RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
SNX2-213ENST00000514949 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
SNX2-213ENST00000514949 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
SNX2-213ENST00000514949 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
SNX2-213ENST00000514949 MIER1Q8N108 512 aa25.7■■□□□ 1.71
SNX2-213ENST00000514949 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.76e-6■■■■□ 25.1
SNX2-213ENST00000514949 NESP48681 1621 aa25.69■■□□□ 1.7
SNX2-213ENST00000514949 PCF11O94913 1555 aaKnown RBP25.68■■□□□ 1.7
SNX2-213ENST00000514949 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
SNX2-213ENST00000514949 FYCO1Q9BQS8 1478 aa25.67■■□□□ 1.7
SNX2-213ENST00000514949 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
SNX2-213ENST00000514949 GTF3C3Q9Y5Q9 886 aa25.64■■□□□ 1.7
SNX2-213ENST00000514949 PHLDB1Q86UU1 1377 aa25.64■■□□□ 1.69
SNX2-213ENST00000514949 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
SNX2-213ENST00000514949 RAB3GAP2Q9H2M9 1393 aa25.62■■□□□ 1.69
SNX2-213ENST00000514949 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
SNX2-213ENST00000514949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
SNX2-213ENST00000514949 SETD5Q9C0A6 1442 aa25.59■■□□□ 1.69
SNX2-213ENST00000514949 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
SNX2-213ENST00000514949 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
SNX2-213ENST00000514949 MAPKBP1O60336 1514 aa25.57■■□□□ 1.68
SNX2-213ENST00000514949 FMN1Q68DA7 1419 aa25.53■■□□□ 1.68
SNX2-213ENST00000514949 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
SNX2-213ENST00000514949 ITGAEP38570 1179 aa25.51■■□□□ 1.67
SNX2-213ENST00000514949 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
SNX2-213ENST00000514949 P3H3Q8IVL6 736 aa25.49■■□□□ 1.67
SNX2-213ENST00000514949 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
SNX2-213ENST00000514949 GAPVD1Q14C86 1478 aa25.46■■□□□ 1.67
SNX2-213ENST00000514949 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
SNX2-213ENST00000514949 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
SNX2-213ENST00000514949 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
SNX2-213ENST00000514949 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.66
SNX2-213ENST00000514949 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
SNX2-213ENST00000514949 FGD6Q6ZV73 1430 aa25.36■■□□□ 1.65
SNX2-213ENST00000514949 TARBP1Q13395 1621 aaKnown RBP25.36■■□□□ 1.65
SNX2-213ENST00000514949 GRIN2BQ13224 1484 aa25.35■■□□□ 1.65
SNX2-213ENST00000514949 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
SNX2-213ENST00000514949 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
SNX2-213ENST00000514949 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
SNX2-213ENST00000514949 MTUS2Q5JR59 1369 aa25.28■■□□□ 1.64
SNX2-213ENST00000514949 EHBP1L1Q8N3D4 1523 aa25.24■■□□□ 1.63
SNX2-213ENST00000514949 HFM1A2PYH4 1435 aa25.23■■□□□ 1.63
SNX2-213ENST00000514949 NCOA2Q15596 1464 aa25.23■■□□□ 1.63
SNX2-213ENST00000514949 MYOM3Q5VTT5 1437 aa25.22■■□□□ 1.63
SNX2-213ENST00000514949 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
SNX2-213ENST00000514949 SUPT6HQ7KZ85 1726 aaKnown RBP25.22■■□□□ 1.63
SNX2-213ENST00000514949 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
SNX2-213ENST00000514949 PBRM1Q86U86 1689 aa25.19■■□□□ 1.62
SNX2-213ENST00000514949 CCDC18Q5T9S5 1454 aa25.19■■□□□ 1.62
SNX2-213ENST00000514949 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
SNX2-213ENST00000514949 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
SNX2-213ENST00000514949 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
SNX2-213ENST00000514949 PTPN23Q9H3S7 1636 aa25.16■■□□□ 1.62
SNX2-213ENST00000514949 UACAQ9BZF9 1416 aa25.15■■□□□ 1.62
SNX2-213ENST00000514949 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
SNX2-213ENST00000514949 PPP1R15AO75807 674 aaPredicted RBP25.13■■□□□ 1.61
SNX2-213ENST00000514949 IQGAP2Q13576 1575 aa25.12■■□□□ 1.61
SNX2-213ENST00000514949 NAIPQ13075 1403 aa25.11■■□□□ 1.61
SNX2-213ENST00000514949 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
SNX2-213ENST00000514949 HECW1Q76N89 1606 aa25.1■■□□□ 1.61
SNX2-213ENST00000514949 TCOF1Q13428 1488 aaKnown RBP25.1■■□□□ 1.61
SNX2-213ENST00000514949 MAGI3Q5TCQ9 1506 aa25.09■■□□□ 1.61
SNX2-213ENST00000514949 EPRSP07814 1512 aaKnown RBP25.03■■□□□ 1.6
SNX2-213ENST00000514949 AKNAQ7Z591 1439 aa25.03■■□□□ 1.6
SNX2-213ENST00000514949 IFT140Q96RY7 1462 aa25■■□□□ 1.59
SNX2-213ENST00000514949 WDR62O43379 1518 aa25■■□□□ 1.59
SNX2-213ENST00000514949 MIA2Q96PC5 1412 aa25■■□□□ 1.59
SNX2-213ENST00000514949 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
SNX2-213ENST00000514949 TONSLQ96HA7 1378 aa24.97■■□□□ 1.59
SNX2-213ENST00000514949 DDX10Q13206 875 aaKnown RBP24.92■■□□□ 1.58
SNX2-213ENST00000514949 KIAA0586Q9BVV6 1533 aa24.92■■□□□ 1.58
SNX2-213ENST00000514949 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
SNX2-213ENST00000514949 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
SNX2-213ENST00000514949 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
SNX2-213ENST00000514949 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
SNX2-213ENST00000514949 DISP1Q96F81 1524 aa24.86■■□□□ 1.57
SNX2-213ENST00000514949 CCER2I3L3R5 266 aa24.85■■□□□ 1.57
SNX2-213ENST00000514949 DENND4BO75064 1496 aaPredicted RBP24.84■■□□□ 1.57
SNX2-213ENST00000514949 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
SNX2-213ENST00000514949 SUPT16HQ9Y5B9 1047 aaKnown RBP24.83■■□□□ 1.57
SNX2-213ENST00000514949 ROCK1Q13464 1354 aa24.8■■□□□ 1.56
SNX2-213ENST00000514949 GRIN2AQ12879 1464 aa24.8■■□□□ 1.56
SNX2-213ENST00000514949 RRP7BPQ9NSQ0 103 aa24.79■■□□□ 1.56
SNX2-213ENST00000514949 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
SNX2-213ENST00000514949 KDM6BO15054 1643 aa24.77■■□□□ 1.56
SNX2-213ENST00000514949 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
SNX2-213ENST00000514949 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
SNX2-213ENST00000514949 DNMT1P26358 1616 aaKnown RBP24.73■■□□□ 1.55
SNX2-213ENST00000514949 ANP32CO43423 234 aa24.73■■□□□ 1.55
SNX2-213ENST00000514949 CHIC2Q9UKJ5 165 aa24.73■■□□□ 1.55
SNX2-213ENST00000514949 HIRIP3Q9BW71 556 aaPredicted RBP24.73■■□□□ 1.55
SNX2-213ENST00000514949 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
SNX2-213ENST00000514949 DAPK1P53355 1430 aa24.72■■□□□ 1.55
SNX2-213ENST00000514949 MPHOSPH9Q99550 1183 aa24.7■■□□□ 1.54
SNX2-213ENST00000514949 ABCC5O15440 1437 aa24.69■■□□□ 1.54
SNX2-213ENST00000514949 CDK11AQ9UQ88 783 aaPredicted RBP24.68■■□□□ 1.54
SNX2-213ENST00000514949 TRIM52Q96A61 297 aa24.65■■□□□ 1.54
SNX2-213ENST00000514949 SYNJ2O15056 1496 aa24.64■■□□□ 1.53
SNX2-213ENST00000514949 TROQ12816 1431 aaPredicted RBP24.63■■□□□ 1.53
SNX2-213ENST00000514949 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms