RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
PABPC1-205ENST00000518196 FBLN2P98095 1184 aa21.49■■□□□ 1.03
PABPC1-205ENST00000518196 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
PABPC1-205ENST00000518196 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
PABPC1-205ENST00000518196 CUL7Q14999 1698 aa21.49■■□□□ 1.03
PABPC1-205ENST00000518196 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
PABPC1-205ENST00000518196 CSRNP3Q8WYN3 585 aa21.48■■□□□ 1.03
PABPC1-205ENST00000518196 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
PABPC1-205ENST00000518196 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
PABPC1-205ENST00000518196 CHD1O14646 1710 aa21.43■■□□□ 1.02
PABPC1-205ENST00000518196 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
PABPC1-205ENST00000518196 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
PABPC1-205ENST00000518196 RAPGEF2Q9Y4G8 1499 aa21.37■■□□□ 1.01
PABPC1-205ENST00000518196 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
PABPC1-205ENST00000518196 HOXD11P31277 338 aaPredicted RBP21.31■■□□□ 1
PABPC1-205ENST00000518196 KIF21BO75037 1637 aa21.27■■□□□ 1
PABPC1-205ENST00000518196 NUP160Q12769 1436 aa21.25■□□□□ 0.99
PABPC1-205ENST00000518196 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
PABPC1-205ENST00000518196 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
PABPC1-205ENST00000518196 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
PABPC1-205ENST00000518196 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
PABPC1-205ENST00000518196 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
PABPC1-205ENST00000518196 CTTNBP2Q8WZ74 1663 aa21.15■□□□□ 0.98
PABPC1-205ENST00000518196 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
PABPC1-205ENST00000518196 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
PABPC1-205ENST00000518196 DNAJC5Q9H3Z4 198 aa21.06■□□□□ 0.96
PABPC1-205ENST00000518196 SHROOM2Q13796 1616 aa21.05■□□□□ 0.96
PABPC1-205ENST00000518196 LOC105371045A0A1W2PR82 267 aa21.02■□□□□ 0.96
PABPC1-205ENST00000518196 ZBTB22O15209 634 aa21.01■□□□□ 0.95
PABPC1-205ENST00000518196 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
PABPC1-205ENST00000518196 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
PABPC1-205ENST00000518196 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
PABPC1-205ENST00000518196 CARMIL2Q6F5E8 1435 aa20.96■□□□□ 0.95
PABPC1-205ENST00000518196 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
PABPC1-205ENST00000518196 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
PABPC1-205ENST00000518196 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
PABPC1-205ENST00000518196 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
PABPC1-205ENST00000518196 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
PABPC1-205ENST00000518196 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
PABPC1-205ENST00000518196 DISP1Q96F81 1524 aa20.89■□□□□ 0.94
PABPC1-205ENST00000518196 KIAA0556O60303 1618 aa20.89■□□□□ 0.93
PABPC1-205ENST00000518196 SAMD9Q5K651 1589 aa20.86■□□□□ 0.93
PABPC1-205ENST00000518196 EFCAB5A4FU69 1503 aa20.86■□□□□ 0.93
PABPC1-205ENST00000518196 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
PABPC1-205ENST00000518196 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
PABPC1-205ENST00000518196 FOXD4L1Q9NU39 408 aa20.83■□□□□ 0.93
PABPC1-205ENST00000518196 PTPRGP23470 1445 aa20.82■□□□□ 0.92
PABPC1-205ENST00000518196 CLIP1P30622 1438 aa20.82■□□□□ 0.92
PABPC1-205ENST00000518196 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
PABPC1-205ENST00000518196 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
PABPC1-205ENST00000518196 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
PABPC1-205ENST00000518196 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
PABPC1-205ENST00000518196 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
PABPC1-205ENST00000518196 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.91
PABPC1-205ENST00000518196 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
PABPC1-205ENST00000518196 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
PABPC1-205ENST00000518196 UACAQ9BZF9 1416 aa20.68■□□□□ 0.9
PABPC1-205ENST00000518196 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
PABPC1-205ENST00000518196 ABCA8O94911 1581 aa20.63■□□□□ 0.89
PABPC1-205ENST00000518196 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
PABPC1-205ENST00000518196 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
PABPC1-205ENST00000518196 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
PABPC1-205ENST00000518196 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
PABPC1-205ENST00000518196 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
PABPC1-205ENST00000518196 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
PABPC1-205ENST00000518196 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
PABPC1-205ENST00000518196 HECW1Q76N89 1606 aa20.53■□□□□ 0.88
PABPC1-205ENST00000518196 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
PABPC1-205ENST00000518196 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
PABPC1-205ENST00000518196 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
PABPC1-205ENST00000518196 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
PABPC1-205ENST00000518196 KDM5BQ9UGL1 1544 aa20.51■□□□□ 0.87
PABPC1-205ENST00000518196 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
PABPC1-205ENST00000518196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-205ENST00000518196 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
PABPC1-205ENST00000518196 ZCCHC11Q5TAX3 1644 aaKnown RBP20.48■□□□□ 0.87
PABPC1-205ENST00000518196 ATP10BO94823 1461 aa20.48■□□□□ 0.87
PABPC1-205ENST00000518196 EPRSP07814 1512 aaKnown RBP20.45■□□□□ 0.86
PABPC1-205ENST00000518196 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
PABPC1-205ENST00000518196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
PABPC1-205ENST00000518196 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
PABPC1-205ENST00000518196 MAPKBP1O60336 1514 aa20.41■□□□□ 0.86
PABPC1-205ENST00000518196 CDK13Q14004 1512 aaKnown RBP20.41■□□□□ 0.86
PABPC1-205ENST00000518196 LRRIQ1Q96JM4 1722 aa20.41■□□□□ 0.86
PABPC1-205ENST00000518196 PLEKHD1A6NEE1 506 aa20.4■□□□□ 0.86
PABPC1-205ENST00000518196 APLP2Q06481 763 aa20.4■□□□□ 0.86
PABPC1-205ENST00000518196 ASXL2Q76L83 1435 aa20.39■□□□□ 0.85
PABPC1-205ENST00000518196 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
PABPC1-205ENST00000518196 MYCNP04198 464 aaPredicted RBP20.32■□□□□ 0.84
PABPC1-205ENST00000518196 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
PABPC1-205ENST00000518196 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
PABPC1-205ENST00000518196 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
PABPC1-205ENST00000518196 TIAM1Q13009 1591 aa20.3■□□□□ 0.84
PABPC1-205ENST00000518196 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
PABPC1-205ENST00000518196 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
PABPC1-205ENST00000518196 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
PABPC1-205ENST00000518196 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
PABPC1-205ENST00000518196 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
PABPC1-205ENST00000518196 DIP2BQ9P265 1576 aa20.24■□□□□ 0.83
PABPC1-205ENST00000518196 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms