RNA–Protein interactions for RNA: ENST00000513135.5

TNFRSF25-219, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 5

Gene TNFRSF25, Length 3,483 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-219ENST00000513135 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
TNFRSF25-219ENST00000513135 ZNF777Q9ULD5 760 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF25-219ENST00000513135 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
TNFRSF25-219ENST00000513135 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
TNFRSF25-219ENST00000513135 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF25-219ENST00000513135 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.71
TNFRSF25-219ENST00000513135 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
TNFRSF25-219ENST00000513135 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
TNFRSF25-219ENST00000513135 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
TNFRSF25-219ENST00000513135 CHIC2Q9UKJ5 165 aa19.48■□□□□ 0.71
TNFRSF25-219ENST00000513135 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
TNFRSF25-219ENST00000513135 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
TNFRSF25-219ENST00000513135 CENPBP07199 599 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF25-219ENST00000513135 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
TNFRSF25-219ENST00000513135 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
TNFRSF25-219ENST00000513135 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
TNFRSF25-219ENST00000513135 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
TNFRSF25-219ENST00000513135 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
TNFRSF25-219ENST00000513135 KIF21BO75037 1637 aa19.4■□□□□ 0.7
TNFRSF25-219ENST00000513135 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
TNFRSF25-219ENST00000513135 MTUS2Q5JR59 1369 aa19.4■□□□□ 0.7
TNFRSF25-219ENST00000513135 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
TNFRSF25-219ENST00000513135 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
TNFRSF25-219ENST00000513135 WDR62O43379 1518 aa19.27■□□□□ 0.68
TNFRSF25-219ENST00000513135 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.67
TNFRSF25-219ENST00000513135 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
TNFRSF25-219ENST00000513135 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
TNFRSF25-219ENST00000513135 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
TNFRSF25-219ENST00000513135 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
TNFRSF25-219ENST00000513135 TRIM52Q96A61 297 aa19.23■□□□□ 0.67
TNFRSF25-219ENST00000513135 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 PLEKHD1A6NEE1 506 aa19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF25-219ENST00000513135 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF25-219ENST00000513135 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
TNFRSF25-219ENST00000513135 ZNF644Q9H582 1327 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF25-219ENST00000513135 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
TNFRSF25-219ENST00000513135 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
TNFRSF25-219ENST00000513135 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
TNFRSF25-219ENST00000513135 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
TNFRSF25-219ENST00000513135 PLB1Q6P1J6 1458 aa19.11■□□□□ 0.65
TNFRSF25-219ENST00000513135 PTPRGP23470 1445 aa19.11■□□□□ 0.65
TNFRSF25-219ENST00000513135 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF25-219ENST00000513135 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
TNFRSF25-219ENST00000513135 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
TNFRSF25-219ENST00000513135 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
TNFRSF25-219ENST00000513135 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
TNFRSF25-219ENST00000513135 CUL7Q14999 1698 aa19.07■□□□□ 0.64
TNFRSF25-219ENST00000513135 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
TNFRSF25-219ENST00000513135 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
TNFRSF25-219ENST00000513135 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
TNFRSF25-219ENST00000513135 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF25-219ENST00000513135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
TNFRSF25-219ENST00000513135 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF25-219ENST00000513135 KIAA0586Q9BVV6 1533 aa19.03■□□□□ 0.64
TNFRSF25-219ENST00000513135 PCF11O94913 1555 aaKnown RBP19.03■□□□□ 0.64
TNFRSF25-219ENST00000513135 FOXD1Q16676 465 aa19.02■□□□□ 0.63
TNFRSF25-219ENST00000513135 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
TNFRSF25-219ENST00000513135 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
TNFRSF25-219ENST00000513135 WDR97A6NE52 1622 aa18.97■□□□□ 0.63
TNFRSF25-219ENST00000513135 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
TNFRSF25-219ENST00000513135 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF25-219ENST00000513135 HIRIP3Q9BW71 556 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF25-219ENST00000513135 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
TNFRSF25-219ENST00000513135 CEP170Q5SW79 1584 aa18.95■□□□□ 0.62
TNFRSF25-219ENST00000513135 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
TNFRSF25-219ENST00000513135 CASKIN1Q8WXD9 1431 aa18.94■□□□□ 0.62
TNFRSF25-219ENST00000513135 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.62
TNFRSF25-219ENST00000513135 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
TNFRSF25-219ENST00000513135 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
TNFRSF25-219ENST00000513135 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
TNFRSF25-219ENST00000513135 DISP1Q96F81 1524 aa18.87■□□□□ 0.61
TNFRSF25-219ENST00000513135 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
TNFRSF25-219ENST00000513135 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF25-219ENST00000513135 EPRSP07814 1512 aaKnown RBP18.85■□□□□ 0.61
TNFRSF25-219ENST00000513135 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
TNFRSF25-219ENST00000513135 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.61
TNFRSF25-219ENST00000513135 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.61
TNFRSF25-219ENST00000513135 FYCO1Q9BQS8 1478 aa18.83■□□□□ 0.61
TNFRSF25-219ENST00000513135 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
TNFRSF25-219ENST00000513135 CHD1O14646 1710 aa18.82■□□□□ 0.6
TNFRSF25-219ENST00000513135 NUP160Q12769 1436 aa18.81■□□□□ 0.6
TNFRSF25-219ENST00000513135 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
TNFRSF25-219ENST00000513135 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
TNFRSF25-219ENST00000513135 AFAP1Q8N556 730 aa18.77■□□□□ 0.59
TNFRSF25-219ENST00000513135 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
TNFRSF25-219ENST00000513135 KIAA0556O60303 1618 aa18.76■□□□□ 0.59
TNFRSF25-219ENST00000513135 CCDC18Q5T9S5 1454 aa18.75■□□□□ 0.59
TNFRSF25-219ENST00000513135 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
TNFRSF25-219ENST00000513135 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
TNFRSF25-219ENST00000513135 MLECQ14165 292 aa18.71■□□□□ 0.59
TNFRSF25-219ENST00000513135 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
TNFRSF25-219ENST00000513135 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
TNFRSF25-219ENST00000513135 MYOM3Q5VTT5 1437 aa18.71■□□□□ 0.59
TNFRSF25-219ENST00000513135 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
TNFRSF25-219ENST00000513135 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
TNFRSF25-219ENST00000513135 ATP10BO94823 1461 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms