RNA–Protein interactions for RNA: ENST00000513044.1

RBM47-210, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-210ENST00000513044 CUL7Q14999 1698 aa13.17□□□□□ -0.3
RBM47-210ENST00000513044 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
RBM47-210ENST00000513044 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.31
RBM47-210ENST00000513044 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
RBM47-210ENST00000513044 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
RBM47-210ENST00000513044 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
RBM47-210ENST00000513044 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
RBM47-210ENST00000513044 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
RBM47-210ENST00000513044 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
RBM47-210ENST00000513044 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
RBM47-210ENST00000513044 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
RBM47-210ENST00000513044 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
RBM47-210ENST00000513044 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
RBM47-210ENST00000513044 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.32
RBM47-210ENST00000513044 CLIP1P30622 1438 aa13.01□□□□□ -0.33
RBM47-210ENST00000513044 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
RBM47-210ENST00000513044 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
RBM47-210ENST00000513044 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.33
RBM47-210ENST00000513044 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
RBM47-210ENST00000513044 NUP160Q12769 1436 aa12.92□□□□□ -0.34
RBM47-210ENST00000513044 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
RBM47-210ENST00000513044 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
RBM47-210ENST00000513044 KIAA0586Q9BVV6 1533 aa12.92□□□□□ -0.34
RBM47-210ENST00000513044 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
RBM47-210ENST00000513044 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
RBM47-210ENST00000513044 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
RBM47-210ENST00000513044 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
RBM47-210ENST00000513044 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
RBM47-210ENST00000513044 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
RBM47-210ENST00000513044 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
RBM47-210ENST00000513044 CHD1O14646 1710 aa12.81□□□□□ -0.36
RBM47-210ENST00000513044 FBLN2P98095 1184 aa12.8□□□□□ -0.36
RBM47-210ENST00000513044 DISP1Q96F81 1524 aa12.8□□□□□ -0.36
RBM47-210ENST00000513044 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
RBM47-210ENST00000513044 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
RBM47-210ENST00000513044 MAP3K1Q13233 1512 aa12.77□□□□□ -0.36
RBM47-210ENST00000513044 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
RBM47-210ENST00000513044 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
RBM47-210ENST00000513044 CASKIN1Q8WXD9 1431 aa12.76□□□□□ -0.37
RBM47-210ENST00000513044 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
RBM47-210ENST00000513044 CLASP1Q7Z460 1538 aa12.75□□□□□ -0.37
RBM47-210ENST00000513044 FYCO1Q9BQS8 1478 aa12.74□□□□□ -0.37
RBM47-210ENST00000513044 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
RBM47-210ENST00000513044 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
RBM47-210ENST00000513044 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
RBM47-210ENST00000513044 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
RBM47-210ENST00000513044 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
RBM47-210ENST00000513044 APLP2Q06481 763 aa12.68□□□□□ -0.38
RBM47-210ENST00000513044 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
RBM47-210ENST00000513044 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
RBM47-210ENST00000513044 FKBP8Q14318 412 aa12.68□□□□□ -0.38
RBM47-210ENST00000513044 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
RBM47-210ENST00000513044 CFAP43Q8NDM7 1665 aa12.66□□□□□ -0.38
RBM47-210ENST00000513044 KANK4Q5T7N3 995 aaPredicted RBP12.64□□□□□ -0.39
RBM47-210ENST00000513044 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
RBM47-210ENST00000513044 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
RBM47-210ENST00000513044 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
RBM47-210ENST00000513044 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
RBM47-210ENST00000513044 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
RBM47-210ENST00000513044 ABCA8O94911 1581 aa12.61□□□□□ -0.39
RBM47-210ENST00000513044 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
RBM47-210ENST00000513044 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
RBM47-210ENST00000513044 LRRIQ1Q96JM4 1722 aa12.61□□□□□ -0.39
RBM47-210ENST00000513044 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
RBM47-210ENST00000513044 MYT1Q01538 1121 aa12.6□□□□□ -0.39
RBM47-210ENST00000513044 PTPRGP23470 1445 aa12.6□□□□□ -0.39
RBM47-210ENST00000513044 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
RBM47-210ENST00000513044 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
RBM47-210ENST00000513044 PCGF6Q9BYE7 350 aa12.57□□□□□ -0.4
RBM47-210ENST00000513044 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
RBM47-210ENST00000513044 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
RBM47-210ENST00000513044 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
RBM47-210ENST00000513044 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
RBM47-210ENST00000513044 UACAQ9BZF9 1416 aa12.55□□□□□ -0.4
RBM47-210ENST00000513044 ATP1B4Q9UN42 357 aaPredicted RBP12.55□□□□□ -0.4
RBM47-210ENST00000513044 MAGI3Q5TCQ9 1506 aa12.54□□□□□ -0.4
RBM47-210ENST00000513044 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
RBM47-210ENST00000513044 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
RBM47-210ENST00000513044 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
RBM47-210ENST00000513044 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
RBM47-210ENST00000513044 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
RBM47-210ENST00000513044 ATP10BO94823 1461 aa12.51□□□□□ -0.41
RBM47-210ENST00000513044 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
RBM47-210ENST00000513044 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
RBM47-210ENST00000513044 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
RBM47-210ENST00000513044 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
RBM47-210ENST00000513044 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
RBM47-210ENST00000513044 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
RBM47-210ENST00000513044 SUPT6HQ7KZ85 1726 aaKnown RBP12.48□□□□□ -0.41
RBM47-210ENST00000513044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
RBM47-210ENST00000513044 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
RBM47-210ENST00000513044 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
RBM47-210ENST00000513044 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
RBM47-210ENST00000513044 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
RBM47-210ENST00000513044 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
RBM47-210ENST00000513044 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
RBM47-210ENST00000513044 PLEKHD1A6NEE1 506 aa12.42□□□□□ -0.42
RBM47-210ENST00000513044 MIA2Q96PC5 1412 aa12.42□□□□□ -0.42
RBM47-210ENST00000513044 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
RBM47-210ENST00000513044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms