RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
SDHA-216ENST00000514027 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
SDHA-216ENST00000514027 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
SDHA-216ENST00000514027 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
SDHA-216ENST00000514027 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
SDHA-216ENST00000514027 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
SDHA-216ENST00000514027 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
SDHA-216ENST00000514027 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
SDHA-216ENST00000514027 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
SDHA-216ENST00000514027 LRRC9Q6ZRR7 1453 aa18.38■□□□□ 0.53
SDHA-216ENST00000514027 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
SDHA-216ENST00000514027 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
SDHA-216ENST00000514027 CUL7Q14999 1698 aa18.37■□□□□ 0.53
SDHA-216ENST00000514027 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
SDHA-216ENST00000514027 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
SDHA-216ENST00000514027 MIER1Q8N108 512 aa18.35■□□□□ 0.53
SDHA-216ENST00000514027 CFAP43Q8NDM7 1665 aa18.35■□□□□ 0.53
SDHA-216ENST00000514027 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
SDHA-216ENST00000514027 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
SDHA-216ENST00000514027 PRKCSHP14314 528 aaPredicted RBP18.32■□□□□ 0.52
SDHA-216ENST00000514027 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
SDHA-216ENST00000514027 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
SDHA-216ENST00000514027 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
SDHA-216ENST00000514027 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
SDHA-216ENST00000514027 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
SDHA-216ENST00000514027 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
SDHA-216ENST00000514027 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
SDHA-216ENST00000514027 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
SDHA-216ENST00000514027 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
SDHA-216ENST00000514027 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
SDHA-216ENST00000514027 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SDHA-216ENST00000514027 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
SDHA-216ENST00000514027 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.5
SDHA-216ENST00000514027 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
SDHA-216ENST00000514027 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■■■■■ 30.9
SDHA-216ENST00000514027 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
SDHA-216ENST00000514027 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
SDHA-216ENST00000514027 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
SDHA-216ENST00000514027 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
SDHA-216ENST00000514027 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
SDHA-216ENST00000514027 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
SDHA-216ENST00000514027 FGD6Q6ZV73 1430 aa18.09■□□□□ 0.49
SDHA-216ENST00000514027 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
SDHA-216ENST00000514027 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
SDHA-216ENST00000514027 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
SDHA-216ENST00000514027 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
SDHA-216ENST00000514027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
SDHA-216ENST00000514027 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
SDHA-216ENST00000514027 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
SDHA-216ENST00000514027 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
SDHA-216ENST00000514027 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
SDHA-216ENST00000514027 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
SDHA-216ENST00000514027 MYOM3Q5VTT5 1437 aa17.99■□□□□ 0.47
SDHA-216ENST00000514027 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
SDHA-216ENST00000514027 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
SDHA-216ENST00000514027 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
SDHA-216ENST00000514027 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
SDHA-216ENST00000514027 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
SDHA-216ENST00000514027 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
SDHA-216ENST00000514027 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
SDHA-216ENST00000514027 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
SDHA-216ENST00000514027 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
SDHA-216ENST00000514027 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
SDHA-216ENST00000514027 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
SDHA-216ENST00000514027 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
SDHA-216ENST00000514027 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
SDHA-216ENST00000514027 WDR62O43379 1518 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 NAIPQ13075 1403 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
SDHA-216ENST00000514027 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
SDHA-216ENST00000514027 HIRIP3Q9BW71 556 aaPredicted RBP17.87■□□□□ 0.45
SDHA-216ENST00000514027 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
SDHA-216ENST00000514027 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
SDHA-216ENST00000514027 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
SDHA-216ENST00000514027 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
SDHA-216ENST00000514027 PPP1R15AO75807 674 aaPredicted RBP17.86■□□□□ 0.45
SDHA-216ENST00000514027 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
SDHA-216ENST00000514027 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
SDHA-216ENST00000514027 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
SDHA-216ENST00000514027 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
SDHA-216ENST00000514027 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
SDHA-216ENST00000514027 GCC2Q8IWJ2 1684 aa17.78■□□□□ 0.44
SDHA-216ENST00000514027 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
SDHA-216ENST00000514027 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
SDHA-216ENST00000514027 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
SDHA-216ENST00000514027 SUPT16HQ9Y5B9 1047 aaKnown RBP17.76■□□□□ 0.43
SDHA-216ENST00000514027 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
SDHA-216ENST00000514027 DISP1Q96F81 1524 aa17.75■□□□□ 0.43
SDHA-216ENST00000514027 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
SDHA-216ENST00000514027 KDM6BO15054 1643 aa17.74■□□□□ 0.43
SDHA-216ENST00000514027 RAPGEF6Q8TEU7 1601 aa17.71■□□□□ 0.43
SDHA-216ENST00000514027 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
SDHA-216ENST00000514027 FBLN2P98095 1184 aa17.7■□□□□ 0.42
SDHA-216ENST00000514027 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
SDHA-216ENST00000514027 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
SDHA-216ENST00000514027 ANP32CO43423 234 aa17.67■□□□□ 0.42
SDHA-216ENST00000514027 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms