
BRD9-215ENST00000518250 EPRSP07814 1512 aaKnown RBP22.97■■□□□ 1.27
BRD9-215ENST00000518250 KCNH8Q96L42 1107 aa22.96■■□□□ 1.27
BRD9-215ENST00000518250 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
BRD9-215ENST00000518250 GLI2P10070 1586 aa22.94■■□□□ 1.26
BRD9-215ENST00000518250 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
BRD9-215ENST00000518250 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
BRD9-215ENST00000518250 MAP3K4Q9Y6R4 1608 aa22.87■■□□□ 1.25
BRD9-215ENST00000518250 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
BRD9-215ENST00000518250 CFAP43Q8NDM7 1665 aa22.85■■□□□ 1.25
BRD9-215ENST00000518250 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
BRD9-215ENST00000518250 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
BRD9-215ENST00000518250 VPS8Q8N3P4 1428 aa22.81■■□□□ 1.24
BRD9-215ENST00000518250 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
BRD9-215ENST00000518250 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
BRD9-215ENST00000518250 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
BRD9-215ENST00000518250 KIF14Q15058 1648 aa22.74■■□□□ 1.23
BRD9-215ENST00000518250 TEX14Q8IWB6 1497 aa22.73■■□□□ 1.23
BRD9-215ENST00000518250 MAGI3Q5TCQ9 1506 aa22.73■■□□□ 1.23
BRD9-215ENST00000518250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.73■■□□□ 1.23
BRD9-215ENST00000518250 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
BRD9-215ENST00000518250 KDM6BO15054 1643 aa22.68■■□□□ 1.22
BRD9-215ENST00000518250 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
BRD9-215ENST00000518250 MYO5CQ9NQX4 1742 aa22.66■■□□□ 1.22
BRD9-215ENST00000518250 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
BRD9-215ENST00000518250 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
BRD9-215ENST00000518250 APLP2Q06481 763 aa22.59■■□□□ 1.21
BRD9-215ENST00000518250 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
BRD9-215ENST00000518250 PLCH2O75038 1416 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 FANCAO15360 1455 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 NEO1Q92859 1461 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 CDC42BPBQ9Y5S2 1711 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
BRD9-215ENST00000518250 COL17A1Q9UMD9 1497 aaPredicted RBP22.55■■□□□ 1.2
BRD9-215ENST00000518250 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
BRD9-215ENST00000518250 PREX2Q70Z35 1606 aa22.55■■□□□ 1.2
BRD9-215ENST00000518250 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
BRD9-215ENST00000518250 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
BRD9-215ENST00000518250 ARAP3Q8WWN8 1544 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms