RNA–Protein interactions for RNA: ENST00000513646.1

SLC1A3-212, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-212ENST00000513646 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
SLC1A3-212ENST00000513646 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
SLC1A3-212ENST00000513646 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
SLC1A3-212ENST00000513646 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
SLC1A3-212ENST00000513646 PBRM1Q86U86 1689 aa14.09□□□□□ -0.15
SLC1A3-212ENST00000513646 PRG4Q92954 1404 aaPredicted RBP14.08□□□□□ -0.15
SLC1A3-212ENST00000513646 PPRC1Q5VV67 1664 aaKnown RBP14.08□□□□□ -0.16
SLC1A3-212ENST00000513646 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.16
SLC1A3-212ENST00000513646 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
SLC1A3-212ENST00000513646 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
SLC1A3-212ENST00000513646 HSPA2P54652 639 aa14.03□□□□□ -0.16
SLC1A3-212ENST00000513646 NUP160Q12769 1436 aa14.03□□□□□ -0.16
SLC1A3-212ENST00000513646 PTPRMP28827 1452 aa14.03□□□□□ -0.16
SLC1A3-212ENST00000513646 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
SLC1A3-212ENST00000513646 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
SLC1A3-212ENST00000513646 KIF21BO75037 1637 aa13.96□□□□□ -0.17
SLC1A3-212ENST00000513646 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
SLC1A3-212ENST00000513646 GLI2P10070 1586 aa13.92□□□□□ -0.18
SLC1A3-212ENST00000513646 TEX14Q8IWB6 1497 aa13.92□□□□□ -0.18
SLC1A3-212ENST00000513646 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
SLC1A3-212ENST00000513646 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
SLC1A3-212ENST00000513646 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
SLC1A3-212ENST00000513646 PLB1Q6P1J6 1458 aa13.86□□□□□ -0.19
SLC1A3-212ENST00000513646 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
SLC1A3-212ENST00000513646 ABCA5Q8WWZ7 1642 aa13.84□□□□□ -0.19
SLC1A3-212ENST00000513646 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
SLC1A3-212ENST00000513646 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
SLC1A3-212ENST00000513646 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
SLC1A3-212ENST00000513646 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
SLC1A3-212ENST00000513646 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
SLC1A3-212ENST00000513646 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
SLC1A3-212ENST00000513646 CUX1P39880 1505 aa13.78□□□□□ -0.2
SLC1A3-212ENST00000513646 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
SLC1A3-212ENST00000513646 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
SLC1A3-212ENST00000513646 ABCC2Q92887 1545 aa13.75□□□□□ -0.21
SLC1A3-212ENST00000513646 ARID4BQ4LE39 1312 aaPredicted RBP13.74□□□□□ -0.21
SLC1A3-212ENST00000513646 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
SLC1A3-212ENST00000513646 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
SLC1A3-212ENST00000513646 CUL7Q14999 1698 aa13.72□□□□□ -0.21
SLC1A3-212ENST00000513646 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
SLC1A3-212ENST00000513646 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
SLC1A3-212ENST00000513646 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
SLC1A3-212ENST00000513646 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
SLC1A3-212ENST00000513646 PTPRGP23470 1445 aa13.68□□□□□ -0.22
SLC1A3-212ENST00000513646 YEATS2Q9ULM3 1422 aa13.67□□□□□ -0.22
SLC1A3-212ENST00000513646 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
SLC1A3-212ENST00000513646 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
SLC1A3-212ENST00000513646 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
SLC1A3-212ENST00000513646 HSPA1LP34931 641 aa13.6□□□□□ -0.23
SLC1A3-212ENST00000513646 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
SLC1A3-212ENST00000513646 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
SLC1A3-212ENST00000513646 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
SLC1A3-212ENST00000513646 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
SLC1A3-212ENST00000513646 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
SLC1A3-212ENST00000513646 PTPRTO14522 1441 aa13.54□□□□□ -0.24
SLC1A3-212ENST00000513646 UHRF1BP1LA0JNW5 1464 aa13.54□□□□□ -0.24
SLC1A3-212ENST00000513646 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
SLC1A3-212ENST00000513646 ARAP3Q8WWN8 1544 aa13.51□□□□□ -0.25
SLC1A3-212ENST00000513646 UACAQ9BZF9 1416 aa13.51□□□□□ -0.25
SLC1A3-212ENST00000513646 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
SLC1A3-212ENST00000513646 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
SLC1A3-212ENST00000513646 PIP4K2BP78356 416 aa13.5□□□□□ -0.25
SLC1A3-212ENST00000513646 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
SLC1A3-212ENST00000513646 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
SLC1A3-212ENST00000513646 WDR7Q9Y4E6 1490 aa13.49□□□□□ -0.25
SLC1A3-212ENST00000513646 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
SLC1A3-212ENST00000513646 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
SLC1A3-212ENST00000513646 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
SLC1A3-212ENST00000513646 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
SLC1A3-212ENST00000513646 MLECQ14165 292 aa13.43□□□□□ -0.26
SLC1A3-212ENST00000513646 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
SLC1A3-212ENST00000513646 RGS17Q9UGC6 210 aaPredicted RBP13.43□□□□□ -0.26
SLC1A3-212ENST00000513646 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
SLC1A3-212ENST00000513646 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
SLC1A3-212ENST00000513646 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
SLC1A3-212ENST00000513646 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
SLC1A3-212ENST00000513646 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
SLC1A3-212ENST00000513646 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
SLC1A3-212ENST00000513646 FANCAO15360 1455 aa13.36□□□□□ -0.27
SLC1A3-212ENST00000513646 TOM1O60784 492 aa13.35□□□□□ -0.27
SLC1A3-212ENST00000513646 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
SLC1A3-212ENST00000513646 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
SLC1A3-212ENST00000513646 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.27
SLC1A3-212ENST00000513646 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
SLC1A3-212ENST00000513646 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
SLC1A3-212ENST00000513646 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC1A3-212ENST00000513646 NCOA1Q15788 1441 aa13.28□□□□□ -0.28
SLC1A3-212ENST00000513646 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
SLC1A3-212ENST00000513646 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
SLC1A3-212ENST00000513646 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
SLC1A3-212ENST00000513646 SIGLEC1Q9BZZ2 1709 aa13.26□□□□□ -0.29
SLC1A3-212ENST00000513646 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
SLC1A3-212ENST00000513646 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
SLC1A3-212ENST00000513646 NEO1Q92859 1461 aa13.22□□□□□ -0.29
SLC1A3-212ENST00000513646 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
SLC1A3-212ENST00000513646 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
SLC1A3-212ENST00000513646 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
SLC1A3-212ENST00000513646 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
SLC1A3-212ENST00000513646 ZFYVE16Q7Z3T8 1539 aa13.17□□□□□ -0.3
SLC1A3-212ENST00000513646 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms