RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB28-207ENST00000511649 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
RAB28-207ENST00000511649 CUX2O14529 1486 aa12.64□□□□□ -0.39
RAB28-207ENST00000511649 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
RAB28-207ENST00000511649 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
RAB28-207ENST00000511649 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
RAB28-207ENST00000511649 WIZO95785 1651 aa12.57□□□□□ -0.4
RAB28-207ENST00000511649 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
RAB28-207ENST00000511649 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
RAB28-207ENST00000511649 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
RAB28-207ENST00000511649 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
RAB28-207ENST00000511649 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
RAB28-207ENST00000511649 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
RAB28-207ENST00000511649 EVX2Q03828 476 aa12.5□□□□□ -0.41
RAB28-207ENST00000511649 MIER1Q8N108 512 aa12.48□□□□□ -0.41
RAB28-207ENST00000511649 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
RAB28-207ENST00000511649 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
RAB28-207ENST00000511649 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
RAB28-207ENST00000511649 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
RAB28-207ENST00000511649 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
RAB28-207ENST00000511649 WDR62O43379 1518 aa12.39□□□□□ -0.43
RAB28-207ENST00000511649 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
RAB28-207ENST00000511649 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
RAB28-207ENST00000511649 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
RAB28-207ENST00000511649 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
RAB28-207ENST00000511649 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
RAB28-207ENST00000511649 LHX8Q68G74 356 aa12.34□□□□□ -0.43
RAB28-207ENST00000511649 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
RAB28-207ENST00000511649 CFTRP13569 1480 aa12.33□□□□□ -0.44
RAB28-207ENST00000511649 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
RAB28-207ENST00000511649 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
RAB28-207ENST00000511649 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
RAB28-207ENST00000511649 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB28-207ENST00000511649 URB2Q14146 1524 aaKnown RBP12.28□□□□□ -0.44
RAB28-207ENST00000511649 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
RAB28-207ENST00000511649 GABBR2O75899 941 aa12.24□□□□□ -0.45
RAB28-207ENST00000511649 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
RAB28-207ENST00000511649 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
RAB28-207ENST00000511649 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
RAB28-207ENST00000511649 NUBP1P53384 320 aa12.2□□□□□ -0.46
RAB28-207ENST00000511649 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
RAB28-207ENST00000511649 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
RAB28-207ENST00000511649 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
RAB28-207ENST00000511649 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
RAB28-207ENST00000511649 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
RAB28-207ENST00000511649 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
RAB28-207ENST00000511649 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
RAB28-207ENST00000511649 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
RAB28-207ENST00000511649 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
RAB28-207ENST00000511649 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
RAB28-207ENST00000511649 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
RAB28-207ENST00000511649 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
RAB28-207ENST00000511649 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
RAB28-207ENST00000511649 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
RAB28-207ENST00000511649 GSE1Q14687 1217 aa12.04□□□□□ -0.48
RAB28-207ENST00000511649 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
RAB28-207ENST00000511649 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
RAB28-207ENST00000511649 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
RAB28-207ENST00000511649 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
RAB28-207ENST00000511649 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
RAB28-207ENST00000511649 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
RAB28-207ENST00000511649 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
RAB28-207ENST00000511649 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
RAB28-207ENST00000511649 CHD1O14646 1710 aa11.98□□□□□ -0.49
RAB28-207ENST00000511649 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
RAB28-207ENST00000511649 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAB28-207ENST00000511649 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
RAB28-207ENST00000511649 CLCN6P51797 869 aa11.96□□□□□ -0.49
RAB28-207ENST00000511649 CUX1P39880 1505 aa11.95□□□□□ -0.5
RAB28-207ENST00000511649 ARHGEF11O15085 1522 aa11.94□□□□□ -0.5
RAB28-207ENST00000511649 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
RAB28-207ENST00000511649 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
RAB28-207ENST00000511649 PYGBP11216 843 aa11.92□□□□□ -0.5
RAB28-207ENST00000511649 PKD2Q13563 968 aa11.92□□□□□ -0.5
RAB28-207ENST00000511649 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
RAB28-207ENST00000511649 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
RAB28-207ENST00000511649 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
RAB28-207ENST00000511649 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
RAB28-207ENST00000511649 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
RAB28-207ENST00000511649 MAP3K13O43283 966 aa11.87□□□□□ -0.51
RAB28-207ENST00000511649 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
RAB28-207ENST00000511649 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
RAB28-207ENST00000511649 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
RAB28-207ENST00000511649 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
RAB28-207ENST00000511649 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
RAB28-207ENST00000511649 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
RAB28-207ENST00000511649 SOGA1O94964 1423 aa11.85□□□□□ -0.51
RAB28-207ENST00000511649 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
RAB28-207ENST00000511649 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
RAB28-207ENST00000511649 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
RAB28-207ENST00000511649 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
RAB28-207ENST00000511649 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
RAB28-207ENST00000511649 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
RAB28-207ENST00000511649 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
RAB28-207ENST00000511649 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
RAB28-207ENST00000511649 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
RAB28-207ENST00000511649 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
RAB28-207ENST00000511649 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
RAB28-207ENST00000511649 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
RAB28-207ENST00000511649 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms