RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-238ENST00000512107 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
MATR3-238ENST00000512107 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
MATR3-238ENST00000512107 GOLGA3Q08378 1498 aa23.98■■□□□ 1.43
MATR3-238ENST00000512107 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
MATR3-238ENST00000512107 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
MATR3-238ENST00000512107 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
MATR3-238ENST00000512107 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
MATR3-238ENST00000512107 JPH4Q96JJ6 628 aa23.9■■□□□ 1.42
MATR3-238ENST00000512107 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
MATR3-238ENST00000512107 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
MATR3-238ENST00000512107 RIMBP3CA6NJZ7 1639 aa23.85■■□□□ 1.41
MATR3-238ENST00000512107 RIMBP3BA6NNM3 1639 aa23.85■■□□□ 1.41
MATR3-238ENST00000512107 RIMBP3Q9UFD9 1639 aa23.85■■□□□ 1.41
MATR3-238ENST00000512107 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
MATR3-238ENST00000512107 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
MATR3-238ENST00000512107 DISP1Q96F81 1524 aa23.83■■□□□ 1.41
MATR3-238ENST00000512107 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
MATR3-238ENST00000512107 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
MATR3-238ENST00000512107 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
MATR3-238ENST00000512107 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
MATR3-238ENST00000512107 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
MATR3-238ENST00000512107 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
MATR3-238ENST00000512107 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
MATR3-238ENST00000512107 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
MATR3-238ENST00000512107 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
MATR3-238ENST00000512107 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
MATR3-238ENST00000512107 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
MATR3-238ENST00000512107 EFCAB5A4FU69 1503 aa23.59■■□□□ 1.37
MATR3-238ENST00000512107 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
MATR3-238ENST00000512107 CLIP1P30622 1438 aa23.58■■□□□ 1.36
MATR3-238ENST00000512107 PTPRGP23470 1445 aa23.56■■□□□ 1.36
MATR3-238ENST00000512107 PLB1Q6P1J6 1458 aa23.5■■□□□ 1.35
MATR3-238ENST00000512107 ADCY10Q96PN6 1610 aa23.49■■□□□ 1.35
MATR3-238ENST00000512107 ABCA8O94911 1581 aa23.48■■□□□ 1.35
MATR3-238ENST00000512107 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
MATR3-238ENST00000512107 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
MATR3-238ENST00000512107 ABCC2Q92887 1545 aa23.4■■□□□ 1.34
MATR3-238ENST00000512107 RAPGEF6Q8TEU7 1601 aa23.4■■□□□ 1.34
MATR3-238ENST00000512107 UHRF1BP1LA0JNW5 1464 aa23.39■■□□□ 1.34
MATR3-238ENST00000512107 PCF11O94913 1555 aaKnown RBP23.37■■□□□ 1.33
MATR3-238ENST00000512107 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
MATR3-238ENST00000512107 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
MATR3-238ENST00000512107 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
MATR3-238ENST00000512107 FMN1Q68DA7 1419 aa23.33■■□□□ 1.33
MATR3-238ENST00000512107 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
MATR3-238ENST00000512107 KDM5BQ9UGL1 1544 aa23.3■■□□□ 1.32
MATR3-238ENST00000512107 ATP10BO94823 1461 aa23.3■■□□□ 1.32
MATR3-238ENST00000512107 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
MATR3-238ENST00000512107 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
MATR3-238ENST00000512107 VPS8Q8N3P4 1428 aa23.26■■□□□ 1.31
MATR3-238ENST00000512107 HECW1Q76N89 1606 aa23.24■■□□□ 1.31
MATR3-238ENST00000512107 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
MATR3-238ENST00000512107 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
MATR3-238ENST00000512107 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
MATR3-238ENST00000512107 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
MATR3-238ENST00000512107 MAPKBP1O60336 1514 aa23.16■■□□□ 1.3
MATR3-238ENST00000512107 MAGI3Q5TCQ9 1506 aa23.16■■□□□ 1.3
MATR3-238ENST00000512107 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
MATR3-238ENST00000512107 NPM1P06748 294 aaKnown RBP eCLIP23.13■■□□□ 1.29
MATR3-238ENST00000512107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.09■■□□□ 1.29
MATR3-238ENST00000512107 HNRNPUL2Q1KMD3 747 aaKnown RBP23.09■■□□□ 1.29
MATR3-238ENST00000512107 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
MATR3-238ENST00000512107 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
MATR3-238ENST00000512107 CCDC18Q5T9S5 1454 aa23.06■■□□□ 1.28
MATR3-238ENST00000512107 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
MATR3-238ENST00000512107 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
MATR3-238ENST00000512107 DIP2BQ9P265 1576 aa23.04■■□□□ 1.28
MATR3-238ENST00000512107 KANK4Q5T7N3 995 aaPredicted RBP23.02■■□□□ 1.28
MATR3-238ENST00000512107 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
MATR3-238ENST00000512107 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
MATR3-238ENST00000512107 KIF14Q15058 1648 aa23.01■■□□□ 1.27
MATR3-238ENST00000512107 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
MATR3-238ENST00000512107 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
MATR3-238ENST00000512107 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
MATR3-238ENST00000512107 FAM69CQ0P6D2 419 aa22.95■■□□□ 1.26
MATR3-238ENST00000512107 GLI2P10070 1586 aa22.94■■□□□ 1.26
MATR3-238ENST00000512107 TTC37Q6PGP7 1564 aa22.94■■□□□ 1.26
MATR3-238ENST00000512107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.94■■□□□ 1.262e-7■□□□□ 10.6
MATR3-238ENST00000512107 LRRC9Q6ZRR7 1453 aa22.94■■□□□ 1.26
MATR3-238ENST00000512107 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
MATR3-238ENST00000512107 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
MATR3-238ENST00000512107 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
MATR3-238ENST00000512107 MAP3K4Q9Y6R4 1608 aa22.9■■□□□ 1.26
MATR3-238ENST00000512107 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
MATR3-238ENST00000512107 CDK11AQ9UQ88 783 aaPredicted RBP22.89■■□□□ 1.25
MATR3-238ENST00000512107 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
MATR3-238ENST00000512107 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
MATR3-238ENST00000512107 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
MATR3-238ENST00000512107 CDC42BPAQ5VT25 1732 aa22.81■■□□□ 1.24
MATR3-238ENST00000512107 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
MATR3-238ENST00000512107 SUPT6HQ7KZ85 1726 aaKnown RBP22.8■■□□□ 1.24
MATR3-238ENST00000512107 APLP2Q06481 763 aa22.8■■□□□ 1.24
MATR3-238ENST00000512107 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
MATR3-238ENST00000512107 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
MATR3-238ENST00000512107 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
MATR3-238ENST00000512107 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
MATR3-238ENST00000512107 PLCH2O75038 1416 aa22.74■■□□□ 1.23
MATR3-238ENST00000512107 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
MATR3-238ENST00000512107 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
MATR3-238ENST00000512107 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms