RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
CAST-244ENST00000515663 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
CAST-244ENST00000515663 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
CAST-244ENST00000515663 CLIP1P30622 1438 aa14.07□□□□□ -0.16
CAST-244ENST00000515663 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
CAST-244ENST00000515663 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
CAST-244ENST00000515663 SYNJ2O15056 1496 aa14□□□□□ -0.17
CAST-244ENST00000515663 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
CAST-244ENST00000515663 GRIN2AQ12879 1464 aa13.97□□□□□ -0.17
CAST-244ENST00000515663 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.17
CAST-244ENST00000515663 VPS8Q8N3P4 1428 aa13.96□□□□□ -0.17
CAST-244ENST00000515663 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
CAST-244ENST00000515663 ARAP1Q96P48 1450 aa13.96□□□□□ -0.18
CAST-244ENST00000515663 EFCAB5A4FU69 1503 aa13.93□□□□□ -0.18
CAST-244ENST00000515663 KIAA0586Q9BVV6 1533 aa13.93□□□□□ -0.18
CAST-244ENST00000515663 NUP160Q12769 1436 aa13.92□□□□□ -0.18
CAST-244ENST00000515663 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
CAST-244ENST00000515663 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
CAST-244ENST00000515663 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
CAST-244ENST00000515663 UGGT2Q9NYU1 1516 aa13.88□□□□□ -0.19
CAST-244ENST00000515663 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
CAST-244ENST00000515663 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
CAST-244ENST00000515663 FBLN2P98095 1184 aa13.82□□□□□ -0.2
CAST-244ENST00000515663 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
CAST-244ENST00000515663 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
CAST-244ENST00000515663 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
CAST-244ENST00000515663 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
CAST-244ENST00000515663 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
CAST-244ENST00000515663 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
CAST-244ENST00000515663 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
CAST-244ENST00000515663 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
CAST-244ENST00000515663 CHD1O14646 1710 aa13.77□□□□□ -0.21
CAST-244ENST00000515663 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
CAST-244ENST00000515663 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
CAST-244ENST00000515663 APLP2Q06481 763 aa13.74□□□□□ -0.21
CAST-244ENST00000515663 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
CAST-244ENST00000515663 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
CAST-244ENST00000515663 SHROOM2Q13796 1616 aa13.71□□□□□ -0.21
CAST-244ENST00000515663 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
CAST-244ENST00000515663 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
CAST-244ENST00000515663 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
CAST-244ENST00000515663 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
CAST-244ENST00000515663 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
CAST-244ENST00000515663 PCGF6Q9BYE7 350 aa13.67□□□□□ -0.22
CAST-244ENST00000515663 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
CAST-244ENST00000515663 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
CAST-244ENST00000515663 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
CAST-244ENST00000515663 HECW1Q76N89 1606 aa13.63□□□□□ -0.23
CAST-244ENST00000515663 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
CAST-244ENST00000515663 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
CAST-244ENST00000515663 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
CAST-244ENST00000515663 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
CAST-244ENST00000515663 ABCA8O94911 1581 aa13.6□□□□□ -0.23
CAST-244ENST00000515663 LRRIQ1Q96JM4 1722 aa13.59□□□□□ -0.23
CAST-244ENST00000515663 PTPRGP23470 1445 aa13.59□□□□□ -0.23
CAST-244ENST00000515663 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
CAST-244ENST00000515663 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
CAST-244ENST00000515663 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
CAST-244ENST00000515663 ERCC6L2Q5T890 1561 aa13.56□□□□□ -0.24
CAST-244ENST00000515663 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
CAST-244ENST00000515663 MTUS2Q5JR59 1369 aa13.54□□□□□ -0.24
CAST-244ENST00000515663 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
CAST-244ENST00000515663 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
CAST-244ENST00000515663 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
CAST-244ENST00000515663 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
CAST-244ENST00000515663 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.24
CAST-244ENST00000515663 PHLDB1Q86UU1 1377 aa13.51□□□□□ -0.25
CAST-244ENST00000515663 ATP10BO94823 1461 aa13.51□□□□□ -0.25
CAST-244ENST00000515663 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
CAST-244ENST00000515663 CDK11AQ9UQ88 783 aaPredicted RBP13.49□□□□□ -0.25
CAST-244ENST00000515663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAST-244ENST00000515663 NCOA2Q15596 1464 aa13.49□□□□□ -0.25
CAST-244ENST00000515663 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
CAST-244ENST00000515663 ABCC2Q92887 1545 aa13.48□□□□□ -0.25
CAST-244ENST00000515663 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
CAST-244ENST00000515663 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
CAST-244ENST00000515663 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
CAST-244ENST00000515663 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
CAST-244ENST00000515663 FGD6Q6ZV73 1430 aa13.43□□□□□ -0.26
CAST-244ENST00000515663 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
CAST-244ENST00000515663 ARID3CA6NKF2 412 aa13.42□□□□□ -0.26
CAST-244ENST00000515663 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
CAST-244ENST00000515663 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
CAST-244ENST00000515663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
CAST-244ENST00000515663 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
CAST-244ENST00000515663 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
CAST-244ENST00000515663 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
CAST-244ENST00000515663 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
CAST-244ENST00000515663 KIF14Q15058 1648 aa13.34□□□□□ -0.27
CAST-244ENST00000515663 ZCCHC11Q5TAX3 1644 aaKnown RBP13.34□□□□□ -0.27
CAST-244ENST00000515663 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
CAST-244ENST00000515663 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
CAST-244ENST00000515663 HRCP23327 699 aa13.29□□□□□ -0.28
CAST-244ENST00000515663 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
CAST-244ENST00000515663 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
CAST-244ENST00000515663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAST-244ENST00000515663 WDR7Q9Y4E6 1490 aa13.27□□□□□ -0.29
CAST-244ENST00000515663 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
CAST-244ENST00000515663 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
CAST-244ENST00000515663 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms