RNA–Protein interactions for RNA: ENST00000512212.1

CD164-209, Transcript of CD164 molecule, humanhuman

TSL 2

Gene CD164, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-209ENST00000512212 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
CD164-209ENST00000512212 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
CD164-209ENST00000512212 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
CD164-209ENST00000512212 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
CD164-209ENST00000512212 KIAA0586Q9BVV6 1533 aa23.5■■□□□ 1.35
CD164-209ENST00000512212 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
CD164-209ENST00000512212 GOLGA3Q08378 1498 aa23.47■■□□□ 1.35
CD164-209ENST00000512212 IQGAP2Q13576 1575 aa23.45■■□□□ 1.34
CD164-209ENST00000512212 JPH4Q96JJ6 628 aa23.45■■□□□ 1.34
CD164-209ENST00000512212 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
CD164-209ENST00000512212 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
CD164-209ENST00000512212 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
CD164-209ENST00000512212 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
CD164-209ENST00000512212 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
CD164-209ENST00000512212 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
CD164-209ENST00000512212 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
CD164-209ENST00000512212 DISP1Q96F81 1524 aa23.35■■□□□ 1.33
CD164-209ENST00000512212 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
CD164-209ENST00000512212 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
CD164-209ENST00000512212 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
CD164-209ENST00000512212 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
CD164-209ENST00000512212 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
CD164-209ENST00000512212 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
CD164-209ENST00000512212 SAMD9Q5K651 1589 aa23.23■■□□□ 1.31
CD164-209ENST00000512212 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
CD164-209ENST00000512212 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
CD164-209ENST00000512212 FHOD3Q2V2M9 1422 aa23.18■■□□□ 1.3
CD164-209ENST00000512212 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
CD164-209ENST00000512212 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
CD164-209ENST00000512212 PTPRGP23470 1445 aa23.11■■□□□ 1.29
CD164-209ENST00000512212 CLIP1P30622 1438 aa23.1■■□□□ 1.29
CD164-209ENST00000512212 EFCAB5A4FU69 1503 aa23.07■■□□□ 1.28
CD164-209ENST00000512212 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
CD164-209ENST00000512212 ADCY10Q96PN6 1610 aa23.06■■□□□ 1.28
CD164-209ENST00000512212 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
CD164-209ENST00000512212 ABCA8O94911 1581 aa23■■□□□ 1.27
CD164-209ENST00000512212 UACAQ9BZF9 1416 aa22.96■■□□□ 1.27
CD164-209ENST00000512212 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
CD164-209ENST00000512212 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
CD164-209ENST00000512212 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
CD164-209ENST00000512212 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
CD164-209ENST00000512212 NUP153P49790 1475 aaKnown RBP22.89■■□□□ 1.25
CD164-209ENST00000512212 UHRF1BP1LA0JNW5 1464 aa22.88■■□□□ 1.25
CD164-209ENST00000512212 ZCCHC11Q5TAX3 1644 aaKnown RBP22.86■■□□□ 1.25
CD164-209ENST00000512212 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
CD164-209ENST00000512212 CDK13Q14004 1512 aaKnown RBP22.84■■□□□ 1.25
CD164-209ENST00000512212 ATP10BO94823 1461 aa22.84■■□□□ 1.25
CD164-209ENST00000512212 FMN1Q68DA7 1419 aa22.82■■□□□ 1.24
CD164-209ENST00000512212 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
CD164-209ENST00000512212 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
CD164-209ENST00000512212 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
CD164-209ENST00000512212 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
CD164-209ENST00000512212 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
CD164-209ENST00000512212 ASXL2Q76L83 1435 aa22.72■■□□□ 1.23
CD164-209ENST00000512212 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
CD164-209ENST00000512212 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
CD164-209ENST00000512212 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
CD164-209ENST00000512212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
CD164-209ENST00000512212 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
CD164-209ENST00000512212 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
CD164-209ENST00000512212 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
CD164-209ENST00000512212 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
CD164-209ENST00000512212 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
CD164-209ENST00000512212 DIP2BQ9P265 1576 aa22.6■■□□□ 1.21
CD164-209ENST00000512212 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
CD164-209ENST00000512212 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
CD164-209ENST00000512212 KIF14Q15058 1648 aa22.59■■□□□ 1.21
CD164-209ENST00000512212 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
CD164-209ENST00000512212 ABCC10Q5T3U5 1492 aa22.57■■□□□ 1.2
CD164-209ENST00000512212 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
CD164-209ENST00000512212 TSPOAP1O95153 1857 aa22.57■■□□□ 1.2
CD164-209ENST00000512212 PPARGC1BQ86YN6 1023 aaKnown RBP22.56■■□□□ 1.2
CD164-209ENST00000512212 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
CD164-209ENST00000512212 FAM69CQ0P6D2 419 aa22.55■■□□□ 1.2
CD164-209ENST00000512212 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
CD164-209ENST00000512212 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
CD164-209ENST00000512212 TROQ12816 1431 aaPredicted RBP22.5■■□□□ 1.19
CD164-209ENST00000512212 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
CD164-209ENST00000512212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.192e-6■■□□□ 12.7
CD164-209ENST00000512212 GLI2P10070 1586 aa22.46■■□□□ 1.19
CD164-209ENST00000512212 LRRC9Q6ZRR7 1453 aa22.46■■□□□ 1.19
CD164-209ENST00000512212 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
CD164-209ENST00000512212 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
CD164-209ENST00000512212 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
CD164-209ENST00000512212 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
CD164-209ENST00000512212 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
CD164-209ENST00000512212 EHBP1L1Q8N3D4 1523 aa22.4■■□□□ 1.18
CD164-209ENST00000512212 CDC42BPAQ5VT25 1732 aa22.38■■□□□ 1.17
CD164-209ENST00000512212 CD109Q6YHK3 1445 aa22.37■■□□□ 1.17
CD164-209ENST00000512212 CDC42BPBQ9Y5S2 1711 aa22.37■■□□□ 1.17
CD164-209ENST00000512212 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
CD164-209ENST00000512212 APLP2Q06481 763 aa22.34■■□□□ 1.17
CD164-209ENST00000512212 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
CD164-209ENST00000512212 MYO5CQ9NQX4 1742 aa22.34■■□□□ 1.17
CD164-209ENST00000512212 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
CD164-209ENST00000512212 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
CD164-209ENST00000512212 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
CD164-209ENST00000512212 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
CD164-209ENST00000512212 PLCH2O75038 1416 aa22.27■■□□□ 1.16
CD164-209ENST00000512212 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms