RNA–Protein interactions for RNA: ENST00000515820.6

NKX6-1-202, Transcript of NK6 homeobox 1, humanhuman

TSL 3 BASIC

Gene NKX6-1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-202ENST00000515820 YTHDC1Q96MU7 727 aaKnown RBP30.65■■■□□ 2.5
NKX6-1-202ENST00000515820 POLA1P09884 1462 aaPredicted RBP30.61■■■□□ 2.49
NKX6-1-202ENST00000515820 CCNB3Q8WWL7 1395 aa30.57■■■□□ 2.48
NKX6-1-202ENST00000515820 MRC2Q9UBG0 1479 aa30.56■■■□□ 2.48
NKX6-1-202ENST00000515820 MAP3K1Q13233 1512 aa30.53■■■□□ 2.48
NKX6-1-202ENST00000515820 IGF1RP08069 1367 aa30.5■■■□□ 2.47
NKX6-1-202ENST00000515820 TIAM1Q13009 1591 aa30.41■■■□□ 2.46
NKX6-1-202ENST00000515820 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
NKX6-1-202ENST00000515820 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
NKX6-1-202ENST00000515820 WDR62O43379 1518 aa30.37■■■□□ 2.45
NKX6-1-202ENST00000515820 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
NKX6-1-202ENST00000515820 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
NKX6-1-202ENST00000515820 LRRC9Q6ZRR7 1453 aa30.29■■■□□ 2.44
NKX6-1-202ENST00000515820 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
NKX6-1-202ENST00000515820 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
NKX6-1-202ENST00000515820 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
NKX6-1-202ENST00000515820 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
NKX6-1-202ENST00000515820 ZNF608Q9ULD9 1512 aaPredicted RBP30.24■■■□□ 2.43
NKX6-1-202ENST00000515820 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.43
NKX6-1-202ENST00000515820 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
NKX6-1-202ENST00000515820 CFAP43Q8NDM7 1665 aa30.21■■■□□ 2.43
NKX6-1-202ENST00000515820 SETD5Q9C0A6 1442 aa30.2■■■□□ 2.43
NKX6-1-202ENST00000515820 ITGAEP38570 1179 aa30.18■■■□□ 2.42
NKX6-1-202ENST00000515820 PHLDB1Q86UU1 1377 aa30.16■■■□□ 2.42
NKX6-1-202ENST00000515820 MYT1Q01538 1121 aa30.14■■■□□ 2.41
NKX6-1-202ENST00000515820 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
NKX6-1-202ENST00000515820 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
NKX6-1-202ENST00000515820 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
NKX6-1-202ENST00000515820 ABCA5Q8WWZ7 1642 aa30.09■■■□□ 2.41
NKX6-1-202ENST00000515820 EFCAB5A4FU69 1503 aa30.07■■■□□ 2.4
NKX6-1-202ENST00000515820 FYCO1Q9BQS8 1478 aa30.05■■■□□ 2.4
NKX6-1-202ENST00000515820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
NKX6-1-202ENST00000515820 TIMELESSQ9UNS1 1208 aa30■■■□□ 2.39
NKX6-1-202ENST00000515820 CASKIN1Q8WXD9 1431 aa29.99■■■□□ 2.39
NKX6-1-202ENST00000515820 CUL7Q14999 1698 aa29.99■■■□□ 2.39
NKX6-1-202ENST00000515820 EIF4G3O43432 1585 aaKnown RBP29.97■■■□□ 2.39
NKX6-1-202ENST00000515820 FAM50AQ14320 339 aaKnown RBP29.96■■■□□ 2.39
NKX6-1-202ENST00000515820 FHOD3Q2V2M9 1422 aa29.94■■■□□ 2.38
NKX6-1-202ENST00000515820 SUPT16HQ9Y5B9 1047 aaKnown RBP29.94■■■□□ 2.38
NKX6-1-202ENST00000515820 PBRM1Q86U86 1689 aa29.93■■■□□ 2.38
NKX6-1-202ENST00000515820 CTTNBP2Q8WZ74 1663 aa29.91■■■□□ 2.38
NKX6-1-202ENST00000515820 P3H3Q8IVL6 736 aa29.88■■■□□ 2.37
NKX6-1-202ENST00000515820 GRIN2BQ13224 1484 aa29.86■■■□□ 2.37
NKX6-1-202ENST00000515820 FBLN2P98095 1184 aa29.86■■■□□ 2.37
NKX6-1-202ENST00000515820 FMN1Q68DA7 1419 aa29.85■■■□□ 2.37
NKX6-1-202ENST00000515820 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
NKX6-1-202ENST00000515820 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
NKX6-1-202ENST00000515820 ATP1B4Q9UN42 357 aaPredicted RBP29.8■■■□□ 2.36
NKX6-1-202ENST00000515820 FGD6Q6ZV73 1430 aa29.78■■■□□ 2.36
NKX6-1-202ENST00000515820 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
NKX6-1-202ENST00000515820 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
NKX6-1-202ENST00000515820 SAMD9Q5K651 1589 aa29.72■■■□□ 2.35
NKX6-1-202ENST00000515820 KCNH8Q96L42 1107 aa29.71■■■□□ 2.35
NKX6-1-202ENST00000515820 DDX10Q13206 875 aaKnown RBP29.69■■■□□ 2.34
NKX6-1-202ENST00000515820 HFM1A2PYH4 1435 aa29.68■■■□□ 2.34
NKX6-1-202ENST00000515820 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
NKX6-1-202ENST00000515820 CCDC18Q5T9S5 1454 aa29.65■■■□□ 2.34
NKX6-1-202ENST00000515820 MTUS2Q5JR59 1369 aa29.65■■■□□ 2.34
NKX6-1-202ENST00000515820 UACAQ9BZF9 1416 aa29.63■■■□□ 2.33
NKX6-1-202ENST00000515820 PTPN23Q9H3S7 1636 aa29.61■■■□□ 2.33
NKX6-1-202ENST00000515820 CCER2I3L3R5 266 aa29.6■■■□□ 2.33
NKX6-1-202ENST00000515820 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
NKX6-1-202ENST00000515820 LRRIQ1Q96JM4 1722 aa29.58■■■□□ 2.33
NKX6-1-202ENST00000515820 MYOM3Q5VTT5 1437 aa29.58■■■□□ 2.33
NKX6-1-202ENST00000515820 NCOA2Q15596 1464 aa29.57■■■□□ 2.32
NKX6-1-202ENST00000515820 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
NKX6-1-202ENST00000515820 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
NKX6-1-202ENST00000515820 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
NKX6-1-202ENST00000515820 EHBP1L1Q8N3D4 1523 aa29.55■■■□□ 2.32
NKX6-1-202ENST00000515820 SUPT6HQ7KZ85 1726 aaKnown RBP29.54■■■□□ 2.32
NKX6-1-202ENST00000515820 NAIPQ13075 1403 aa29.53■■■□□ 2.32
NKX6-1-202ENST00000515820 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
NKX6-1-202ENST00000515820 ARHGEF11O15085 1522 aa29.49■■■□□ 2.31
NKX6-1-202ENST00000515820 ANP32CO43423 234 aa29.49■■■□□ 2.31
NKX6-1-202ENST00000515820 TSHZ2Q9NRE2 1034 aa29.48■■■□□ 2.31
NKX6-1-202ENST00000515820 UGGT2Q9NYU1 1516 aa29.47■■■□□ 2.31
NKX6-1-202ENST00000515820 CEP170Q5SW79 1584 aa29.44■■■□□ 2.3
NKX6-1-202ENST00000515820 HIRIP3Q9BW71 556 aaPredicted RBP29.42■■■□□ 2.3
NKX6-1-202ENST00000515820 TCOF1Q13428 1488 aaKnown RBP29.4■■■□□ 2.3
NKX6-1-202ENST00000515820 CHD1O14646 1710 aa29.4■■■□□ 2.3
NKX6-1-202ENST00000515820 KDM5BQ9UGL1 1544 aa29.4■■■□□ 2.3
NKX6-1-202ENST00000515820 AKNAQ7Z591 1439 aa29.36■■■□□ 2.29
NKX6-1-202ENST00000515820 IQGAP2Q13576 1575 aa29.36■■■□□ 2.29
NKX6-1-202ENST00000515820 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
NKX6-1-202ENST00000515820 GCC2Q8IWJ2 1684 aa29.34■■■□□ 2.29
NKX6-1-202ENST00000515820 FKBP8Q14318 412 aa29.33■■■□□ 2.29
NKX6-1-202ENST00000515820 HECW1Q76N89 1606 aa29.33■■■□□ 2.29
NKX6-1-202ENST00000515820 KIAA0586Q9BVV6 1533 aa29.28■■■□□ 2.28
NKX6-1-202ENST00000515820 NUP160Q12769 1436 aa29.27■■■□□ 2.28
NKX6-1-202ENST00000515820 NEFLP07196 543 aa29.26■■■□□ 2.28
NKX6-1-202ENST00000515820 MIA2Q96PC5 1412 aa29.25■■■□□ 2.27
NKX6-1-202ENST00000515820 EPRSP07814 1512 aaKnown RBP29.23■■■□□ 2.27
NKX6-1-202ENST00000515820 TRIM52Q96A61 297 aa29.23■■■□□ 2.27
NKX6-1-202ENST00000515820 DENND4BO75064 1496 aaPredicted RBP29.23■■■□□ 2.27
NKX6-1-202ENST00000515820 ARID3CA6NKF2 412 aa29.22■■■□□ 2.27
NKX6-1-202ENST00000515820 JPH4Q96JJ6 628 aa29.22■■■□□ 2.27
NKX6-1-202ENST00000515820 BCANQ96GW7 911 aa29.21■■■□□ 2.27
NKX6-1-202ENST00000515820 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
NKX6-1-202ENST00000515820 DISP1Q96F81 1524 aa29.16■■■□□ 2.26
NKX6-1-202ENST00000515820 KDM6BO15054 1643 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms