RNA–Protein interactions for RNA: ENST00000513458.8

SREK1IP1-204, Transcript of SREK1 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREK1IP1, Length 6,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-204ENST00000513458 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
SREK1IP1-204ENST00000513458 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
SREK1IP1-204ENST00000513458 BCANQ96GW7 911 aa8.8□□□□□ -1
SREK1IP1-204ENST00000513458 CHGAP10645 457 aaKnown RBP8.8□□□□□ -1
SREK1IP1-204ENST00000513458 CC2D2AQ9P2K1 1620 aa8.8□□□□□ -1
SREK1IP1-204ENST00000513458 ERICH6Q7L0X2 663 aa8.8□□□□□ -1
SREK1IP1-204ENST00000513458 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
SREK1IP1-204ENST00000513458 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
SREK1IP1-204ENST00000513458 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
SREK1IP1-204ENST00000513458 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
SREK1IP1-204ENST00000513458 KANK4Q5T7N3 995 aaPredicted RBP8.76□□□□□ -1.01
SREK1IP1-204ENST00000513458 FMN1Q68DA7 1419 aa8.75□□□□□ -1.01
SREK1IP1-204ENST00000513458 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
SREK1IP1-204ENST00000513458 KDM2AQ9Y2K7 1162 aa8.75□□□□□ -1.01
SREK1IP1-204ENST00000513458 DDX10Q13206 875 aaKnown RBP8.74□□□□□ -1.01
SREK1IP1-204ENST00000513458 CFTRP13569 1480 aa8.74□□□□□ -1.01
SREK1IP1-204ENST00000513458 ACIN1Q9UKV3 1341 aaKnown RBP8.73□□□□□ -1.01
SREK1IP1-204ENST00000513458 PLPPR3Q6T4P5 718 aa8.73□□□□□ -1.01
SREK1IP1-204ENST00000513458 RAD54L2Q9Y4B4 1467 aa8.72□□□□□ -1.01
SREK1IP1-204ENST00000513458 ARHGAP35Q9NRY4 1499 aa8.72□□□□□ -1.01
SREK1IP1-204ENST00000513458 FHOD3Q2V2M9 1422 aa8.72□□□□□ -1.01
SREK1IP1-204ENST00000513458 GAPVD1Q14C86 1478 aa8.71□□□□□ -1.01
SREK1IP1-204ENST00000513458 SYNJ1O43426 1573 aa8.71□□□□□ -1.02
SREK1IP1-204ENST00000513458 NESP48681 1621 aa8.71□□□□□ -1.02
SREK1IP1-204ENST00000513458 IGF1RP08069 1367 aa8.7□□□□□ -1.02
SREK1IP1-204ENST00000513458 JPH4Q96JJ6 628 aa8.7□□□□□ -1.02
SREK1IP1-204ENST00000513458 HIRIP3Q9BW71 556 aaPredicted RBP8.69□□□□□ -1.02
SREK1IP1-204ENST00000513458 RGL3Q3MIN7 710 aa8.67□□□□□ -1.02
SREK1IP1-204ENST00000513458 EIF4G2P78344 907 aaKnown RBP eCLIP8.67□□□□□ -1.02
SREK1IP1-204ENST00000513458 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
SREK1IP1-204ENST00000513458 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
SREK1IP1-204ENST00000513458 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
SREK1IP1-204ENST00000513458 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
SREK1IP1-204ENST00000513458 SETD5Q9C0A6 1442 aa8.65□□□□□ -1.02
SREK1IP1-204ENST00000513458 CUX1P39880 1505 aa8.64□□□□□ -1.03
SREK1IP1-204ENST00000513458 AQRO60306 1485 aaKnown RBP eCLIP8.64□□□□□ -1.03
SREK1IP1-204ENST00000513458 PEG3Q9GZU2 1588 aa8.63□□□□□ -1.03
SREK1IP1-204ENST00000513458 KIF21BO75037 1637 aa8.63□□□□□ -1.03
SREK1IP1-204ENST00000513458 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
SREK1IP1-204ENST00000513458 NEFMP07197 916 aa8.62□□□□□ -1.03
SREK1IP1-204ENST00000513458 CCDC18Q5T9S5 1454 aa8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 MIER1Q8N108 512 aa8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 SENP3Q9H4L4 574 aaPredicted RBP8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 ARID4BQ4LE39 1312 aaPredicted RBP8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
SREK1IP1-204ENST00000513458 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
SREK1IP1-204ENST00000513458 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
SREK1IP1-204ENST00000513458 HNRNPUQ00839 825 aaKnown RBP eCLIP8.6□□□□□ -1.03
SREK1IP1-204ENST00000513458 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
SREK1IP1-204ENST00000513458 POLA1P09884 1462 aaPredicted RBP8.6□□□□□ -1.03
SREK1IP1-204ENST00000513458 ERICH3Q5RHP9 1530 aa8.59□□□□□ -1.03
SREK1IP1-204ENST00000513458 EFCAB2Q5VUJ9 269 aa8.59□□□□□ -1.03
SREK1IP1-204ENST00000513458 GRIN2BQ13224 1484 aa8.59□□□□□ -1.03
SREK1IP1-204ENST00000513458 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
SREK1IP1-204ENST00000513458 LAMC3Q9Y6N6 1575 aa8.59□□□□□ -1.03
SREK1IP1-204ENST00000513458 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
SREK1IP1-204ENST00000513458 PTPRGP23470 1445 aa8.58□□□□□ -1.04
SREK1IP1-204ENST00000513458 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
SREK1IP1-204ENST00000513458 CARD11Q9BXL7 1154 aa8.58□□□□□ -1.04
SREK1IP1-204ENST00000513458 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
SREK1IP1-204ENST00000513458 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
SREK1IP1-204ENST00000513458 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
SREK1IP1-204ENST00000513458 HNRNPMP52272 730 aaKnown RBP eCLIP8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 KANK1Q14678 1352 aa8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 FOXD1Q16676 465 aa8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
SREK1IP1-204ENST00000513458 PKD2Q13563 968 aa8.55□□□□□ -1.04
SREK1IP1-204ENST00000513458 PRXQ9BXM0 1461 aa8.55□□□□□ -1.04
SREK1IP1-204ENST00000513458 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
SREK1IP1-204ENST00000513458 IFT140Q96RY7 1462 aa8.55□□□□□ -1.04
SREK1IP1-204ENST00000513458 MPHOSPH9Q99550 1183 aa8.55□□□□□ -1.04
SREK1IP1-204ENST00000513458 TRHP20396 242 aaPredicted RBP8.54□□□□□ -1.04
SREK1IP1-204ENST00000513458 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
SREK1IP1-204ENST00000513458 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
SREK1IP1-204ENST00000513458 NUP155O75694 1391 aa8.53□□□□□ -1.04
SREK1IP1-204ENST00000513458 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
SREK1IP1-204ENST00000513458 GGT6Q6P531 493 aa8.53□□□□□ -1.04
SREK1IP1-204ENST00000513458 ARAP1Q96P48 1450 aa8.52□□□□□ -1.05
SREK1IP1-204ENST00000513458 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
SREK1IP1-204ENST00000513458 MLECQ14165 292 aa8.51□□□□□ -1.05
SREK1IP1-204ENST00000513458 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
SREK1IP1-204ENST00000513458 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
SREK1IP1-204ENST00000513458 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
SREK1IP1-204ENST00000513458 LRRC9Q6ZRR7 1453 aa8.5□□□□□ -1.05
SREK1IP1-204ENST00000513458 FKBP8Q14318 412 aa8.5□□□□□ -1.05
SREK1IP1-204ENST00000513458 ABCA10Q8WWZ4 1543 aa8.5□□□□□ -1.05
SREK1IP1-204ENST00000513458 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
SREK1IP1-204ENST00000513458 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
SREK1IP1-204ENST00000513458 KIF3BO15066 747 aa8.49□□□□□ -1.05
SREK1IP1-204ENST00000513458 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
SREK1IP1-204ENST00000513458 EFCAB5A4FU69 1503 aa8.48□□□□□ -1.05
SREK1IP1-204ENST00000513458 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
SREK1IP1-204ENST00000513458 BIVM-ERCC5R4GMW8 1640 aa8.48□□□□□ -1.05
SREK1IP1-204ENST00000513458 FYCO1Q9BQS8 1478 aa8.47□□□□□ -1.05
SREK1IP1-204ENST00000513458 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.05
SREK1IP1-204ENST00000513458 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.05
SREK1IP1-204ENST00000513458 POGKQ9P215 609 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms