RNA–Protein interactions for RNA: ENST00000514558.5

TMEM144-216, Transcript of transmembrane protein 144, humanhuman

TSL 1 (best) BASIC

Gene TMEM144, Length 3,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM144-216ENST00000514558 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
TMEM144-216ENST00000514558 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
TMEM144-216ENST00000514558 CUX2O14529 1486 aa12.53□□□□□ -0.4
TMEM144-216ENST00000514558 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
TMEM144-216ENST00000514558 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.4
TMEM144-216ENST00000514558 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
TMEM144-216ENST00000514558 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
TMEM144-216ENST00000514558 BCANQ96GW7 911 aa12.49□□□□□ -0.41
TMEM144-216ENST00000514558 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
TMEM144-216ENST00000514558 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
TMEM144-216ENST00000514558 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
TMEM144-216ENST00000514558 SETD5Q9C0A6 1442 aa12.46□□□□□ -0.42
TMEM144-216ENST00000514558 KCNH8Q96L42 1107 aa12.45□□□□□ -0.42
TMEM144-216ENST00000514558 NEFLP07196 543 aa12.44□□□□□ -0.42
TMEM144-216ENST00000514558 IGF1RP08069 1367 aa12.44□□□□□ -0.42
TMEM144-216ENST00000514558 HIRIP3Q9BW71 556 aaPredicted RBP12.43□□□□□ -0.42
TMEM144-216ENST00000514558 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
TMEM144-216ENST00000514558 TIAM1Q13009 1591 aa12.42□□□□□ -0.42
TMEM144-216ENST00000514558 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
TMEM144-216ENST00000514558 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
TMEM144-216ENST00000514558 FKBP8Q14318 412 aa12.4□□□□□ -0.43
TMEM144-216ENST00000514558 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
TMEM144-216ENST00000514558 ANP32CO43423 234 aa12.39□□□□□ -0.43
TMEM144-216ENST00000514558 FGD5Q6ZNL6 1462 aa12.39□□□□□ -0.43
TMEM144-216ENST00000514558 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
TMEM144-216ENST00000514558 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
TMEM144-216ENST00000514558 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
TMEM144-216ENST00000514558 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
TMEM144-216ENST00000514558 CUL7Q14999 1698 aa12.36□□□□□ -0.43
TMEM144-216ENST00000514558 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
TMEM144-216ENST00000514558 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
TMEM144-216ENST00000514558 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
TMEM144-216ENST00000514558 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
TMEM144-216ENST00000514558 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
TMEM144-216ENST00000514558 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
TMEM144-216ENST00000514558 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
TMEM144-216ENST00000514558 PCF11O94913 1555 aaKnown RBP12.31□□□□□ -0.44
TMEM144-216ENST00000514558 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
TMEM144-216ENST00000514558 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
TMEM144-216ENST00000514558 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
TMEM144-216ENST00000514558 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.44
TMEM144-216ENST00000514558 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.44
TMEM144-216ENST00000514558 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
TMEM144-216ENST00000514558 FYCO1Q9BQS8 1478 aa12.25□□□□□ -0.45
TMEM144-216ENST00000514558 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
TMEM144-216ENST00000514558 ADAMTS12P58397 1594 aa12.25□□□□□ -0.45
TMEM144-216ENST00000514558 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
TMEM144-216ENST00000514558 CASKIN1Q8WXD9 1431 aa12.23□□□□□ -0.45
TMEM144-216ENST00000514558 CCDC18Q5T9S5 1454 aa12.23□□□□□ -0.45
TMEM144-216ENST00000514558 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
TMEM144-216ENST00000514558 ANP32EQ9BTT0 268 aa12.22□□□□□ -0.45
TMEM144-216ENST00000514558 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
TMEM144-216ENST00000514558 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
TMEM144-216ENST00000514558 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.46
TMEM144-216ENST00000514558 RRP7BPQ9NSQ0 103 aa12.21□□□□□ -0.46
TMEM144-216ENST00000514558 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
TMEM144-216ENST00000514558 ARID3CA6NKF2 412 aa12.19□□□□□ -0.46
TMEM144-216ENST00000514558 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
TMEM144-216ENST00000514558 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
TMEM144-216ENST00000514558 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
TMEM144-216ENST00000514558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM144-216ENST00000514558 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
TMEM144-216ENST00000514558 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
TMEM144-216ENST00000514558 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
TMEM144-216ENST00000514558 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM144-216ENST00000514558 NESP48681 1621 aa12.15□□□□□ -0.46
TMEM144-216ENST00000514558 HFM1A2PYH4 1435 aa12.14□□□□□ -0.47
TMEM144-216ENST00000514558 RBM19Q9Y4C8 960 aaKnown RBP12.14□□□□□ -0.47
TMEM144-216ENST00000514558 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
TMEM144-216ENST00000514558 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
TMEM144-216ENST00000514558 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
TMEM144-216ENST00000514558 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
TMEM144-216ENST00000514558 HSPA5P11021 654 aaKnown RBP12.12□□□□□ -0.47
TMEM144-216ENST00000514558 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM144-216ENST00000514558 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
TMEM144-216ENST00000514558 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
TMEM144-216ENST00000514558 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
TMEM144-216ENST00000514558 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
TMEM144-216ENST00000514558 NAIPQ13075 1403 aa12.11□□□□□ -0.47
TMEM144-216ENST00000514558 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
TMEM144-216ENST00000514558 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
TMEM144-216ENST00000514558 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
TMEM144-216ENST00000514558 POLR3GLQ9BT43 218 aa12.09□□□□□ -0.47
TMEM144-216ENST00000514558 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
TMEM144-216ENST00000514558 FOXD1Q16676 465 aa12.07□□□□□ -0.48
TMEM144-216ENST00000514558 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
TMEM144-216ENST00000514558 EHBP1L1Q8N3D4 1523 aa12.06□□□□□ -0.48
TMEM144-216ENST00000514558 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
TMEM144-216ENST00000514558 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
TMEM144-216ENST00000514558 MPHOSPH9Q99550 1183 aa12.05□□□□□ -0.48
TMEM144-216ENST00000514558 CHD1O14646 1710 aa12.04□□□□□ -0.48
TMEM144-216ENST00000514558 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
TMEM144-216ENST00000514558 GRIN2BQ13224 1484 aa12.03□□□□□ -0.48
TMEM144-216ENST00000514558 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.48
TMEM144-216ENST00000514558 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
TMEM144-216ENST00000514558 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TMEM144-216ENST00000514558 CEP170Q5SW79 1584 aa12□□□□□ -0.49
TMEM144-216ENST00000514558 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
TMEM144-216ENST00000514558 CNTLNQ9NXG0 1405 aa11.99□□□□□ -0.49
TMEM144-216ENST00000514558 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 470.8 ms