RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 KIAA0586Q9BVV6 1533 aa27.14■■□□□ 1.93
HMGCL-209ENST00000513148 KIF21BO75037 1637 aa27.14■■□□□ 1.93
HMGCL-209ENST00000513148 RIMBP3CA6NJZ7 1639 aa27.13■■□□□ 1.93
HMGCL-209ENST00000513148 RIMBP3BA6NNM3 1639 aa27.13■■□□□ 1.93
HMGCL-209ENST00000513148 RIMBP3Q9UFD9 1639 aa27.13■■□□□ 1.93
HMGCL-209ENST00000513148 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
HMGCL-209ENST00000513148 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
HMGCL-209ENST00000513148 IQGAP2Q13576 1575 aa27.09■■□□□ 1.93
HMGCL-209ENST00000513148 JPH4Q96JJ6 628 aa27.06■■□□□ 1.92
HMGCL-209ENST00000513148 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
HMGCL-209ENST00000513148 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
HMGCL-209ENST00000513148 GOLGA3Q08378 1498 aa27■■□□□ 1.91
HMGCL-209ENST00000513148 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
HMGCL-209ENST00000513148 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
HMGCL-209ENST00000513148 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
HMGCL-209ENST00000513148 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
HMGCL-209ENST00000513148 CYB5RLQ6IPT4 315 aa26.88■■□□□ 1.89
HMGCL-209ENST00000513148 DISP1Q96F81 1524 aa26.85■■□□□ 1.89
HMGCL-209ENST00000513148 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
HMGCL-209ENST00000513148 KIAA0556O60303 1618 aa26.83■■□□□ 1.89
HMGCL-209ENST00000513148 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
HMGCL-209ENST00000513148 TNIKQ9UKE5 1360 aa26.74■■□□□ 1.87
HMGCL-209ENST00000513148 P3H3Q8IVL6 736 aa26.73■■□□□ 1.87
HMGCL-209ENST00000513148 SAMD9Q5K651 1589 aa26.73■■□□□ 1.87
HMGCL-209ENST00000513148 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
HMGCL-209ENST00000513148 PTPRGP23470 1445 aa26.7■■□□□ 1.87
HMGCL-209ENST00000513148 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
HMGCL-209ENST00000513148 FHOD3Q2V2M9 1422 aa26.63■■□□□ 1.85
HMGCL-209ENST00000513148 ADCY10Q96PN6 1610 aa26.59■■□□□ 1.85
HMGCL-209ENST00000513148 ARHGAP35Q9NRY4 1499 aa26.59■■□□□ 1.85
HMGCL-209ENST00000513148 PLB1Q6P1J6 1458 aa26.54■■□□□ 1.84
HMGCL-209ENST00000513148 CLIP1P30622 1438 aa26.53■■□□□ 1.84
HMGCL-209ENST00000513148 UACAQ9BZF9 1416 aa26.53■■□□□ 1.84
HMGCL-209ENST00000513148 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
HMGCL-209ENST00000513148 ABCC2Q92887 1545 aa26.5■■□□□ 1.83
HMGCL-209ENST00000513148 ABCA8O94911 1581 aa26.48■■□□□ 1.83
HMGCL-209ENST00000513148 UHRF1BP1LA0JNW5 1464 aa26.46■■□□□ 1.83
HMGCL-209ENST00000513148 RAPGEF6Q8TEU7 1601 aa26.44■■□□□ 1.82
HMGCL-209ENST00000513148 NPM1P06748 294 aaKnown RBP eCLIP26.43■■□□□ 1.82
HMGCL-209ENST00000513148 ARID3CA6NKF2 412 aa26.39■■□□□ 1.82
HMGCL-209ENST00000513148 FMN1Q68DA7 1419 aa26.39■■□□□ 1.82
HMGCL-209ENST00000513148 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
HMGCL-209ENST00000513148 KDM5BQ9UGL1 1544 aa26.36■■□□□ 1.81
HMGCL-209ENST00000513148 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.8
HMGCL-209ENST00000513148 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
HMGCL-209ENST00000513148 PCF11O94913 1555 aaKnown RBP26.31■■□□□ 1.8
HMGCL-209ENST00000513148 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
HMGCL-209ENST00000513148 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
HMGCL-209ENST00000513148 ATP10BO94823 1461 aa26.27■■□□□ 1.8
HMGCL-209ENST00000513148 TRHP20396 242 aaPredicted RBP26.26■■□□□ 1.79
HMGCL-209ENST00000513148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
HMGCL-209ENST00000513148 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
HMGCL-209ENST00000513148 ASXL2Q76L83 1435 aa26.25■■□□□ 1.79
HMGCL-209ENST00000513148 CDK13Q14004 1512 aaKnown RBP26.22■■□□□ 1.79
HMGCL-209ENST00000513148 CASKIN1Q8WXD9 1431 aa26.22■■□□□ 1.79
HMGCL-209ENST00000513148 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
HMGCL-209ENST00000513148 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.78
HMGCL-209ENST00000513148 EPRSP07814 1512 aaKnown RBP26.18■■□□□ 1.78
HMGCL-209ENST00000513148 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
HMGCL-209ENST00000513148 WDR7Q9Y4E6 1490 aa26.16■■□□□ 1.78
HMGCL-209ENST00000513148 DIP2BQ9P265 1576 aa26.16■■□□□ 1.78
HMGCL-209ENST00000513148 ABCC10Q5T3U5 1492 aa26.15■■□□□ 1.78
HMGCL-209ENST00000513148 VPS8Q8N3P4 1428 aa26.13■■□□□ 1.77
HMGCL-209ENST00000513148 FAM69CQ0P6D2 419 aa26.11■■□□□ 1.77
HMGCL-209ENST00000513148 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
HMGCL-209ENST00000513148 CCDC18Q5T9S5 1454 aa26.1■■□□□ 1.77
HMGCL-209ENST00000513148 PLEKHD1A6NEE1 506 aa26.05■■□□□ 1.76
HMGCL-209ENST00000513148 GLI2P10070 1586 aa26.02■■□□□ 1.76
HMGCL-209ENST00000513148 TSPOAP1O95153 1857 aa26.01■■□□□ 1.75
HMGCL-209ENST00000513148 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
HMGCL-209ENST00000513148 MAGI3Q5TCQ9 1506 aa25.97■■□□□ 1.75
HMGCL-209ENST00000513148 MAP3K4Q9Y6R4 1608 aa25.97■■□□□ 1.75
HMGCL-209ENST00000513148 CFAP43Q8NDM7 1665 aa25.96■■□□□ 1.75
HMGCL-209ENST00000513148 TROQ12816 1431 aaPredicted RBP25.95■■□□□ 1.74
HMGCL-209ENST00000513148 KIF14Q15058 1648 aa25.93■■□□□ 1.74
HMGCL-209ENST00000513148 ABCA9Q8IUA7 1624 aa25.93■■□□□ 1.74
HMGCL-209ENST00000513148 TIAM1Q13009 1591 aa25.92■■□□□ 1.74
HMGCL-209ENST00000513148 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
HMGCL-209ENST00000513148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.9■■□□□ 1.74
HMGCL-209ENST00000513148 PPRC1Q5VV67 1664 aaKnown RBP25.89■■□□□ 1.74
HMGCL-209ENST00000513148 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.73
HMGCL-209ENST00000513148 CD109Q6YHK3 1445 aa25.89■■□□□ 1.73
HMGCL-209ENST00000513148 APLP2Q06481 763 aa25.85■■□□□ 1.73
HMGCL-209ENST00000513148 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
HMGCL-209ENST00000513148 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
HMGCL-209ENST00000513148 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
HMGCL-209ENST00000513148 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
HMGCL-209ENST00000513148 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
HMGCL-209ENST00000513148 KANK4Q5T7N3 995 aaPredicted RBP25.77■■□□□ 1.72
HMGCL-209ENST00000513148 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
HMGCL-209ENST00000513148 CDC42BPAQ5VT25 1732 aa25.72■■□□□ 1.71
HMGCL-209ENST00000513148 PLCH2O75038 1416 aa25.7■■□□□ 1.7
HMGCL-209ENST00000513148 PREX2Q70Z35 1606 aa25.7■■□□□ 1.7
HMGCL-209ENST00000513148 FANCAO15360 1455 aa25.69■■□□□ 1.7
HMGCL-209ENST00000513148 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
HMGCL-209ENST00000513148 NCOA2Q15596 1464 aa25.69■■□□□ 1.7
HMGCL-209ENST00000513148 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
HMGCL-209ENST00000513148 KDM6BO15054 1643 aa25.68■■□□□ 1.7
HMGCL-209ENST00000513148 CCNB3Q8WWL7 1395 aa25.67■■□□□ 1.7
HMGCL-209ENST00000513148 CFAP74Q9C0B2 1584 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms