RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
ABCC3-216ENST00000515585 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
ABCC3-216ENST00000515585 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
ABCC3-216ENST00000515585 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
ABCC3-216ENST00000515585 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
ABCC3-216ENST00000515585 CLIP1P30622 1438 aa22.12■■□□□ 1.13
ABCC3-216ENST00000515585 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
ABCC3-216ENST00000515585 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
ABCC3-216ENST00000515585 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
ABCC3-216ENST00000515585 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
ABCC3-216ENST00000515585 FBLN2P98095 1184 aa22.01■■□□□ 1.11
ABCC3-216ENST00000515585 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
ABCC3-216ENST00000515585 SAMD9Q5K651 1589 aa22■■□□□ 1.11
ABCC3-216ENST00000515585 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
ABCC3-216ENST00000515585 NUP160Q12769 1436 aa21.97■■□□□ 1.11
ABCC3-216ENST00000515585 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
ABCC3-216ENST00000515585 CHD1O14646 1710 aa21.97■■□□□ 1.11
ABCC3-216ENST00000515585 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
ABCC3-216ENST00000515585 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
ABCC3-216ENST00000515585 UGGT2Q9NYU1 1516 aa21.92■■□□□ 1.1
ABCC3-216ENST00000515585 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
ABCC3-216ENST00000515585 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
ABCC3-216ENST00000515585 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
ABCC3-216ENST00000515585 SHROOM2Q13796 1616 aa21.77■■□□□ 1.08
ABCC3-216ENST00000515585 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
ABCC3-216ENST00000515585 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
ABCC3-216ENST00000515585 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
ABCC3-216ENST00000515585 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
ABCC3-216ENST00000515585 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
ABCC3-216ENST00000515585 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
ABCC3-216ENST00000515585 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
ABCC3-216ENST00000515585 CFAP43Q8NDM7 1665 aa21.69■■□□□ 1.06
ABCC3-216ENST00000515585 CASKIN1Q8WXD9 1431 aa21.69■■□□□ 1.06
ABCC3-216ENST00000515585 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
ABCC3-216ENST00000515585 TIAM1Q13009 1591 aa21.65■■□□□ 1.06
ABCC3-216ENST00000515585 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
ABCC3-216ENST00000515585 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
ABCC3-216ENST00000515585 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
ABCC3-216ENST00000515585 HECW1Q76N89 1606 aa21.56■■□□□ 1.04
ABCC3-216ENST00000515585 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
ABCC3-216ENST00000515585 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
ABCC3-216ENST00000515585 ABCA8O94911 1581 aa21.51■■□□□ 1.03
ABCC3-216ENST00000515585 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
ABCC3-216ENST00000515585 TRIM26Q12899 539 aaPredicted RBP21.49■■□□□ 1.03
ABCC3-216ENST00000515585 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
ABCC3-216ENST00000515585 LRRC9Q6ZRR7 1453 aa21.49■■□□□ 1.03
ABCC3-216ENST00000515585 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
ABCC3-216ENST00000515585 APLP2Q06481 763 aa21.46■■□□□ 1.03
ABCC3-216ENST00000515585 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
ABCC3-216ENST00000515585 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
ABCC3-216ENST00000515585 ILDR1Q86SU0 546 aaPredicted RBP21.45■■□□□ 1.02
ABCC3-216ENST00000515585 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
ABCC3-216ENST00000515585 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
ABCC3-216ENST00000515585 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
ABCC3-216ENST00000515585 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
ABCC3-216ENST00000515585 CDK13Q14004 1512 aaKnown RBP21.37■■□□□ 1.01
ABCC3-216ENST00000515585 PTPRGP23470 1445 aa21.36■■□□□ 1.01
ABCC3-216ENST00000515585 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
ABCC3-216ENST00000515585 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
ABCC3-216ENST00000515585 RRBP1Q9P2E9 1410 aaKnown RBP21.32■■□□□ 1
ABCC3-216ENST00000515585 ABCC2Q92887 1545 aa21.31■■□□□ 1
ABCC3-216ENST00000515585 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
ABCC3-216ENST00000515585 UACAQ9BZF9 1416 aa21.29■■□□□ 1
ABCC3-216ENST00000515585 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
ABCC3-216ENST00000515585 KDM4FA0A1W2PPD8 638 aa21.29■■□□□ 1
ABCC3-216ENST00000515585 ATP10BO94823 1461 aa21.26■□□□□ 0.99
ABCC3-216ENST00000515585 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
ABCC3-216ENST00000515585 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
ABCC3-216ENST00000515585 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
ABCC3-216ENST00000515585 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
ABCC3-216ENST00000515585 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
ABCC3-216ENST00000515585 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
ABCC3-216ENST00000515585 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
ABCC3-216ENST00000515585 KDM5BQ9UGL1 1544 aa21.2■□□□□ 0.98
ABCC3-216ENST00000515585 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
ABCC3-216ENST00000515585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.98
ABCC3-216ENST00000515585 KIF14Q15058 1648 aa21.15■□□□□ 0.98
ABCC3-216ENST00000515585 MYOM3Q5VTT5 1437 aa21.15■□□□□ 0.98
ABCC3-216ENST00000515585 CCNB3Q8WWL7 1395 aa21.15■□□□□ 0.98
ABCC3-216ENST00000515585 FGD6Q6ZV73 1430 aa21.13■□□□□ 0.97
ABCC3-216ENST00000515585 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
ABCC3-216ENST00000515585 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
ABCC3-216ENST00000515585 KIF13AQ9H1H9 1805 aa21.11■□□□□ 0.97
ABCC3-216ENST00000515585 ITSN2Q9NZM3 1697 aa21.1■□□□□ 0.97
ABCC3-216ENST00000515585 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
ABCC3-216ENST00000515585 NPM1P06748 294 aaKnown RBP eCLIP21.1■□□□□ 0.97
ABCC3-216ENST00000515585 CDC42BPAQ5VT25 1732 aa21.08■□□□□ 0.97
ABCC3-216ENST00000515585 MIA2Q96PC5 1412 aa21.08■□□□□ 0.97
ABCC3-216ENST00000515585 PTPN23Q9H3S7 1636 aa21.07■□□□□ 0.96
ABCC3-216ENST00000515585 ARID3CA6NKF2 412 aa21.07■□□□□ 0.96
ABCC3-216ENST00000515585 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
ABCC3-216ENST00000515585 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
ABCC3-216ENST00000515585 PREX2Q70Z35 1606 aa21■□□□□ 0.95
ABCC3-216ENST00000515585 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
ABCC3-216ENST00000515585 TTC37Q6PGP7 1564 aa20.98■□□□□ 0.95
ABCC3-216ENST00000515585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
ABCC3-216ENST00000515585 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
ABCC3-216ENST00000515585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.98■□□□□ 0.95
ABCC3-216ENST00000515585 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.94
ABCC3-216ENST00000515585 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms