RNA–Protein interactions for RNA: ENST00000513283.1

AC016553.1-201, humanhuman

TSL 3 BASIC

Gene AC016553.1, Length 249 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016553.1-201ENST00000513283 ATAD2BQ9ULI0 1458 aa7.12□□□□□ -1.27
AC016553.1-201ENST00000513283 NCAPD3P42695 1498 aa7.11□□□□□ -1.27
AC016553.1-201ENST00000513283 BAZ1BQ9UIG0 1483 aaKnown RBP7.11□□□□□ -1.27
AC016553.1-201ENST00000513283 NESP48681 1621 aa7.11□□□□□ -1.27
AC016553.1-201ENST00000513283 SMARCA2P51531 1590 aa7.11□□□□□ -1.27
AC016553.1-201ENST00000513283 SMARCA4P51532 1647 aa7.09□□□□□ -1.27
AC016553.1-201ENST00000513283 TRIM41Q8WV44 630 aa7.08□□□□□ -1.28
AC016553.1-201ENST00000513283 ZNF579Q8NAF0 562 aaKnown RBP7.07□□□□□ -1.28
AC016553.1-201ENST00000513283 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
AC016553.1-201ENST00000513283 BAZ1AQ9NRL2 1556 aaPredicted RBP7.06□□□□□ -1.28
AC016553.1-201ENST00000513283 SPDYE2BA6NHP3 402 aa7.03□□□□□ -1.28
AC016553.1-201ENST00000513283 SPDYE6P0CI01 402 aa7.03□□□□□ -1.28
AC016553.1-201ENST00000513283 SPDYE2Q495Y8 402 aa7.03□□□□□ -1.28
AC016553.1-201ENST00000513283 GALR2O43603 387 aaPredicted RBP7.02□□□□□ -1.29
AC016553.1-201ENST00000513283 METRNQ9UJH8 293 aa7.02□□□□□ -1.29
AC016553.1-201ENST00000513283 PDS5BQ9NTI5 1447 aa7.01□□□□□ -1.29
AC016553.1-201ENST00000513283 POTEJP0CG39 1038 aa7.01□□□□□ -1.29
AC016553.1-201ENST00000513283 MROH2BQ7Z745 1585 aa6.99□□□□□ -1.29
AC016553.1-201ENST00000513283 THOC2Q8NI27 1593 aaKnown RBP6.99□□□□□ -1.29
AC016553.1-201ENST00000513283 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
AC016553.1-201ENST00000513283 C7P10643 843 aa6.99□□□□□ -1.29
AC016553.1-201ENST00000513283 KIF21AQ7Z4S6 1674 aa6.98□□□□□ -1.29
AC016553.1-201ENST00000513283 ZBTB22O15209 634 aa6.98□□□□□ -1.29
AC016553.1-201ENST00000513283 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
AC016553.1-201ENST00000513283 PRR29P0C7W0 189 aa6.97□□□□□ -1.29
AC016553.1-201ENST00000513283 FARP1Q9Y4F1 1045 aaPredicted RBP6.97□□□□□ -1.29
AC016553.1-201ENST00000513283 ZRANB1Q9UGI0 708 aa6.96□□□□□ -1.3
AC016553.1-201ENST00000513283 MRC2Q9UBG0 1479 aa6.95□□□□□ -1.3
AC016553.1-201ENST00000513283 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
AC016553.1-201ENST00000513283 CADPSQ9ULU8 1353 aa6.95□□□□□ -1.3
AC016553.1-201ENST00000513283 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
AC016553.1-201ENST00000513283 CEP164Q9UPV0 1460 aa6.93□□□□□ -1.3
AC016553.1-201ENST00000513283 ATXN8OSP0DMR3 200 aa6.93□□□□□ -1.3
AC016553.1-201ENST00000513283 WIZO95785 1651 aa6.93□□□□□ -1.3
AC016553.1-201ENST00000513283 ATF5Q9Y2D1 282 aaPredicted RBP6.92□□□□□ -1.3
AC016553.1-201ENST00000513283 FANCD2Q9BXW9 1451 aa6.9□□□□□ -1.31
AC016553.1-201ENST00000513283 WDR62O43379 1518 aa6.89□□□□□ -1.31
AC016553.1-201ENST00000513283 ST18O60284 1047 aa6.87□□□□□ -1.31
AC016553.1-201ENST00000513283 FBLN2P98095 1184 aa6.83□□□□□ -1.32
AC016553.1-201ENST00000513283 CFTRP13569 1480 aa6.82□□□□□ -1.32
AC016553.1-201ENST00000513283 ASTLQ6HA08 431 aaPredicted RBP6.82□□□□□ -1.32
AC016553.1-201ENST00000513283 RSF1Q96T23 1441 aaPredicted RBP6.82□□□□□ -1.32
AC016553.1-201ENST00000513283 TOP2AP11388 1531 aaKnown RBP6.81□□□□□ -1.32
AC016553.1-201ENST00000513283 URB2Q14146 1524 aaKnown RBP6.81□□□□□ -1.32
AC016553.1-201ENST00000513283 TMEM121BQ9BXQ6 578 aaPredicted RBP6.8□□□□□ -1.32
AC016553.1-201ENST00000513283 CSRNP3Q8WYN3 585 aa6.79□□□□□ -1.32
AC016553.1-201ENST00000513283 PAK3O75914 559 aaPredicted RBP6.77□□□□□ -1.33
AC016553.1-201ENST00000513283 CYB5RLQ6IPT4 315 aa6.77□□□□□ -1.33
AC016553.1-201ENST00000513283 ZNF608Q9ULD9 1512 aaPredicted RBP6.76□□□□□ -1.33
AC016553.1-201ENST00000513283 ATMINO43313 823 aaPredicted RBP6.76□□□□□ -1.33
AC016553.1-201ENST00000513283 IFT140Q96RY7 1462 aa6.76□□□□□ -1.33
AC016553.1-201ENST00000513283 CCDC88BA6NC98 1476 aa6.75□□□□□ -1.33
AC016553.1-201ENST00000513283 EHMT2Q96KQ7 1210 aa6.75□□□□□ -1.33
AC016553.1-201ENST00000513283 RIMBP3CA6NJZ7 1639 aa6.75□□□□□ -1.33
AC016553.1-201ENST00000513283 RIMBP3BA6NNM3 1639 aa6.75□□□□□ -1.33
AC016553.1-201ENST00000513283 RIMBP3Q9UFD9 1639 aa6.75□□□□□ -1.33
AC016553.1-201ENST00000513283 ZNF692Q9BU19 519 aaPredicted RBP6.74□□□□□ -1.33
AC016553.1-201ENST00000513283 ARHGEF11O15085 1522 aa6.73□□□□□ -1.33
AC016553.1-201ENST00000513283 TOPBP1Q92547 1522 aa6.73□□□□□ -1.33
AC016553.1-201ENST00000513283 AQRO60306 1485 aaKnown RBP eCLIP6.73□□□□□ -1.33
AC016553.1-201ENST00000513283 SSUH2Q9Y2M2 353 aa6.72□□□□□ -1.33
AC016553.1-201ENST00000513283 EIF4G3O43432 1585 aaKnown RBP6.72□□□□□ -1.33
AC016553.1-201ENST00000513283 PRDM2Q13029 1718 aa6.71□□□□□ -1.34
AC016553.1-201ENST00000513283 CHMP7Q8WUX9 453 aaPredicted RBP6.7□□□□□ -1.34
AC016553.1-201ENST00000513283 PHF12Q96QT6 1004 aa6.7□□□□□ -1.34
AC016553.1-201ENST00000513283 ABCC8Q09428 1581 aa6.69□□□□□ -1.34
AC016553.1-201ENST00000513283 DNMBPQ6XZF7 1577 aa6.69□□□□□ -1.34
AC016553.1-201ENST00000513283 TDRD9Q8NDG6 1382 aaKnown RBP6.69□□□□□ -1.34
AC016553.1-201ENST00000513283 RAD54L2Q9Y4B4 1467 aa6.68□□□□□ -1.34
AC016553.1-201ENST00000513283 CHD1O14646 1710 aa6.67□□□□□ -1.34
AC016553.1-201ENST00000513283 SLAIN1Q8ND83 568 aa6.67□□□□□ -1.34
AC016553.1-201ENST00000513283 SOGA1O94964 1423 aa6.67□□□□□ -1.34
AC016553.1-201ENST00000513283 POLA1P09884 1462 aaPredicted RBP6.66□□□□□ -1.34
AC016553.1-201ENST00000513283 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
AC016553.1-201ENST00000513283 SNAPC4Q5SXM2 1469 aa6.66□□□□□ -1.34
AC016553.1-201ENST00000513283 ARAP1Q96P48 1450 aa6.65□□□□□ -1.35
AC016553.1-201ENST00000513283 RNF166Q96A37 237 aaPredicted RBP6.64□□□□□ -1.35
AC016553.1-201ENST00000513283 FGD5Q6ZNL6 1462 aa6.64□□□□□ -1.35
AC016553.1-201ENST00000513283 TARBP1Q13395 1621 aaKnown RBP6.63□□□□□ -1.35
AC016553.1-201ENST00000513283 MARVELD3Q96A59 401 aa6.63□□□□□ -1.35
AC016553.1-201ENST00000513283 SNPHO15079 494 aa6.62□□□□□ -1.35
AC016553.1-201ENST00000513283 SYNJ1O43426 1573 aa6.61□□□□□ -1.35
AC016553.1-201ENST00000513283 MKRN4PQ13434 485 aaPredicted RBP6.61□□□□□ -1.35
AC016553.1-201ENST00000513283 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
AC016553.1-201ENST00000513283 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
AC016553.1-201ENST00000513283 GRIN2BQ13224 1484 aa6.6□□□□□ -1.35
AC016553.1-201ENST00000513283 POTEFA5A3E0 1075 aa6.59□□□□□ -1.35
AC016553.1-201ENST00000513283 SEC24BO95487 1268 aa6.59□□□□□ -1.35
AC016553.1-201ENST00000513283 MAGI1Q96QZ7 1491 aaPredicted RBP6.59□□□□□ -1.36
AC016553.1-201ENST00000513283 ATN1P54259 1190 aaPredicted RBP6.58□□□□□ -1.36
AC016553.1-201ENST00000513283 MS4A3Q96HJ5 214 aa6.58□□□□□ -1.36
AC016553.1-201ENST00000513283 CUX1P39880 1505 aa6.58□□□□□ -1.36
AC016553.1-201ENST00000513283 SYNJ2O15056 1496 aa6.58□□□□□ -1.36
AC016553.1-201ENST00000513283 GAPVD1Q14C86 1478 aa6.58□□□□□ -1.36
AC016553.1-201ENST00000513283 CLASP1Q7Z460 1538 aa6.55□□□□□ -1.36
AC016553.1-201ENST00000513283 EMP3P54852 163 aa6.55□□□□□ -1.36
AC016553.1-201ENST00000513283 PBRM1Q86U86 1689 aa6.55□□□□□ -1.36
AC016553.1-201ENST00000513283 TTBK1Q5TCY1 1321 aaPredicted RBP6.54□□□□□ -1.36
AC016553.1-201ENST00000513283 WDR97A6NE52 1622 aa6.54□□□□□ -1.36
AC016553.1-201ENST00000513283 WRNQ14191 1432 aaPredicted RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms