RNA–Protein interactions for RNA: ENST00000513799.5

TMED9-206, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-206ENST00000513799 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
TMED9-206ENST00000513799 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
TMED9-206ENST00000513799 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
TMED9-206ENST00000513799 KIF21BO75037 1637 aa19.83■□□□□ 0.76
TMED9-206ENST00000513799 NUP160Q12769 1436 aa19.82■□□□□ 0.76
TMED9-206ENST00000513799 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
TMED9-206ENST00000513799 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
TMED9-206ENST00000513799 CTTNBP2Q8WZ74 1663 aa19.68■□□□□ 0.74
TMED9-206ENST00000513799 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
TMED9-206ENST00000513799 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
TMED9-206ENST00000513799 IQGAP2Q13576 1575 aa19.65■□□□□ 0.74
TMED9-206ENST00000513799 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
TMED9-206ENST00000513799 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
TMED9-206ENST00000513799 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
TMED9-206ENST00000513799 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
TMED9-206ENST00000513799 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
TMED9-206ENST00000513799 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
TMED9-206ENST00000513799 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
TMED9-206ENST00000513799 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
TMED9-206ENST00000513799 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
TMED9-206ENST00000513799 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
TMED9-206ENST00000513799 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
TMED9-206ENST00000513799 EFCAB5A4FU69 1503 aa19.42■□□□□ 0.7
TMED9-206ENST00000513799 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
TMED9-206ENST00000513799 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
TMED9-206ENST00000513799 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
TMED9-206ENST00000513799 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
TMED9-206ENST00000513799 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.693e-6■■□□□ 14.4
TMED9-206ENST00000513799 CLIP1P30622 1438 aa19.34■□□□□ 0.69
TMED9-206ENST00000513799 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
TMED9-206ENST00000513799 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
TMED9-206ENST00000513799 PTPRGP23470 1445 aa19.3■□□□□ 0.68
TMED9-206ENST00000513799 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
TMED9-206ENST00000513799 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
TMED9-206ENST00000513799 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
TMED9-206ENST00000513799 ABCA8O94911 1581 aa19.24■□□□□ 0.67
TMED9-206ENST00000513799 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
TMED9-206ENST00000513799 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
TMED9-206ENST00000513799 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
TMED9-206ENST00000513799 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
TMED9-206ENST00000513799 UHRF1BP1LA0JNW5 1464 aa19.19■□□□□ 0.66
TMED9-206ENST00000513799 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
TMED9-206ENST00000513799 FMN1Q68DA7 1419 aa19.18■□□□□ 0.66
TMED9-206ENST00000513799 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
TMED9-206ENST00000513799 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
TMED9-206ENST00000513799 DIP2BQ9P265 1576 aa19.15■□□□□ 0.66
TMED9-206ENST00000513799 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
TMED9-206ENST00000513799 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
TMED9-206ENST00000513799 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
TMED9-206ENST00000513799 VPS8Q8N3P4 1428 aa19.1■□□□□ 0.65
TMED9-206ENST00000513799 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
TMED9-206ENST00000513799 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
TMED9-206ENST00000513799 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
TMED9-206ENST00000513799 ZCCHC11Q5TAX3 1644 aaKnown RBP19.08■□□□□ 0.65
TMED9-206ENST00000513799 TSPOAP1O95153 1857 aa19.08■□□□□ 0.65
TMED9-206ENST00000513799 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
TMED9-206ENST00000513799 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
TMED9-206ENST00000513799 ATP10BO94823 1461 aa19.04■□□□□ 0.64
TMED9-206ENST00000513799 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
TMED9-206ENST00000513799 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
TMED9-206ENST00000513799 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
TMED9-206ENST00000513799 KDM6BO15054 1643 aa18.99■□□□□ 0.63
TMED9-206ENST00000513799 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
TMED9-206ENST00000513799 GLI2P10070 1586 aa18.98■□□□□ 0.63
TMED9-206ENST00000513799 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
TMED9-206ENST00000513799 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
TMED9-206ENST00000513799 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
TMED9-206ENST00000513799 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
TMED9-206ENST00000513799 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
TMED9-206ENST00000513799 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
TMED9-206ENST00000513799 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.62
TMED9-206ENST00000513799 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
TMED9-206ENST00000513799 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
TMED9-206ENST00000513799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
TMED9-206ENST00000513799 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
TMED9-206ENST00000513799 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
TMED9-206ENST00000513799 TROQ12816 1431 aaPredicted RBP18.85■□□□□ 0.61
TMED9-206ENST00000513799 KIF14Q15058 1648 aa18.84■□□□□ 0.61
TMED9-206ENST00000513799 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
TMED9-206ENST00000513799 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
TMED9-206ENST00000513799 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
TMED9-206ENST00000513799 CDK11AQ9UQ88 783 aaPredicted RBP18.8■□□□□ 0.6
TMED9-206ENST00000513799 ABCA9Q8IUA7 1624 aa18.79■□□□□ 0.6
TMED9-206ENST00000513799 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
TMED9-206ENST00000513799 TTC37Q6PGP7 1564 aa18.79■□□□□ 0.6
TMED9-206ENST00000513799 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
TMED9-206ENST00000513799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■■□□ 14.8
TMED9-206ENST00000513799 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
TMED9-206ENST00000513799 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
TMED9-206ENST00000513799 APLP2Q06481 763 aa18.72■□□□□ 0.59
TMED9-206ENST00000513799 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
TMED9-206ENST00000513799 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
TMED9-206ENST00000513799 MYO5CQ9NQX4 1742 aa18.67■□□□□ 0.58
TMED9-206ENST00000513799 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
TMED9-206ENST00000513799 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
TMED9-206ENST00000513799 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.58
TMED9-206ENST00000513799 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.58
TMED9-206ENST00000513799 PLCH2O75038 1416 aa18.64■□□□□ 0.57
TMED9-206ENST00000513799 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
TMED9-206ENST00000513799 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms