RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
AP003555.1-202ENST00000511013 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
AP003555.1-202ENST00000511013 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
AP003555.1-202ENST00000511013 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
AP003555.1-202ENST00000511013 NESP48681 1621 aa20.85■□□□□ 0.93
AP003555.1-202ENST00000511013 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
AP003555.1-202ENST00000511013 MIER1Q8N108 512 aa20.81■□□□□ 0.92
AP003555.1-202ENST00000511013 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
AP003555.1-202ENST00000511013 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
AP003555.1-202ENST00000511013 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
AP003555.1-202ENST00000511013 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
AP003555.1-202ENST00000511013 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.92
AP003555.1-202ENST00000511013 URB2Q14146 1524 aaKnown RBP20.76■□□□□ 0.91
AP003555.1-202ENST00000511013 ITGAEP38570 1179 aa20.76■□□□□ 0.91
AP003555.1-202ENST00000511013 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
AP003555.1-202ENST00000511013 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
AP003555.1-202ENST00000511013 SETD5Q9C0A6 1442 aa20.75■□□□□ 0.91
AP003555.1-202ENST00000511013 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
AP003555.1-202ENST00000511013 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
AP003555.1-202ENST00000511013 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
AP003555.1-202ENST00000511013 FHOD3Q2V2M9 1422 aa20.73■□□□□ 0.91
AP003555.1-202ENST00000511013 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
AP003555.1-202ENST00000511013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.71■□□□□ 0.91
AP003555.1-202ENST00000511013 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
AP003555.1-202ENST00000511013 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
AP003555.1-202ENST00000511013 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
AP003555.1-202ENST00000511013 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
AP003555.1-202ENST00000511013 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
AP003555.1-202ENST00000511013 MAPKBP1O60336 1514 aa20.64■□□□□ 0.89
AP003555.1-202ENST00000511013 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
AP003555.1-202ENST00000511013 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
AP003555.1-202ENST00000511013 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
AP003555.1-202ENST00000511013 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
AP003555.1-202ENST00000511013 TIMELESSQ9UNS1 1208 aa20.58■□□□□ 0.89
AP003555.1-202ENST00000511013 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
AP003555.1-202ENST00000511013 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
AP003555.1-202ENST00000511013 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
AP003555.1-202ENST00000511013 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
AP003555.1-202ENST00000511013 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
AP003555.1-202ENST00000511013 SUPT6HQ7KZ85 1726 aaKnown RBP20.48■□□□□ 0.87
AP003555.1-202ENST00000511013 LRRIQ1Q96JM4 1722 aa20.47■□□□□ 0.87
AP003555.1-202ENST00000511013 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
AP003555.1-202ENST00000511013 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
AP003555.1-202ENST00000511013 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
AP003555.1-202ENST00000511013 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
AP003555.1-202ENST00000511013 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
AP003555.1-202ENST00000511013 SIN3AQ96ST3 1273 aa20.41■□□□□ 0.86
AP003555.1-202ENST00000511013 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
AP003555.1-202ENST00000511013 HFM1A2PYH4 1435 aa20.41■□□□□ 0.86
AP003555.1-202ENST00000511013 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
AP003555.1-202ENST00000511013 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
AP003555.1-202ENST00000511013 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
AP003555.1-202ENST00000511013 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
AP003555.1-202ENST00000511013 UGGT2Q9NYU1 1516 aa20.38■□□□□ 0.85
AP003555.1-202ENST00000511013 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
AP003555.1-202ENST00000511013 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
AP003555.1-202ENST00000511013 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
AP003555.1-202ENST00000511013 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
AP003555.1-202ENST00000511013 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
AP003555.1-202ENST00000511013 NAIPQ13075 1403 aa20.32■□□□□ 0.84
AP003555.1-202ENST00000511013 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
AP003555.1-202ENST00000511013 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
AP003555.1-202ENST00000511013 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
AP003555.1-202ENST00000511013 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
AP003555.1-202ENST00000511013 MAGI3Q5TCQ9 1506 aa20.28■□□□□ 0.84
AP003555.1-202ENST00000511013 MIA2Q96PC5 1412 aa20.26■□□□□ 0.83
AP003555.1-202ENST00000511013 WDR62O43379 1518 aa20.25■□□□□ 0.83
AP003555.1-202ENST00000511013 AKNAQ7Z591 1439 aa20.25■□□□□ 0.83
AP003555.1-202ENST00000511013 GCC2Q8IWJ2 1684 aa20.24■□□□□ 0.83
AP003555.1-202ENST00000511013 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
AP003555.1-202ENST00000511013 KIAA0586Q9BVV6 1533 aa20.21■□□□□ 0.83
AP003555.1-202ENST00000511013 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
AP003555.1-202ENST00000511013 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
AP003555.1-202ENST00000511013 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
AP003555.1-202ENST00000511013 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
AP003555.1-202ENST00000511013 CCER2I3L3R5 266 aa20.13■□□□□ 0.81
AP003555.1-202ENST00000511013 DISP1Q96F81 1524 aa20.12■□□□□ 0.81
AP003555.1-202ENST00000511013 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
AP003555.1-202ENST00000511013 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
AP003555.1-202ENST00000511013 ANP32CO43423 234 aa20.11■□□□□ 0.81
AP003555.1-202ENST00000511013 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
AP003555.1-202ENST00000511013 RAPGEF6Q8TEU7 1601 aa20.09■□□□□ 0.81
AP003555.1-202ENST00000511013 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
AP003555.1-202ENST00000511013 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
AP003555.1-202ENST00000511013 ROCK1Q13464 1354 aa20.09■□□□□ 0.81
AP003555.1-202ENST00000511013 KCNH8Q96L42 1107 aa20.08■□□□□ 0.8
AP003555.1-202ENST00000511013 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.8
AP003555.1-202ENST00000511013 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
AP003555.1-202ENST00000511013 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
AP003555.1-202ENST00000511013 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
AP003555.1-202ENST00000511013 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
AP003555.1-202ENST00000511013 DNMT1P26358 1616 aaKnown RBP20.04■□□□□ 0.8
AP003555.1-202ENST00000511013 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
AP003555.1-202ENST00000511013 DAPK1P53355 1430 aa20.04■□□□□ 0.8
AP003555.1-202ENST00000511013 KDM6BO15054 1643 aa20.03■□□□□ 0.8
AP003555.1-202ENST00000511013 DENND4BO75064 1496 aaPredicted RBP20.02■□□□□ 0.8
AP003555.1-202ENST00000511013 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
AP003555.1-202ENST00000511013 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
AP003555.1-202ENST00000511013 ABCC5O15440 1437 aa19.99■□□□□ 0.79
AP003555.1-202ENST00000511013 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms