RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CUX1P39880 1505 aa3.71□□□□□ -1.81
TRAPPC13-211ENST00000512009 LRRIQ1Q96JM4 1722 aa3.71□□□□□ -1.81
TRAPPC13-211ENST00000512009 CEP170Q5SW79 1584 aa3.71□□□□□ -1.82
TRAPPC13-211ENST00000512009 ZNF142P52746 1687 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-211ENST00000512009 MROH2AA6NES4 1674 aa3.71□□□□□ -1.82
TRAPPC13-211ENST00000512009 ABCA9Q8IUA7 1624 aa3.71□□□□□ -1.82
TRAPPC13-211ENST00000512009 FANCD2Q9BXW9 1451 aa3.7□□□□□ -1.82
TRAPPC13-211ENST00000512009 EPRSP07814 1512 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-211ENST00000512009 RICTORQ6R327 1708 aa3.7□□□□□ -1.82
TRAPPC13-211ENST00000512009 SYNJ1O43426 1573 aa3.7□□□□□ -1.82
TRAPPC13-211ENST00000512009 CEP164Q9UPV0 1460 aa3.7□□□□□ -1.82
TRAPPC13-211ENST00000512009 LMTK3Q96Q04 1460 aa3.69□□□□□ -1.82
TRAPPC13-211ENST00000512009 SYNJ2O15056 1496 aa3.69□□□□□ -1.82
TRAPPC13-211ENST00000512009 ABCA8O94911 1581 aa3.69□□□□□ -1.82
TRAPPC13-211ENST00000512009 MAGI3Q5TCQ9 1506 aa3.69□□□□□ -1.82
TRAPPC13-211ENST00000512009 PRAG1Q86YV5 1406 aa3.68□□□□□ -1.82
TRAPPC13-211ENST00000512009 SIGLEC1Q9BZZ2 1709 aa3.67□□□□□ -1.82
TRAPPC13-211ENST00000512009 KDM5CP41229 1560 aa3.67□□□□□ -1.82
TRAPPC13-211ENST00000512009 TTC37Q6PGP7 1564 aa3.67□□□□□ -1.82
TRAPPC13-211ENST00000512009 COL24A1Q17RW2 1714 aa3.66□□□□□ -1.82
TRAPPC13-211ENST00000512009 ERCC6L2Q5T890 1561 aa3.66□□□□□ -1.82
TRAPPC13-211ENST00000512009 ABCC10Q5T3U5 1492 aa3.66□□□□□ -1.82
TRAPPC13-211ENST00000512009 ALKQ9UM73 1620 aa3.65□□□□□ -1.82
TRAPPC13-211ENST00000512009 WDR7Q9Y4E6 1490 aa3.65□□□□□ -1.83
TRAPPC13-211ENST00000512009 AGLP35573 1532 aa3.64□□□□□ -1.83
TRAPPC13-211ENST00000512009 PLXNC1O60486 1568 aa3.64□□□□□ -1.83
TRAPPC13-211ENST00000512009 KIF14Q15058 1648 aa3.63□□□□□ -1.83
TRAPPC13-211ENST00000512009 CCDC88BA6NC98 1476 aa3.63□□□□□ -1.83
TRAPPC13-211ENST00000512009 ABCC2Q92887 1545 aa3.62□□□□□ -1.83
TRAPPC13-211ENST00000512009 GRIN2AQ12879 1464 aa3.62□□□□□ -1.83
TRAPPC13-211ENST00000512009 GRIN2BQ13224 1484 aa3.62□□□□□ -1.83
TRAPPC13-211ENST00000512009 RAPGEF6Q8TEU7 1601 aa3.61□□□□□ -1.83
TRAPPC13-211ENST00000512009 CTTNBP2Q8WZ74 1663 aa3.61□□□□□ -1.83
TRAPPC13-211ENST00000512009 SNAPC4Q5SXM2 1469 aa3.61□□□□□ -1.83
TRAPPC13-211ENST00000512009 STRCQ7RTU9 1775 aa3.61□□□□□ -1.83
TRAPPC13-211ENST00000512009 DISP1Q96F81 1524 aa3.6□□□□□ -1.83
TRAPPC13-211ENST00000512009 IQGAP2Q13576 1575 aa3.6□□□□□ -1.83
TRAPPC13-211ENST00000512009 ERCC6Q03468 1493 aa3.58□□□□□ -1.84
TRAPPC13-211ENST00000512009 ARHGEF12Q9NZN5 1544 aa3.58□□□□□ -1.84
TRAPPC13-211ENST00000512009 GOLGB1Q14789 3259 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-211ENST00000512009 ARHGEF40Q8TER5 1519 aa3.57□□□□□ -1.84
TRAPPC13-211ENST00000512009 KDM5DQ9BY66 1539 aa3.57□□□□□ -1.84
TRAPPC13-211ENST00000512009 NEURL4Q96JN8 1562 aa3.56□□□□□ -1.84
TRAPPC13-211ENST00000512009 PRXQ9BXM0 1461 aa3.56□□□□□ -1.84
TRAPPC13-211ENST00000512009 DEPDC5O75140 1603 aa3.56□□□□□ -1.84
TRAPPC13-211ENST00000512009 VWDEQ8N2E2 1590 aa3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 PTPN23Q9H3S7 1636 aa3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 ZNF518AQ6AHZ1 1483 aa3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 AQRO60306 1485 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 DENND4BO75064 1496 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 PHLDB1Q86UU1 1377 aa3.55□□□□□ -1.84
TRAPPC13-211ENST00000512009 ZC3H13Q5T200 1668 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-211ENST00000512009 FHAD1B1AJZ9 1412 aa3.54□□□□□ -1.84
TRAPPC13-211ENST00000512009 PLB1Q6P1J6 1458 aa3.54□□□□□ -1.84
TRAPPC13-211ENST00000512009 LTBP4Q8N2S1 1624 aa3.54□□□□□ -1.84
TRAPPC13-211ENST00000512009 MAGI2Q86UL8 1455 aa3.54□□□□□ -1.84
TRAPPC13-211ENST00000512009 MROH1Q8NDA8 1641 aa3.53□□□□□ -1.84
TRAPPC13-211ENST00000512009 SETD1BQ9UPS6 1966 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-211ENST00000512009 FGD5Q6ZNL6 1462 aa3.53□□□□□ -1.84
TRAPPC13-211ENST00000512009 XIRP1Q702N8 1843 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-211ENST00000512009 FHOD3Q2V2M9 1422 aa3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 RNF17Q9BXT8 1623 aaKnown RBP3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 NCOA2Q15596 1464 aa3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 INO80Q9ULG1 1556 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 ZCCHC11Q5TAX3 1644 aaKnown RBP3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 MAST1Q9Y2H9 1570 aa3.52□□□□□ -1.85
TRAPPC13-211ENST00000512009 ABCA6Q8N139 1617 aa3.51□□□□□ -1.85
TRAPPC13-211ENST00000512009 CFAP74Q9C0B2 1584 aa3.51□□□□□ -1.85
TRAPPC13-211ENST00000512009 MADDQ8WXG6 1647 aa3.51□□□□□ -1.85
TRAPPC13-211ENST00000512009 TMEM131LA2VDJ0 1609 aa3.51□□□□□ -1.85
TRAPPC13-211ENST00000512009 USP34Q70CQ2 3546 aa3.5□□□□□ -1.85
TRAPPC13-211ENST00000512009 NEO1Q92859 1461 aa3.5□□□□□ -1.85
TRAPPC13-211ENST00000512009 PREX1Q8TCU6 1659 aa3.5□□□□□ -1.85
TRAPPC13-211ENST00000512009 KIF21BO75037 1637 aa3.49□□□□□ -1.85
TRAPPC13-211ENST00000512009 CROCC2H7BZ55 1655 aa3.49□□□□□ -1.85
TRAPPC13-211ENST00000512009 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
TRAPPC13-211ENST00000512009 NWD1Q149M9 1564 aa3.49□□□□□ -1.85
TRAPPC13-211ENST00000512009 GAPVD1Q14C86 1478 aa3.49□□□□□ -1.85
TRAPPC13-211ENST00000512009 EIF2AK4Q9P2K8 1649 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-211ENST00000512009 UTRNP46939 3433 aa3.47□□□□□ -1.85
TRAPPC13-211ENST00000512009 SETD1AO15047 1707 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-211ENST00000512009 USP54Q70EL1 1684 aa3.47□□□□□ -1.85
TRAPPC13-211ENST00000512009 MAP3K1Q13233 1512 aa3.47□□□□□ -1.85
TRAPPC13-211ENST00000512009 SYNMO15061 1565 aa3.46□□□□□ -1.85
TRAPPC13-211ENST00000512009 PIK3C2BO00750 1634 aa3.46□□□□□ -1.86
TRAPPC13-211ENST00000512009 CEP170BQ9Y4F5 1589 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC13-211ENST00000512009 TCOF1Q13428 1488 aaKnown RBP3.46□□□□□ -1.86
TRAPPC13-211ENST00000512009 EFCAB5A4FU69 1503 aa3.45□□□□□ -1.86
TRAPPC13-211ENST00000512009 MED14O60244 1454 aa3.45□□□□□ -1.86
TRAPPC13-211ENST00000512009 PLA2R1Q13018 1463 aa3.45□□□□□ -1.86
TRAPPC13-211ENST00000512009 PCNTO95613 3336 aa3.45□□□□□ -1.86
TRAPPC13-211ENST00000512009 KIDINS220Q9ULH0 1771 aa3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 PREX2Q70Z35 1606 aa3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 WRNQ14191 1432 aaPredicted RBP eCLIP3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 ITSN2Q9NZM3 1697 aa3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 CDC42BPBQ9Y5S2 1711 aa3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 RGPD3A6NKT7 1758 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 RGPD4Q7Z3J3 1758 aa3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 POLR1AO95602 1720 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-211ENST00000512009 SPHKAPQ2M3C7 1700 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms