RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
ARFGEF1-202ENST00000517955 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
ARFGEF1-202ENST00000517955 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
ARFGEF1-202ENST00000517955 KIF21BO75037 1637 aa18.81■□□□□ 0.6
ARFGEF1-202ENST00000517955 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
ARFGEF1-202ENST00000517955 GRIN2AQ12879 1464 aa18.74■□□□□ 0.59
ARFGEF1-202ENST00000517955 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
ARFGEF1-202ENST00000517955 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
ARFGEF1-202ENST00000517955 CHD1O14646 1710 aa18.69■□□□□ 0.58
ARFGEF1-202ENST00000517955 NUP160Q12769 1436 aa18.67■□□□□ 0.58
ARFGEF1-202ENST00000517955 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
ARFGEF1-202ENST00000517955 FBLN2P98095 1184 aa18.65■□□□□ 0.58
ARFGEF1-202ENST00000517955 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
ARFGEF1-202ENST00000517955 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
ARFGEF1-202ENST00000517955 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
ARFGEF1-202ENST00000517955 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
ARFGEF1-202ENST00000517955 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
ARFGEF1-202ENST00000517955 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
ARFGEF1-202ENST00000517955 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
ARFGEF1-202ENST00000517955 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
ARFGEF1-202ENST00000517955 IQGAP2Q13576 1575 aa18.52■□□□□ 0.56
ARFGEF1-202ENST00000517955 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
ARFGEF1-202ENST00000517955 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
ARFGEF1-202ENST00000517955 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
ARFGEF1-202ENST00000517955 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
ARFGEF1-202ENST00000517955 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
ARFGEF1-202ENST00000517955 HOXD11P31277 338 aaPredicted RBP18.43■□□□□ 0.54
ARFGEF1-202ENST00000517955 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
ARFGEF1-202ENST00000517955 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
ARFGEF1-202ENST00000517955 SAMD9Q5K651 1589 aa18.39■□□□□ 0.53
ARFGEF1-202ENST00000517955 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
ARFGEF1-202ENST00000517955 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
ARFGEF1-202ENST00000517955 CLIP1P30622 1438 aa18.37■□□□□ 0.53
ARFGEF1-202ENST00000517955 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
ARFGEF1-202ENST00000517955 PRG4Q92954 1404 aaPredicted RBP18.36■□□□□ 0.53
ARFGEF1-202ENST00000517955 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
ARFGEF1-202ENST00000517955 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
ARFGEF1-202ENST00000517955 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.52
ARFGEF1-202ENST00000517955 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
ARFGEF1-202ENST00000517955 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
ARFGEF1-202ENST00000517955 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
ARFGEF1-202ENST00000517955 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
ARFGEF1-202ENST00000517955 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
ARFGEF1-202ENST00000517955 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
ARFGEF1-202ENST00000517955 PTPRGP23470 1445 aa18.22■□□□□ 0.51
ARFGEF1-202ENST00000517955 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
ARFGEF1-202ENST00000517955 KCNA4P22459 653 aa18.21■□□□□ 0.51
ARFGEF1-202ENST00000517955 RIMBP3CA6NJZ7 1639 aa18.19■□□□□ 0.5
ARFGEF1-202ENST00000517955 RIMBP3BA6NNM3 1639 aa18.19■□□□□ 0.5
ARFGEF1-202ENST00000517955 RIMBP3Q9UFD9 1639 aa18.19■□□□□ 0.5
ARFGEF1-202ENST00000517955 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
ARFGEF1-202ENST00000517955 ABCA8O94911 1581 aa18.14■□□□□ 0.49
ARFGEF1-202ENST00000517955 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
ARFGEF1-202ENST00000517955 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
ARFGEF1-202ENST00000517955 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
ARFGEF1-202ENST00000517955 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
ARFGEF1-202ENST00000517955 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
ARFGEF1-202ENST00000517955 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
ARFGEF1-202ENST00000517955 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
ARFGEF1-202ENST00000517955 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
ARFGEF1-202ENST00000517955 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
ARFGEF1-202ENST00000517955 NUP153P49790 1475 aaKnown RBP18.05■□□□□ 0.48
ARFGEF1-202ENST00000517955 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
ARFGEF1-202ENST00000517955 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
ARFGEF1-202ENST00000517955 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
ARFGEF1-202ENST00000517955 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
ARFGEF1-202ENST00000517955 ADCY10Q96PN6 1610 aa18.02■□□□□ 0.48
ARFGEF1-202ENST00000517955 KDM5BQ9UGL1 1544 aa18.02■□□□□ 0.47
ARFGEF1-202ENST00000517955 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
ARFGEF1-202ENST00000517955 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
ARFGEF1-202ENST00000517955 ATP10BO94823 1461 aa17.99■□□□□ 0.47
ARFGEF1-202ENST00000517955 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
ARFGEF1-202ENST00000517955 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
ARFGEF1-202ENST00000517955 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
ARFGEF1-202ENST00000517955 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
ARFGEF1-202ENST00000517955 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
ARFGEF1-202ENST00000517955 APLP2Q06481 763 aa17.92■□□□□ 0.46
ARFGEF1-202ENST00000517955 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
ARFGEF1-202ENST00000517955 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
ARFGEF1-202ENST00000517955 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
ARFGEF1-202ENST00000517955 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
ARFGEF1-202ENST00000517955 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
ARFGEF1-202ENST00000517955 PLEKHD1A6NEE1 506 aa17.86■□□□□ 0.45
ARFGEF1-202ENST00000517955 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
ARFGEF1-202ENST00000517955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
ARFGEF1-202ENST00000517955 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
ARFGEF1-202ENST00000517955 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
ARFGEF1-202ENST00000517955 ASXL2Q76L83 1435 aa17.83■□□□□ 0.45
ARFGEF1-202ENST00000517955 ARID3CA6NKF2 412 aa17.83■□□□□ 0.44
ARFGEF1-202ENST00000517955 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
ARFGEF1-202ENST00000517955 WDR7Q9Y4E6 1490 aa17.82■□□□□ 0.44
ARFGEF1-202ENST00000517955 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
ARFGEF1-202ENST00000517955 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
ARFGEF1-202ENST00000517955 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
ARFGEF1-202ENST00000517955 KIF14Q15058 1648 aa17.74■□□□□ 0.43
ARFGEF1-202ENST00000517955 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
ARFGEF1-202ENST00000517955 GLI2P10070 1586 aa17.73■□□□□ 0.43
ARFGEF1-202ENST00000517955 NCOA2Q15596 1464 aa17.71■□□□□ 0.43
ARFGEF1-202ENST00000517955 ABCA9Q8IUA7 1624 aa17.7■□□□□ 0.42
ARFGEF1-202ENST00000517955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 466.6 ms