RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
CPEB4-203ENST00000517880 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
CPEB4-203ENST00000517880 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
CPEB4-203ENST00000517880 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
CPEB4-203ENST00000517880 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
CPEB4-203ENST00000517880 WDR62O43379 1518 aa16.54■□□□□ 0.24
CPEB4-203ENST00000517880 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
CPEB4-203ENST00000517880 ARHGAP35Q9NRY4 1499 aa16.51■□□□□ 0.23
CPEB4-203ENST00000517880 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
CPEB4-203ENST00000517880 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
CPEB4-203ENST00000517880 ZEB1P37275 1124 aaPredicted RBP16.49■□□□□ 0.23
CPEB4-203ENST00000517880 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
CPEB4-203ENST00000517880 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
CPEB4-203ENST00000517880 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
CPEB4-203ENST00000517880 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
CPEB4-203ENST00000517880 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
CPEB4-203ENST00000517880 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
CPEB4-203ENST00000517880 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
CPEB4-203ENST00000517880 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
CPEB4-203ENST00000517880 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.213e-6■■■■■ 29.7
CPEB4-203ENST00000517880 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
CPEB4-203ENST00000517880 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
CPEB4-203ENST00000517880 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
CPEB4-203ENST00000517880 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
CPEB4-203ENST00000517880 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
CPEB4-203ENST00000517880 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
CPEB4-203ENST00000517880 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
CPEB4-203ENST00000517880 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
CPEB4-203ENST00000517880 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
CPEB4-203ENST00000517880 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.19
CPEB4-203ENST00000517880 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
CPEB4-203ENST00000517880 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
CPEB4-203ENST00000517880 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
CPEB4-203ENST00000517880 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
CPEB4-203ENST00000517880 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
CPEB4-203ENST00000517880 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
CPEB4-203ENST00000517880 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
CPEB4-203ENST00000517880 CFAP43Q8NDM7 1665 aa16.22■□□□□ 0.19
CPEB4-203ENST00000517880 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
CPEB4-203ENST00000517880 KIAA0586Q9BVV6 1533 aa16.22■□□□□ 0.19
CPEB4-203ENST00000517880 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
CPEB4-203ENST00000517880 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
CPEB4-203ENST00000517880 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
CPEB4-203ENST00000517880 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
CPEB4-203ENST00000517880 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
CPEB4-203ENST00000517880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
CPEB4-203ENST00000517880 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
CPEB4-203ENST00000517880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
CPEB4-203ENST00000517880 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
CPEB4-203ENST00000517880 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
CPEB4-203ENST00000517880 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
CPEB4-203ENST00000517880 POTEHQ6S545 545 aa16.1■□□□□ 0.17
CPEB4-203ENST00000517880 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
CPEB4-203ENST00000517880 NUP160Q12769 1436 aa16.08■□□□□ 0.17
CPEB4-203ENST00000517880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
CPEB4-203ENST00000517880 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
CPEB4-203ENST00000517880 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
CPEB4-203ENST00000517880 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
CPEB4-203ENST00000517880 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
CPEB4-203ENST00000517880 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
CPEB4-203ENST00000517880 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
CPEB4-203ENST00000517880 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
CPEB4-203ENST00000517880 FBLN2P98095 1184 aa16.02■□□□□ 0.16
CPEB4-203ENST00000517880 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.16
CPEB4-203ENST00000517880 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
CPEB4-203ENST00000517880 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.15
CPEB4-203ENST00000517880 JPH4Q96JJ6 628 aa16■□□□□ 0.15
CPEB4-203ENST00000517880 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
CPEB4-203ENST00000517880 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
CPEB4-203ENST00000517880 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
CPEB4-203ENST00000517880 NCOA2Q15596 1464 aa15.95■□□□□ 0.14
CPEB4-203ENST00000517880 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
CPEB4-203ENST00000517880 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
CPEB4-203ENST00000517880 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
CPEB4-203ENST00000517880 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
CPEB4-203ENST00000517880 FAM50AQ14320 339 aaKnown RBP15.94■□□□□ 0.14
CPEB4-203ENST00000517880 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
CPEB4-203ENST00000517880 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
CPEB4-203ENST00000517880 ITGAEP38570 1179 aa15.89■□□□□ 0.13
CPEB4-203ENST00000517880 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
CPEB4-203ENST00000517880 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
CPEB4-203ENST00000517880 MIA2Q96PC5 1412 aa15.88■□□□□ 0.13
CPEB4-203ENST00000517880 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
CPEB4-203ENST00000517880 CHD1O14646 1710 aa15.87■□□□□ 0.13
CPEB4-203ENST00000517880 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
CPEB4-203ENST00000517880 RAB3GAP2Q9H2M9 1393 aa15.85■□□□□ 0.13
CPEB4-203ENST00000517880 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
CPEB4-203ENST00000517880 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
CPEB4-203ENST00000517880 ABCA8O94911 1581 aa15.83■□□□□ 0.13
CPEB4-203ENST00000517880 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
CPEB4-203ENST00000517880 TROQ12816 1431 aaPredicted RBP15.81■□□□□ 0.12
CPEB4-203ENST00000517880 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
CPEB4-203ENST00000517880 ACIN1Q9UKV3 1341 aaKnown RBP15.81■□□□□ 0.12
CPEB4-203ENST00000517880 PTPRGP23470 1445 aa15.8■□□□□ 0.12
CPEB4-203ENST00000517880 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
CPEB4-203ENST00000517880 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.11
CPEB4-203ENST00000517880 PLEKHD1A6NEE1 506 aa15.77■□□□□ 0.11
CPEB4-203ENST00000517880 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
CPEB4-203ENST00000517880 ATP10BO94823 1461 aa15.74■□□□□ 0.11
CPEB4-203ENST00000517880 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms